RNA–Protein interactions for RNA: ENST00000568488.5

CLK3-223, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-223ENST00000568488 DSG1Q02413 1049 aa18.18■□□□□ 0.5
CLK3-223ENST00000568488 SPEM2Q0P670 501 aa18.18■□□□□ 0.5
CLK3-223ENST00000568488 TARBP2Q15633 366 aaKnown RBP18.18■□□□□ 0.5
CLK3-223ENST00000568488 LPAL2Q16609 132 aa18.18■□□□□ 0.5
CLK3-223ENST00000568488 ZBTB41Q5SVQ8 909 aa18.18■□□□□ 0.5
CLK3-223ENST00000568488 TTC22Q5TAA0 569 aa18.18■□□□□ 0.5
CLK3-223ENST00000568488 GRASPQ7Z6J2 395 aaPredicted RBP18.18■□□□□ 0.5
CLK3-223ENST00000568488 MRPL10Q7Z7H8 261 aaKnown RBP18.18■□□□□ 0.5
CLK3-223ENST00000568488 CRYGNQ8WXF5 182 aa18.18■□□□□ 0.5
CLK3-223ENST00000568488 OSBPL6Q9BZF3 934 aa18.18■□□□□ 0.5
CLK3-223ENST00000568488 CDH7Q9ULB5 785 aa18.18■□□□□ 0.5
CLK3-223ENST00000568488 RAB23Q9ULC3 237 aa18.18■□□□□ 0.5
CLK3-223ENST00000568488 COL4A3Q01955 1670 aa18.18■□□□□ 0.5
CLK3-223ENST00000568488 CNTNAP2Q9UHC6 1331 aa18.18■□□□□ 0.5
CLK3-223ENST00000568488 MAGEA9P43362 315 aa18.17■□□□□ 0.5
CLK3-223ENST00000568488 NTHL1P78549 312 aa18.17■□□□□ 0.5
CLK3-223ENST00000568488 RTN1Q16799 776 aa18.17■□□□□ 0.5
CLK3-223ENST00000568488 COLGALT2Q8IYK4 626 aa18.17■□□□□ 0.5
CLK3-223ENST00000568488 AGPAT5Q9NUQ2 364 aa18.17■□□□□ 0.5
CLK3-223ENST00000568488 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.17■□□□□ 0.5
CLK3-223ENST00000568488 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.16■□□□□ 0.5
CLK3-223ENST00000568488 F8W810 466 aa18.16■□□□□ 0.5
CLK3-223ENST00000568488 ADAMTS3O15072 1205 aa18.16■□□□□ 0.5
CLK3-223ENST00000568488 NCAM2O15394 837 aa18.16■□□□□ 0.5
CLK3-223ENST00000568488 NR1I2O75469 434 aa18.16■□□□□ 0.5
CLK3-223ENST00000568488 RPL17P18621 184 aaKnown RBP18.16■□□□□ 0.5
CLK3-223ENST00000568488 PFKPQ01813 784 aa18.16■□□□□ 0.5
CLK3-223ENST00000568488 MTSS1LQ765P7 747 aa18.16■□□□□ 0.5
CLK3-223ENST00000568488 EXOC6Q8TAG9 804 aa18.16■□□□□ 0.5
CLK3-223ENST00000568488 NIFKQ9BYG3 293 aaKnown RBP18.16■□□□□ 0.5
CLK3-223ENST00000568488 IGKV6-21A0A0C4DH24 114 aa18.15■□□□□ 0.5
CLK3-223ENST00000568488 DDX11L8A8MPP1 907 aa18.15■□□□□ 0.5
CLK3-223ENST00000568488 SLC30A4O14863 429 aa18.15■□□□□ 0.5
CLK3-223ENST00000568488 GAS7O60861 476 aa18.15■□□□□ 0.5
CLK3-223ENST00000568488 ZMYND10O75800 440 aa18.15■□□□□ 0.5
CLK3-223ENST00000568488 ITGA4P13612 1032 aa18.15■□□□□ 0.5
CLK3-223ENST00000568488 TARSP26639 723 aaKnown RBP18.15■□□□□ 0.5
CLK3-223ENST00000568488 SFNP31947 248 aa18.15■□□□□ 0.5
CLK3-223ENST00000568488 JAK3P52333 1124 aa18.15■□□□□ 0.5
CLK3-223ENST00000568488 FUT2Q10981 343 aa18.15■□□□□ 0.5
CLK3-223ENST00000568488 XKR3Q5GH77 459 aa18.15■□□□□ 0.5
CLK3-223ENST00000568488 LILRA6Q6PI73 481 aa18.15■□□□□ 0.5
CLK3-223ENST00000568488 APOA5Q6Q788 366 aa18.15■□□□□ 0.5
CLK3-223ENST00000568488 RSPO2Q6UXX9 243 aaPredicted RBP18.15■□□□□ 0.5
CLK3-223ENST00000568488 TPRG1Q6ZUI0 275 aa18.15■□□□□ 0.5
CLK3-223ENST00000568488 SGMS1Q86VZ5 419 aa18.15■□□□□ 0.5
CLK3-223ENST00000568488 RNF168Q8IYW5 571 aaPredicted RBP18.15■□□□□ 0.5
CLK3-223ENST00000568488 NETO1Q8TDF5 533 aa18.15■□□□□ 0.5
CLK3-223ENST00000568488 NELL1Q92832 810 aa18.15■□□□□ 0.5
CLK3-223ENST00000568488 KXD1Q9BQD3 176 aa18.15■□□□□ 0.5
CLK3-223ENST00000568488 COLEC11Q9BWP8 271 aa18.15■□□□□ 0.5
CLK3-223ENST00000568488 UNC45AQ9H3U1 944 aa18.15■□□□□ 0.5
CLK3-223ENST00000568488 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.15■□□□□ 0.5
CLK3-223ENST00000568488 CHST7Q9NS84 486 aa18.15■□□□□ 0.5
CLK3-223ENST00000568488 POLIQ9UNA4 740 aa18.15■□□□□ 0.5
CLK3-223ENST00000568488 MSH4O15457 936 aa18.14■□□□□ 0.49
CLK3-223ENST00000568488 ZBTB43O43298 467 aa18.14■□□□□ 0.49
CLK3-223ENST00000568488 PAPLNO95428 1278 aa18.14■□□□□ 0.49
CLK3-223ENST00000568488 USP41Q3LFD5 358 aa18.14■□□□□ 0.49
CLK3-223ENST00000568488 UBXN11Q5T124 520 aa18.14■□□□□ 0.49
CLK3-223ENST00000568488 LRCH2Q5VUJ6 765 aa18.14■□□□□ 0.49
CLK3-223ENST00000568488 MIER3Q7Z3K6 550 aa18.14■□□□□ 0.49
CLK3-223ENST00000568488 REXO1Q8N1G1 1221 aaKnown RBP18.14■□□□□ 0.49
CLK3-223ENST00000568488 FGF13Q92913 245 aa18.14■□□□□ 0.49
CLK3-223ENST00000568488 GJA10Q969M2 543 aa18.14■□□□□ 0.49
CLK3-223ENST00000568488 LENG9Q96B70 501 aa18.14■□□□□ 0.49
CLK3-223ENST00000568488 GAD1Q99259 594 aa18.14■□□□□ 0.49
CLK3-223ENST00000568488 NELL2Q99435 816 aa18.14■□□□□ 0.49
CLK3-223ENST00000568488 PHF20Q9BVI0 1012 aa18.14■□□□□ 0.49
CLK3-223ENST00000568488 TEKT3Q9BXF9 490 aa18.14■□□□□ 0.49
CLK3-223ENST00000568488 C6orf50Q9HD87 102 aa18.14■□□□□ 0.49
CLK3-223ENST00000568488 UBN1Q9NPG3 1134 aa18.14■□□□□ 0.49
CLK3-223ENST00000568488 FAM217BQ9NTX9 383 aaPredicted RBP18.14■□□□□ 0.49
CLK3-223ENST00000568488 USP24Q9UPU5 2620 aa18.14■□□□□ 0.49
CLK3-223ENST00000568488 PATJQ8NI35 1801 aa18.14■□□□□ 0.49
CLK3-223ENST00000568488 MYH15Q9Y2K3 1946 aa18.13■□□□□ 0.49
CLK3-223ENST00000568488 SLC27A2O14975 620 aa18.13■□□□□ 0.49
CLK3-223ENST00000568488 MAFO75444 373 aaPredicted RBP18.13■□□□□ 0.49
CLK3-223ENST00000568488 C1RP00736 705 aa18.13■□□□□ 0.49
CLK3-223ENST00000568488 SRGAP2CP0DJJ0 459 aa18.13■□□□□ 0.49
CLK3-223ENST00000568488 NCLP19338 710 aaKnown RBP18.13■□□□□ 0.49
CLK3-223ENST00000568488 CIITAP33076 1130 aa18.13■□□□□ 0.49
CLK3-223ENST00000568488 DMWDQ09019 674 aa18.13■□□□□ 0.49
CLK3-223ENST00000568488 PRR23BQ6ZRT6 265 aa18.13■□□□□ 0.49
CLK3-223ENST00000568488 CNNM3Q8NE01 707 aa18.13■□□□□ 0.49
CLK3-223ENST00000568488 CLDN23Q96B33 292 aa18.13■□□□□ 0.49
CLK3-223ENST00000568488 CCDC136Q96JN2 1154 aa18.13■□□□□ 0.49
CLK3-223ENST00000568488 CEP89Q96ST8 783 aa18.13■□□□□ 0.49
CLK3-223ENST00000568488 RIT2Q99578 217 aa18.13■□□□□ 0.49
CLK3-223ENST00000568488 GPR62Q9BZJ7 368 aa18.13■□□□□ 0.49
CLK3-223ENST00000568488 IFT122Q9HBG6 1241 aa18.13■□□□□ 0.49
CLK3-223ENST00000568488 MIOSQ9NXC5 875 aa18.13■□□□□ 0.49
CLK3-223ENST00000568488 FNIP2Q9P278 1114 aa18.13■□□□□ 0.49
CLK3-223ENST00000568488 WDR81Q562E7 1941 aa18.12■□□□□ 0.49
CLK3-223ENST00000568488 ARL5CA6NH57 179 aa18.12■□□□□ 0.49
CLK3-223ENST00000568488 GOLGA8AA7E2F4 631 aa18.12■□□□□ 0.49
CLK3-223ENST00000568488 GOLGA8BA8MQT2 603 aa18.12■□□□□ 0.49
CLK3-223ENST00000568488 STBD1O95210 358 aa18.12■□□□□ 0.49
CLK3-223ENST00000568488 EFEMP2O95967 443 aa18.12■□□□□ 0.49
CLK3-223ENST00000568488 MLH1P40692 756 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms