RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 HOXC10Q9NYD6 342 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 TMOD4Q9NZQ9 345 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-218ENST00000568153 CCDC39Q9UFE4 941 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-218ENST00000568153 POLR3KQ9Y2Y1 108 aaPredicted RBP6.91□□□□□ -1.3
CAPN3-218ENST00000568153 CORINQ9Y5Q5 1042 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 MYH1P12882 1939 aa6.91□□□□□ -1.3
CAPN3-218ENST00000568153 LAMB1P07942 1786 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 FER1L6Q2WGJ9 1857 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 CYP3A7-CYP3A51PA0A087WV96 503 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 IQCA1LA6NCM1 817 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 KIAA1324LA8MWY0 1029 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-218ENST00000568153 SMC2O95347 1197 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 ICAM1P05362 532 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 OR52Z1P0C646 297 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 CYP3A7P24462 503 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 ADMP35318 185 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 TECP42680 631 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 TXKP42681 527 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 ZNF165P49910 485 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 PRKG1Q13976 671 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 CALCRLQ16602 461 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 NKG7Q16617 165 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 STX1AQ16623 288 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 TMEM266Q2M3C6 531 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 ANO6Q4KMQ2 910 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 RRAGBQ5VZM2 374 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 USP49Q70CQ1 688 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 PNMA8AQ86V59 439 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-218ENST00000568153 LDHDQ86WU2 507 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 MCF2L2Q86YR7 1114 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 SAMD3Q8N6K7 520 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 PDILTQ8N807 584 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 ZNF507Q8TCN5 953 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 GATA6Q92908 595 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 PAGE5Q96GU1 130 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 MTMR9Q96QG7 549 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 RAB34Q9BZG1 259 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 TANGO6Q9C0B7 1094 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 TGIF2Q9GZN2 237 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 TMEM60Q9H2L4 133 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 RPAP3Q9H6T3 665 aaPredicted RBP6.9□□□□□ -1.3
CAPN3-218ENST00000568153 EHMT1Q9H9B1 1298 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 FBXO28Q9NVF7 368 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 DDX25Q9UHL0 483 aaKnown RBP6.9□□□□□ -1.3
CAPN3-218ENST00000568153 AFG3L2Q9Y4W6 797 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 ABCB11O95342 1321 aa6.9□□□□□ -1.3
CAPN3-218ENST00000568153 SMTNL1A8MU46 457 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 EDIL3O43854 480 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 FLOT1O75955 427 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 CFBP00751 764 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 F13BP05160 661 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 PGRP06401 933 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 CYP3A4P08684 503 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 ERCC5P28715 1186 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-218ENST00000568153 SSTR4P31391 388 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 CCDC173Q0VFZ6 552 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 PAK2Q13177 524 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 CDK5R2Q13319 367 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 PNOCQ13519 176 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 COG2Q14746 738 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 POSTNQ15063 836 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 SEZ6Q53EL9 994 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 MOXD1Q6UVY6 613 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 CATSPERGQ6ZRH7 1159 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 ARMC9Q7Z3E5 817 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 ZAR1Q86SH2 424 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 CABP7Q86V35 215 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 FBXL6Q8N531 539 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 RASSF8Q8NHQ8 419 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.89□□□□□ -1.31
CAPN3-218ENST00000568153 SMARCE1Q969G3 411 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 DHX58Q96C10 678 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 PSMG3-AS1Q96PY0 264 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 CCSER1Q9C0I3 900 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 ACBD3Q9H3P7 528 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 TAF1DQ9H5J8 278 aaPredicted RBP6.89□□□□□ -1.31
CAPN3-218ENST00000568153 MAP3K20Q9NYL2 800 aaKnown RBP6.89□□□□□ -1.31
CAPN3-218ENST00000568153 LRWD1Q9UFC0 647 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 TUBE1Q9UJT0 475 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 CCPG1Q9ULG6 757 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 PCDHA12Q9UN75 941 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 PCDHA5Q9Y5H7 936 aa6.89□□□□□ -1.31
CAPN3-218ENST00000568153 BECN2A8MW95 431 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 WDR64B1ANS9 1081 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 ADM5C9JUS6 153 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 GOLGA6L19H0YKK7 550 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 TBX3O15119 743 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 TDP2O95551 362 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 VCAM1P19320 739 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 CDC25AP30304 524 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 HOXA13P31271 388 aaPredicted RBP6.88□□□□□ -1.31
CAPN3-218ENST00000568153 CIITAP33076 1130 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 AFMP43652 599 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 SARSP49591 514 aaKnown RBP6.88□□□□□ -1.31
CAPN3-218ENST00000568153 HMGCS2P54868 508 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 AMPD3Q01432 767 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 PPATQ06203 517 aa6.88□□□□□ -1.31
CAPN3-218ENST00000568153 SLBPQ14493 270 aaKnown RBP eCLIP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms