RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 VN1R3Q9BXE9 311 aa17.31■□□□□ 0.36
TSR1-202ENST00000571806 NFKBIZQ9BYH8 718 aa17.31■□□□□ 0.36
TSR1-202ENST00000571806 ANKEF1Q9NU02 776 aa17.31■□□□□ 0.36
TSR1-202ENST00000571806 ORC3Q9UBD5 711 aaPredicted RBP17.31■□□□□ 0.36
TSR1-202ENST00000571806 DAXXQ9UER7 740 aaPredicted RBP17.31■□□□□ 0.36
TSR1-202ENST00000571806 IPPQ9Y573 584 aa17.31■□□□□ 0.36
TSR1-202ENST00000571806 POMCP01189 267 aa17.3■□□□□ 0.36
TSR1-202ENST00000571806 ADH1AP07327 375 aa17.3■□□□□ 0.36
TSR1-202ENST00000571806 XRCC6P12956 609 aaKnown RBP eCLIP17.3■□□□□ 0.36
TSR1-202ENST00000571806 CLCN5P51795 746 aa17.3■□□□□ 0.36
TSR1-202ENST00000571806 CTTNQ14247 550 aaKnown RBP17.3■□□□□ 0.36
TSR1-202ENST00000571806 GPR65Q8IYL9 337 aa17.3■□□□□ 0.36
TSR1-202ENST00000571806 SMG8Q8ND04 991 aaKnown RBP17.3■□□□□ 0.36
TSR1-202ENST00000571806 OXER1Q8TDS5 423 aa17.3■□□□□ 0.36
TSR1-202ENST00000571806 HSD17B14Q9BPX1 270 aa17.3■□□□□ 0.36
TSR1-202ENST00000571806 CSRNP2Q9H175 543 aa17.3■□□□□ 0.36
TSR1-202ENST00000571806 MFSD1Q9H3U5 465 aa17.3■□□□□ 0.36
TSR1-202ENST00000571806 TPCN1Q9ULQ1 816 aa17.3■□□□□ 0.36
TSR1-202ENST00000571806 GIT1Q9Y2X7 761 aa17.3■□□□□ 0.36
TSR1-202ENST00000571806 ARL5CA6NH57 179 aa17.29■□□□□ 0.36
TSR1-202ENST00000571806 B4GALT3O60512 393 aa17.29■□□□□ 0.36
TSR1-202ENST00000571806 TSPAN1O60635 241 aa17.29■□□□□ 0.36
TSR1-202ENST00000571806 CYP4A11Q02928 519 aa17.29■□□□□ 0.36
TSR1-202ENST00000571806 ASTLQ6HA08 431 aaPredicted RBP17.29■□□□□ 0.36
TSR1-202ENST00000571806 COLGALT2Q8IYK4 626 aa17.29■□□□□ 0.36
TSR1-202ENST00000571806 HDAC7Q8WUI4 952 aa17.29■□□□□ 0.36
TSR1-202ENST00000571806 STAMQ92783 540 aa17.29■□□□□ 0.36
TSR1-202ENST00000571806 CCDC43Q96MW1 224 aaKnown RBP17.29■□□□□ 0.36
TSR1-202ENST00000571806 RPS6KC1Q96S38 1066 aa17.29■□□□□ 0.36
TSR1-202ENST00000571806 EIF2AK1Q9BQI3 630 aaKnown RBP17.29■□□□□ 0.36
TSR1-202ENST00000571806 HERC2P3Q9BVR0 1158 aa17.29■□□□□ 0.36
TSR1-202ENST00000571806 COLEC11Q9BWP8 271 aa17.29■□□□□ 0.36
TSR1-202ENST00000571806 TRIM6Q9C030 488 aaPredicted RBP17.29■□□□□ 0.36
TSR1-202ENST00000571806 IGSF9Q9P2J2 1179 aa17.29■□□□□ 0.36
TSR1-202ENST00000571806 ZMYM2Q9UBW7 1377 aa17.28■□□□□ 0.36
TSR1-202ENST00000571806 ARID2Q68CP9 1835 aa17.28■□□□□ 0.36
TSR1-202ENST00000571806 PROB1E7EW31 1015 aa17.28■□□□□ 0.36
TSR1-202ENST00000571806 INO80B-WBP1J3KQ70 363 aa17.28■□□□□ 0.36
TSR1-202ENST00000571806 EIF5BO60841 1220 aaKnown RBP17.28■□□□□ 0.36
TSR1-202ENST00000571806 PDGFBP01127 241 aaPredicted RBP17.28■□□□□ 0.36
TSR1-202ENST00000571806 SSBP05455 408 aaKnown RBP eCLIP17.28■□□□□ 0.36
TSR1-202ENST00000571806 ASGR2P07307 311 aa17.28■□□□□ 0.36
TSR1-202ENST00000571806 OR1G1P47890 313 aa17.28■□□□□ 0.36
TSR1-202ENST00000571806 AFF1P51825 1210 aaKnown RBP17.28■□□□□ 0.36
TSR1-202ENST00000571806 AK2P54819 239 aa17.28■□□□□ 0.36
TSR1-202ENST00000571806 DSC1Q08554 894 aa17.28■□□□□ 0.36
TSR1-202ENST00000571806 TDGQ13569 410 aa17.28■□□□□ 0.36
TSR1-202ENST00000571806 CALCRLQ16602 461 aa17.28■□□□□ 0.36
TSR1-202ENST00000571806 KANK3Q6NY19 840 aa17.28■□□□□ 0.36
TSR1-202ENST00000571806 BMP2KQ9NSY1 1161 aaPredicted RBP17.28■□□□□ 0.36
TSR1-202ENST00000571806 DENND4AQ7Z401 1863 aa17.28■□□□□ 0.36
TSR1-202ENST00000571806 MYO10Q9HD67 2058 aa17.28■□□□□ 0.36
TSR1-202ENST00000571806 ZDBF2Q9HCK1 2354 aa17.28■□□□□ 0.36
TSR1-202ENST00000571806 ZBTB39O15060 712 aa17.27■□□□□ 0.36
TSR1-202ENST00000571806 GFRA3O60609 400 aa17.27■□□□□ 0.36
TSR1-202ENST00000571806 CTDNEP1O95476 244 aa17.27■□□□□ 0.36
TSR1-202ENST00000571806 GLUD1P00367 558 aa17.27■□□□□ 0.36
TSR1-202ENST00000571806 ARL2P36404 184 aa17.27■□□□□ 0.36
TSR1-202ENST00000571806 MLH1P40692 756 aa17.27■□□□□ 0.36
TSR1-202ENST00000571806 GLUD2P49448 558 aa17.27■□□□□ 0.36
TSR1-202ENST00000571806 DSG1Q02413 1049 aa17.27■□□□□ 0.36
TSR1-202ENST00000571806 CREMQ03060 361 aa17.27■□□□□ 0.36
TSR1-202ENST00000571806 KIAA0319Q5VV43 1072 aa17.27■□□□□ 0.36
TSR1-202ENST00000571806 RNF168Q8IYW5 571 aaPredicted RBP17.27■□□□□ 0.36
TSR1-202ENST00000571806 TNFRSF25Q93038 417 aa17.27■□□□□ 0.36
TSR1-202ENST00000571806 GAD1Q99259 594 aa17.27■□□□□ 0.36
TSR1-202ENST00000571806 EIF2AQ9BY44 585 aaKnown RBP17.27■□□□□ 0.36
TSR1-202ENST00000571806 PLEKHA4Q9H4M7 779 aa17.27■□□□□ 0.36
TSR1-202ENST00000571806 TTC12Q9H892 705 aaPredicted RBP17.27■□□□□ 0.36
TSR1-202ENST00000571806 RXFP1Q9HBX9 757 aa17.27■□□□□ 0.36
TSR1-202ENST00000571806 XPNPEP1Q9NQW7 623 aa17.27■□□□□ 0.36
TSR1-202ENST00000571806 MAN1C1Q9NR34 630 aa17.27■□□□□ 0.36
TSR1-202ENST00000571806 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.27■□□□□ 0.36
TSR1-202ENST00000571806 GJB4Q9NTQ9 266 aa17.27■□□□□ 0.36
TSR1-202ENST00000571806 MARCH5Q9NX47 278 aa17.27■□□□□ 0.36
TSR1-202ENST00000571806 USP34Q70CQ2 3546 aa17.26■□□□□ 0.35
TSR1-202ENST00000571806 CCDC195A0A1B0GUA6 201 aa17.26■□□□□ 0.35
TSR1-202ENST00000571806 H0Y858 1186 aa17.26■□□□□ 0.35
TSR1-202ENST00000571806 C2CD2LO14523 706 aa17.26■□□□□ 0.35
TSR1-202ENST00000571806 TEX28O15482 410 aa17.26■□□□□ 0.35
TSR1-202ENST00000571806 NEMFO60524 1076 aa17.26■□□□□ 0.35
TSR1-202ENST00000571806 EFEMP2O95967 443 aa17.26■□□□□ 0.35
TSR1-202ENST00000571806 MBTD1Q05BQ5 628 aa17.26■□□□□ 0.35
TSR1-202ENST00000571806 NR5A1Q13285 461 aa17.26■□□□□ 0.35
TSR1-202ENST00000571806 TRIM29Q14134 588 aa17.26■□□□□ 0.35
TSR1-202ENST00000571806 EARS2Q5JPH6 523 aaKnown RBP17.26■□□□□ 0.35
TSR1-202ENST00000571806 SLC27A1Q6PCB7 646 aa17.26■□□□□ 0.35
TSR1-202ENST00000571806 TMEM105Q8N8V8 129 aa17.26■□□□□ 0.35
TSR1-202ENST00000571806 NXPE3Q969Y0 559 aa17.26■□□□□ 0.35
TSR1-202ENST00000571806 PRIMPOLQ96LW4 560 aa17.26■□□□□ 0.35
TSR1-202ENST00000571806 KCNK12Q9HB15 430 aa17.26■□□□□ 0.35
TSR1-202ENST00000571806 WDR6Q9NNW5 1121 aaKnown RBP17.26■□□□□ 0.35
TSR1-202ENST00000571806 CHST7Q9NS84 486 aa17.26■□□□□ 0.35
TSR1-202ENST00000571806 PRG3Q9Y2Y8 225 aaPredicted RBP17.26■□□□□ 0.35
TSR1-202ENST00000571806 A0A1B0GUA9 196 aa17.25■□□□□ 0.35
TSR1-202ENST00000571806 PAPLNO95428 1278 aa17.25■□□□□ 0.35
TSR1-202ENST00000571806 FDPSP14324 419 aaKnown RBP17.25■□□□□ 0.35
TSR1-202ENST00000571806 ARF4P18085 180 aaPredicted RBP17.25■□□□□ 0.35
TSR1-202ENST00000571806 RARRES1P49788 294 aa17.25■□□□□ 0.35
TSR1-202ENST00000571806 SCNN1GP51170 649 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms