RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 NUP62CLQ9H1M0 184 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 VPS33BQ9H267 617 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 BHMT2Q9H2M3 363 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 SP110Q9HB58 689 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 ARFGAP3Q9NP61 516 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 RTEL1Q9NZ71 1219 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 PPARGC1AQ9UBK2 798 aaKnown RBP3.8□□□□□ -1.8
CNOT1-221ENST00000569924 KCNG1Q9UIX4 513 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 TPX2Q9ULW0 747 aaKnown RBP3.8□□□□□ -1.8
CNOT1-221ENST00000569924 LRCH1Q9Y2L9 728 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 DAGLAQ9Y4D2 1042 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 PCDHGB3Q9Y5G1 929 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 TIMM13Q9Y5L4 95 aaPredicted RBP3.8□□□□□ -1.8
CNOT1-221ENST00000569924 LAMB4A4D0S4 1761 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 THSD7BQ9C0I4 1608 aa3.8□□□□□ -1.8
CNOT1-221ENST00000569924 RNF123Q5XPI4 1314 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 MAP3K15Q6ZN16 1313 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 WDR33Q9C0J8 1336 aaKnown RBP3.79□□□□□ -1.8
CNOT1-221ENST00000569924 SHISA3A0PJX4 238 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 PRAMEF22A3QJZ6 481 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 LCHNA4D1U4 455 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 SHISA8B8ZZ34 492 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 RBAK-RBAKDNI3L0D1 243 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 ZNF500O60304 480 aaPredicted RBP3.79□□□□□ -1.8
CNOT1-221ENST00000569924 HIP1RO75146 1068 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 ZNF205O95201 554 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 GSTM1P09488 218 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 HSPA8P11142 646 aaKnown RBP3.79□□□□□ -1.8
CNOT1-221ENST00000569924 OSMP13725 252 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 SNRPBP14678 240 aaKnown RBP3.79□□□□□ -1.8
CNOT1-221ENST00000569924 KRT15P19012 456 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 RAB6AP20340 208 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 PTX3P26022 381 aaPredicted RBP3.79□□□□□ -1.8
CNOT1-221ENST00000569924 PEX2P28328 305 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 GRK6P43250 576 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 PIP4K2AP48426 406 aaPredicted RBP3.79□□□□□ -1.8
CNOT1-221ENST00000569924 FXR1P51114 621 aaKnown RBP eCLIP3.79□□□□□ -1.82e-7■■■■□ 21.3
CNOT1-221ENST00000569924 USP11P51784 963 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 LBX1P52954 281 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 GEMIN4P57678 1058 aaKnown RBP3.79□□□□□ -1.8
CNOT1-221ENST00000569924 KIF23Q02241 960 aaPredicted RBP3.79□□□□□ -1.8
CNOT1-221ENST00000569924 ALDH6A1Q02252 535 aaKnown RBP3.79□□□□□ -1.8
CNOT1-221ENST00000569924 DDX10Q13206 875 aaKnown RBP3.79□□□□□ -1.8
CNOT1-221ENST00000569924 MOGSQ13724 837 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 KCTD2Q14681 263 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 TAF7Q15545 349 aaPredicted RBP3.79□□□□□ -1.8
CNOT1-221ENST00000569924 HLFQ16534 295 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 IFI16Q16666 785 aaKnown RBP3.79□□□□□ -1.8
CNOT1-221ENST00000569924 PGS1Q32NB8 556 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 UAP1L1Q3KQV9 507 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 TOR2AQ5JU69 321 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 DACT2Q5SW24 774 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 HYIQ5T013 277 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 SFRP5Q5T4F7 317 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 RNF220Q5VTB9 566 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 JAKMIP3Q5VZ66 844 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 MBLAC2Q68D91 279 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 ZNF280DQ6N043 979 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 CC2D1AQ6P1N0 951 aaPredicted RBP3.79□□□□□ -1.8
CNOT1-221ENST00000569924 MZT2AQ6P582 158 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 CCDC174Q6PII3 467 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 OLFM4Q6UX06 510 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 NPNTQ6UXI9 565 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 MCM10Q7L590 875 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.79□□□□□ -1.8
CNOT1-221ENST00000569924 KCNK18Q7Z418 384 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 NOSTRINQ8IVI9 506 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 FMR1NBQ8N0W7 255 aaPredicted RBP3.79□□□□□ -1.8
CNOT1-221ENST00000569924 OR2C3Q8N628 320 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 GPR161Q8N6U8 529 aaKnown RBP3.79□□□□□ -1.8
CNOT1-221ENST00000569924 PIWIL2Q8TC59 973 aaKnown RBP3.79□□□□□ -1.8
CNOT1-221ENST00000569924 DLG3Q92796 817 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 ACDQ96AP0 544 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 TCTN2Q96GX1 697 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 ABHD8Q96I13 439 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 RIPOR3Q96MK2 946 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 NEUROD6Q96NK8 337 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 CRAMP1Q96RY5 1269 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 ISCA1Q9BUE6 129 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 APOL5Q9BWW9 433 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 JAM3Q9BX67 310 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 MRPL18Q9H0U6 180 aaKnown RBP3.79□□□□□ -1.8
CNOT1-221ENST00000569924 SEMA6CQ9H3T2 930 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 AGO4Q9HCK5 861 aaKnown RBP3.79□□□□□ -1.8
CNOT1-221ENST00000569924 PDLIM7Q9NR12 457 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 SAGE1Q9NXZ1 904 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 CLDND1Q9NY35 253 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 USP36Q9P275 1121 aaKnown RBP3.79□□□□□ -1.8
CNOT1-221ENST00000569924 ADGRE2Q9UHX3 823 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 SERPINB13Q9UIV8 391 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 TUBD1Q9UJT1 453 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 FBXL7Q9UJT9 491 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 ABT1Q9ULW3 272 aaKnown RBP3.79□□□□□ -1.8
CNOT1-221ENST00000569924 B3GALT1Q9Y5Z6 326 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 NUP98P52948 1817 aa3.79□□□□□ -1.8
CNOT1-221ENST00000569924 LTBP1Q14766 1721 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 ABCC12Q96J65 1359 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 COL4A5P29400 1685 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 ERBB4Q15303 1308 aa3.78□□□□□ -1.8
CNOT1-221ENST00000569924 TRPM7Q96QT4 1865 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms