RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ORC4O43929 436 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 RHOBTB1O94844 696 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 FGRP09769 529 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 IFIT2P09913 472 aaKnown RBP7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 GOLGA8HP0CJ92 632 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 KLRC1P26715 233 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 HOXA13P31271 388 aaPredicted RBP7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 ABCG1P45844 678 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 CCR10P46092 362 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 NTHL1P78549 312 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 SEMA3BQ13214 749 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 ELF2Q15723 593 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 DGKKQ5KSL6 1271 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 Q6ZS52 159 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 MAP4K3Q8IVH8 894 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 ITFG1Q8TB96 612 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 MSANTD3Q96H12 275 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 PCYT2Q99447 389 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 BRD9Q9H8M2 597 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 ZNF334Q9HCZ1 680 aaPredicted RBP7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 DNAJB4Q9UDY4 337 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 KCNH3Q9ULD8 1083 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 EXOC6BQ9Y2D4 811 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 PIAS3Q9Y6X2 628 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 PTPRDP23468 1912 aa7.6□□□□□ -1.19
HERPUD1-217ENST00000569429 CCDC194A0A1B0GVG4 234 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 FAM205CA6NFA0 338 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 GPR32O75388 356 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 EFEMP2O95967 443 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 HNRNPA1P09651 372 aaKnown RBP eCLIP7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 KCNA2P16389 499 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 CCNE1P24864 410 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 HOXA9P31269 272 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 GLUD2P49448 558 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 IRX4P78413 519 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 DSG1Q02413 1049 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 RNASELQ05823 741 aaKnown RBP7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 HNRNPDQ14103 355 aaKnown RBP7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 KIZQ2M2Z5 673 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 HSP90AB4PQ58FF6 505 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 COLEC12Q5KU26 742 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 TANGO2Q6ICL3 276 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 PLPPR4Q7Z2D5 763 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 PALB2Q86YC2 1186 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 GPR65Q8IYL9 337 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 SYNPOQ8N3V7 929 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 MBOAT7Q96N66 472 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 TMEM175Q9BSA9 504 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 AMNQ9BXJ7 453 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 NAPBQ9H115 298 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 RBM12Q9NTZ6 932 aaKnown RBP7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 DACT1Q9NYF0 836 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 KCNK4Q9NYG8 393 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 RTEL1Q9NZ71 1219 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 GDE1Q9NZC3 331 aa7.59□□□□□ -1.19
HERPUD1-217ENST00000569429 MUC22E2RYF6 1773 aaPredicted RBP7.59□□□□□ -1.2
HERPUD1-217ENST00000569429 BSNQ9UPA5 3926 aa7.59□□□□□ -1.2
HERPUD1-217ENST00000569429 COL5A1P20908 1838 aaPredicted RBP7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 GCOM1H8Y6P7 765 aaPredicted RBP7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 MEFVO15553 781 aaPredicted RBP7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 B4GALT3O60512 393 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 ATP9AO75110 1047 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 ALDH2P05091 517 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 POU2F2P09086 479 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 POLR2MP0CAP2 368 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 CSRP3P50461 194 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 FAM193AP78312 1265 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 CTDSPL2Q05D32 466 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 SLFN5Q08AF3 891 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 LMAN2Q12907 356 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 NOMO2Q5JPE7 1267 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 WDR44Q5JSH3 913 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 RRP12Q5JTH9 1297 aaKnown RBP7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 PCSK4Q6UW60 755 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 AGMOQ6ZNB7 445 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 TAS1R1Q7RTX1 841 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 FCHSD1Q86WN1 690 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 FAM181AQ8N9Y4 354 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 TRMT61BQ9BVS5 477 aaKnown RBP7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 TRAIPQ9BWF2 469 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 AZI2Q9H6S1 392 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 JMJD4Q9H9V9 463 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 FNIP2Q9P278 1114 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 EVLQ9UI08 416 aaPredicted RBP7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 ANAPC4Q9UJX5 808 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 FAN1Q9Y2M0 1017 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 PCDHB15Q9Y5E8 787 aa7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 SETD2Q9BYW2 2564 aaPredicted RBP7.58□□□□□ -1.2
HERPUD1-217ENST00000569429 MYO18AQ92614 2054 aaKnown RBP7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 TEX51A0A1B0GUA7 166 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 PATE3B3GLJ2 98 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 B8ZZF3 427 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 PYCARD-AS1I3L0S3 204 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 M0R2C6 588 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 NRP1O14786 923 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 EXTL3O43909 919 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 OFD1O75665 1012 aa7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 ZFYP08048 801 aaPredicted RBP7.57□□□□□ -1.2
HERPUD1-217ENST00000569429 TRIM27P14373 513 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms