RNA–Protein interactions for RNA: ENST00000568301.1

COMMD4-223, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-223ENST00000568301 AFF1P51825 1210 aaKnown RBP16.78■□□□□ 0.28
COMMD4-223ENST00000568301 POU5F1BQ06416 359 aa16.78■□□□□ 0.28
COMMD4-223ENST00000568301 SPIRE1Q08AE8 756 aa16.78■□□□□ 0.28
COMMD4-223ENST00000568301 MXD4Q14582 209 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-223ENST00000568301 EMC2Q15006 297 aa16.78■□□□□ 0.28
COMMD4-223ENST00000568301 XKR9Q5GH70 373 aa16.78■□□□□ 0.28
COMMD4-223ENST00000568301 RNF149Q8NC42 400 aa16.78■□□□□ 0.28
COMMD4-223ENST00000568301 OXER1Q8TDS5 423 aa16.78■□□□□ 0.28
COMMD4-223ENST00000568301 NKD2Q969F2 451 aaPredicted RBP16.78■□□□□ 0.28
COMMD4-223ENST00000568301 MRPL17Q9NRX2 175 aaKnown RBP16.78■□□□□ 0.28
COMMD4-223ENST00000568301 SSX2IPQ9Y2D8 614 aa16.78■□□□□ 0.28
COMMD4-223ENST00000568301 C2orf16Q68DN1 1984 aa16.78■□□□□ 0.28
COMMD4-223ENST00000568301 NRP1O14786 923 aa16.77■□□□□ 0.28
COMMD4-223ENST00000568301 INPPL1O15357 1258 aa16.77■□□□□ 0.28
COMMD4-223ENST00000568301 SLITRK3O94933 977 aa16.77■□□□□ 0.28
COMMD4-223ENST00000568301 CLCN4P51793 760 aa16.77■□□□□ 0.28
COMMD4-223ENST00000568301 NCBP1Q09161 790 aaKnown RBP16.77■□□□□ 0.28
COMMD4-223ENST00000568301 C15orf39Q6ZRI6 1047 aa16.77■□□□□ 0.28
COMMD4-223ENST00000568301 OTOP3Q7RTS5 596 aa16.77■□□□□ 0.28
COMMD4-223ENST00000568301 ADSSL1Q8N142 457 aa16.77■□□□□ 0.28
COMMD4-223ENST00000568301 SMG8Q8ND04 991 aaKnown RBP16.77■□□□□ 0.28
COMMD4-223ENST00000568301 WASF1Q92558 559 aa16.77■□□□□ 0.28
COMMD4-223ENST00000568301 ACSF2Q96CM8 615 aaPredicted RBP16.77■□□□□ 0.28
COMMD4-223ENST00000568301 CCDC51Q96ER9 411 aa16.77■□□□□ 0.28
COMMD4-223ENST00000568301 DYDC2Q96IM9 177 aa16.77■□□□□ 0.28
COMMD4-223ENST00000568301 GJB4Q9NTQ9 266 aa16.77■□□□□ 0.28
COMMD4-223ENST00000568301 TPCN1Q9ULQ1 816 aa16.77■□□□□ 0.28
COMMD4-223ENST00000568301 ZBTB39O15060 712 aa16.76■□□□□ 0.27
COMMD4-223ENST00000568301 ERLIN2O94905 339 aa16.76■□□□□ 0.27
COMMD4-223ENST00000568301 LYPLA2O95372 231 aa16.76■□□□□ 0.27
COMMD4-223ENST00000568301 POMCP01189 267 aa16.76■□□□□ 0.27
COMMD4-223ENST00000568301 SOD2P04179 222 aa16.76■□□□□ 0.27
COMMD4-223ENST00000568301 SSBP05455 408 aaKnown RBP eCLIP16.76■□□□□ 0.27
COMMD4-223ENST00000568301 ITGA4P13612 1032 aa16.76■□□□□ 0.27
COMMD4-223ENST00000568301 AOC1P19801 751 aa16.76■□□□□ 0.27
COMMD4-223ENST00000568301 PTENP60484 403 aa16.76■□□□□ 0.27
COMMD4-223ENST00000568301 TDGQ13569 410 aa16.76■□□□□ 0.27
COMMD4-223ENST00000568301 CTTNQ14247 550 aaKnown RBP16.76■□□□□ 0.27
COMMD4-223ENST00000568301 NCAPH2Q6IBW4 605 aa16.76■□□□□ 0.27
COMMD4-223ENST00000568301 NOTUMQ6P988 496 aa16.76■□□□□ 0.27
COMMD4-223ENST00000568301 CCDC149Q6ZUS6 474 aa16.76■□□□□ 0.27
COMMD4-223ENST00000568301 POTEDQ86YR6 584 aa16.76■□□□□ 0.27
COMMD4-223ENST00000568301 IFNLR1Q8IU57 520 aaPredicted RBP16.76■□□□□ 0.27
COMMD4-223ENST00000568301 TPH2Q8IWU9 490 aa16.76■□□□□ 0.27
COMMD4-223ENST00000568301 COLGALT2Q8IYK4 626 aa16.76■□□□□ 0.27
COMMD4-223ENST00000568301 MTRQ99707 1265 aa16.76■□□□□ 0.27
COMMD4-223ENST00000568301 HSD17B14Q9BPX1 270 aa16.76■□□□□ 0.27
COMMD4-223ENST00000568301 KCNK12Q9HB15 430 aa16.76■□□□□ 0.27
COMMD4-223ENST00000568301 PCDHA12Q9UN75 941 aa16.76■□□□□ 0.27
COMMD4-223ENST00000568301 DUSP12Q9UNI6 340 aa16.76■□□□□ 0.27
COMMD4-223ENST00000568301 IPPQ9Y573 584 aa16.76■□□□□ 0.27
COMMD4-223ENST00000568301 TDRD15B5MCY1 1934 aaKnown RBP16.76■□□□□ 0.27
COMMD4-223ENST00000568301 ARL5CA6NH57 179 aa16.75■□□□□ 0.27
COMMD4-223ENST00000568301 SPDYE4A6NLX3 237 aa16.75■□□□□ 0.27
COMMD4-223ENST00000568301 TSPAN1O60635 241 aa16.75■□□□□ 0.27
COMMD4-223ENST00000568301 CTDNEP1O95476 244 aa16.75■□□□□ 0.27
COMMD4-223ENST00000568301 EFEMP2O95967 443 aa16.75■□□□□ 0.27
COMMD4-223ENST00000568301 CYP4A11Q02928 519 aa16.75■□□□□ 0.27
COMMD4-223ENST00000568301 TFDP1Q14186 410 aa16.75■□□□□ 0.27
COMMD4-223ENST00000568301 EARS2Q5JPH6 523 aaKnown RBP16.75■□□□□ 0.27
COMMD4-223ENST00000568301 CYP26C1Q6V0L0 522 aa16.75■□□□□ 0.27
COMMD4-223ENST00000568301 CCDC105Q8IYK2 499 aa16.75■□□□□ 0.27
COMMD4-223ENST00000568301 CMASQ8NFW8 434 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-223ENST00000568301 RPS6KC1Q96S38 1066 aa16.75■□□□□ 0.27
COMMD4-223ENST00000568301 XPNPEP1Q9NQW7 623 aa16.75■□□□□ 0.27
COMMD4-223ENST00000568301 BMP2KQ9NSY1 1161 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-223ENST00000568301 ANKEF1Q9NU02 776 aa16.75■□□□□ 0.27
COMMD4-223ENST00000568301 ORC3Q9UBD5 711 aaPredicted RBP16.75■□□□□ 0.27
COMMD4-223ENST00000568301 DPP7Q9UHL4 492 aa16.75■□□□□ 0.27
COMMD4-223ENST00000568301 MTCL1Q9Y4B5 1905 aaKnown RBP16.74■□□□□ 0.27
COMMD4-223ENST00000568301 NR1I2O75469 434 aa16.74■□□□□ 0.27
COMMD4-223ENST00000568301 DGAT1O75907 488 aa16.74■□□□□ 0.27
COMMD4-223ENST00000568301 C1RP00736 705 aa16.74■□□□□ 0.27
COMMD4-223ENST00000568301 URODP06132 367 aa16.74■□□□□ 0.27
COMMD4-223ENST00000568301 KRT2P35908 639 aa16.74■□□□□ 0.27
COMMD4-223ENST00000568301 ID4P47928 161 aa16.74■□□□□ 0.27
COMMD4-223ENST00000568301 DSC1Q08554 894 aa16.74■□□□□ 0.27
COMMD4-223ENST00000568301 ANKRD1Q15327 319 aa16.74■□□□□ 0.27
COMMD4-223ENST00000568301 ANGPT1Q15389 498 aa16.74■□□□□ 0.27
COMMD4-223ENST00000568301 KIAA0319Q5VV43 1072 aa16.74■□□□□ 0.27
COMMD4-223ENST00000568301 ELMSAN1Q6PJG2 1045 aa16.74■□□□□ 0.27
COMMD4-223ENST00000568301 RNF168Q8IYW5 571 aaPredicted RBP16.74■□□□□ 0.27
COMMD4-223ENST00000568301 SIX5Q8N196 739 aa16.74■□□□□ 0.27
COMMD4-223ENST00000568301 DTWD2Q8NBA8 298 aa16.74■□□□□ 0.27
COMMD4-223ENST00000568301 TNFRSF25Q93038 417 aa16.74■□□□□ 0.27
COMMD4-223ENST00000568301 GAD1Q99259 594 aa16.74■□□□□ 0.27
COMMD4-223ENST00000568301 EIF2AK1Q9BQI3 630 aaKnown RBP16.74■□□□□ 0.27
COMMD4-223ENST00000568301 EIF2AQ9BY44 585 aaKnown RBP16.74■□□□□ 0.27
COMMD4-223ENST00000568301 NFKBIZQ9BYH8 718 aa16.74■□□□□ 0.27
COMMD4-223ENST00000568301 RHOBTB2Q9BYZ6 727 aa16.74■□□□□ 0.27
COMMD4-223ENST00000568301 CSRNP2Q9H175 543 aa16.74■□□□□ 0.27
COMMD4-223ENST00000568301 BRMS1Q9HCU9 246 aa16.74■□□□□ 0.27
COMMD4-223ENST00000568301 MARCH5Q9NX47 278 aa16.74■□□□□ 0.27
COMMD4-223ENST00000568301 FBXL21Q9UKT6 434 aa16.74■□□□□ 0.27
COMMD4-223ENST00000568301 EP300Q09472 2414 aaPredicted RBP16.73■□□□□ 0.27
COMMD4-223ENST00000568301 INO80B-WBP1J3KQ70 363 aa16.73■□□□□ 0.27
COMMD4-223ENST00000568301 NARSO43776 548 aaKnown RBP16.73■□□□□ 0.27
COMMD4-223ENST00000568301 N4BP1O75113 896 aaKnown RBP16.73■□□□□ 0.27
COMMD4-223ENST00000568301 ADH1AP07327 375 aa16.73■□□□□ 0.27
COMMD4-223ENST00000568301 XRCC6P12956 609 aaKnown RBP eCLIP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms