RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 WWC2Q6AWC2 1192 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 AGMOQ6ZNB7 445 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 GET4Q7L5D6 327 aaPredicted RBP11.41□□□□□ -0.58
CHMP6-203ENST00000572525 SGMS1Q86VZ5 419 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 CHD1LQ86WJ1 897 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 FANCBQ8NB91 859 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 CNNM3Q8NE01 707 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 FGF14Q92915 247 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 FAM193BQ96PV7 902 aaPredicted RBP11.41□□□□□ -0.58
CHMP6-203ENST00000572525 RSAD1Q9HA92 442 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 UBN1Q9NPG3 1134 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 AGPAT5Q9NUQ2 364 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 MARCH5Q9NX47 278 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 CDH7Q9ULB5 785 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 RAB23Q9ULC3 237 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 PIN4Q9Y237 131 aaKnown RBP11.41□□□□□ -0.58
CHMP6-203ENST00000572525 INPP5FQ9Y2H2 1132 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 MRPS17Q9Y2R5 130 aaKnown RBP11.41□□□□□ -0.58
CHMP6-203ENST00000572525 ZMYM2Q9UBW7 1377 aa11.41□□□□□ -0.58
CHMP6-203ENST00000572525 SDK1Q7Z5N4 2213 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 GCN1Q92616 2671 aaKnown RBP11.4□□□□□ -0.58
CHMP6-203ENST00000572525 FAM170BA6NMN3 283 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 MEIS3P2A8K0S8 358 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 ZMYND10O75800 440 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 SSBP05455 408 aaKnown RBP eCLIP11.4□□□□□ -0.58
CHMP6-203ENST00000572525 TDGF1P13385 188 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 FGFR4P22455 802 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 FSHRP23945 695 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 SFNP31947 248 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 CIITAP33076 1130 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 MCM5P33992 734 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 DNM2P50570 870 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 LIMK1P53667 647 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 PRKCEQ02156 737 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 DSC1Q08554 894 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 SNW1Q13573 536 aaKnown RBP11.4□□□□□ -0.58
CHMP6-203ENST00000572525 PPP2R5DQ14738 602 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 ACAP1Q15027 740 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 CSRP2Q16527 193 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 TYW1BQ6NUM6 668 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 RTL10Q7L3V2 364 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 RDM1Q8NG50 284 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 NIFKQ9BYG3 293 aaKnown RBP11.4□□□□□ -0.58
CHMP6-203ENST00000572525 GBP3Q9H0R5 595 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 BARHL2Q9NY43 387 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 PCDHB2Q9Y5E7 798 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 TAF6LQ9Y6J9 622 aa11.4□□□□□ -0.58
CHMP6-203ENST00000572525 ITPR1Q14643 2758 aa11.39□□□□□ -0.59
CHMP6-203ENST00000572525 A0A087WZ62 844 aa11.39□□□□□ -0.59
CHMP6-203ENST00000572525 ESYT2A0FGR8 921 aa11.39□□□□□ -0.59
CHMP6-203ENST00000572525 TGM5O43548 720 aa11.39□□□□□ -0.59
CHMP6-203ENST00000572525 PRC1O43663 620 aa11.39□□□□□ -0.59
CHMP6-203ENST00000572525 GAS2O43903 313 aaKnown RBP11.39□□□□□ -0.59
CHMP6-203ENST00000572525 NUCB1Q02818 461 aa11.39□□□□□ -0.59
CHMP6-203ENST00000572525 PTH1RQ03431 593 aa11.39□□□□□ -0.59
CHMP6-203ENST00000572525 PARM1Q6UWI2 310 aa11.39□□□□□ -0.59
CHMP6-203ENST00000572525 NFXL1Q6ZNB6 911 aa11.39□□□□□ -0.59
CHMP6-203ENST00000572525 COLGALT2Q8IYK4 626 aa11.39□□□□□ -0.59
CHMP6-203ENST00000572525 CMTR1Q8N1G2 835 aaKnown RBP11.39□□□□□ -0.59
CHMP6-203ENST00000572525 MAP4K1Q92918 833 aa11.39□□□□□ -0.59
CHMP6-203ENST00000572525 PGBD1Q96JS3 809 aa11.39□□□□□ -0.59
CHMP6-203ENST00000572525 CEP89Q96ST8 783 aa11.39□□□□□ -0.59
CHMP6-203ENST00000572525 JPH2Q9BR39 696 aaPredicted RBP11.39□□□□□ -0.59
CHMP6-203ENST00000572525 FDXACB1Q9BRP7 624 aaPredicted RBP11.39□□□□□ -0.59
CHMP6-203ENST00000572525 CHRDQ9H2X0 955 aa11.39□□□□□ -0.59
CHMP6-203ENST00000572525 DISC1Q9NRI5 854 aa11.39□□□□□ -0.59
CHMP6-203ENST00000572525 RBM28Q9NW13 759 aaKnown RBP11.39□□□□□ -0.59
CHMP6-203ENST00000572525 TRIP11Q15643 1979 aa11.39□□□□□ -0.59
CHMP6-203ENST00000572525 hCG_1642624A0A1W2PR95 340 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 SMCO2A6NFE2 343 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 C2CD2LO14523 706 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 NCLP19338 710 aaKnown RBP11.38□□□□□ -0.59
CHMP6-203ENST00000572525 TARSP26639 723 aaKnown RBP11.38□□□□□ -0.59
CHMP6-203ENST00000572525 CNR2P34972 360 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 JAK3P52333 1124 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 ADCY1Q08828 1119 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 SPEM2Q0P670 501 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 FZD5Q13467 585 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 PCBP1Q15365 356 aaKnown RBP eCLIP11.38□□□□□ -0.59
CHMP6-203ENST00000572525 USP41Q3LFD5 358 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 XKR3Q5GH77 459 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 ZNF852Q6ZMS4 543 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 PRR23CQ6ZRP0 262 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 CATSPER4Q7RTX7 472 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 DNASE1L2Q92874 299 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 ZNF668Q96K58 619 aaPredicted RBP11.38□□□□□ -0.59
CHMP6-203ENST00000572525 RIT2Q99578 217 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 RPP25Q9BUL9 199 aaKnown RBP11.38□□□□□ -0.59
CHMP6-203ENST00000572525 PHF20Q9BVI0 1012 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 SEMA4GQ9NTN9 838 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 FBXW11Q9UKB1 542 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 KCNH3Q9ULD8 1083 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 MTF2Q9Y483 593 aaPredicted RBP11.38□□□□□ -0.59
CHMP6-203ENST00000572525 SAMM50Q9Y512 469 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 SLC12A7Q9Y666 1083 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 AKAP13Q12802 2813 aa11.38□□□□□ -0.59
CHMP6-203ENST00000572525 EML5Q05BV3 1969 aa11.37□□□□□ -0.59
CHMP6-203ENST00000572525 MAFO75444 373 aaPredicted RBP11.37□□□□□ -0.59
CHMP6-203ENST00000572525 NR1I2O75469 434 aa11.37□□□□□ -0.59
CHMP6-203ENST00000572525 CSDE1O75534 798 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms