RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 TNFSF13BQ9Y275 285 aa19.76■□□□□ 0.75
COMMD4-222ENST00000568034 GDAQ9Y2T3 454 aa19.76■□□□□ 0.75
COMMD4-222ENST00000568034 A0A0U1RQF3 1178 aa19.75■□□□□ 0.75
COMMD4-222ENST00000568034 ZBBXA8MT70 800 aa19.75■□□□□ 0.75
COMMD4-222ENST00000568034 EIF3DO15371 548 aaKnown RBP eCLIP19.75■□□□□ 0.75
COMMD4-222ENST00000568034 MBD3O95983 291 aa19.75■□□□□ 0.75
COMMD4-222ENST00000568034 ABCD1P33897 745 aa19.75■□□□□ 0.75
COMMD4-222ENST00000568034 STRN3Q13033 797 aa19.75■□□□□ 0.75
COMMD4-222ENST00000568034 PSMD2Q13200 908 aa19.75■□□□□ 0.75
COMMD4-222ENST00000568034 BMT2Q1RMZ1 405 aa19.75■□□□□ 0.75
COMMD4-222ENST00000568034 TWF2Q6IBS0 349 aaKnown RBP19.75■□□□□ 0.75
COMMD4-222ENST00000568034 ZPBP2Q6X784 338 aa19.75■□□□□ 0.75
COMMD4-222ENST00000568034 SLC24A5Q71RS6 500 aa19.75■□□□□ 0.75
COMMD4-222ENST00000568034 TMCO2Q7Z6W1 182 aaPredicted RBP19.75■□□□□ 0.75
COMMD4-222ENST00000568034 ZNF598Q86UK7 904 aaKnown RBP19.75■□□□□ 0.75
COMMD4-222ENST00000568034 TDHQ8IZJ6 230 aa19.75■□□□□ 0.75
COMMD4-222ENST00000568034 ZNF507Q8TCN5 953 aa19.75■□□□□ 0.75
COMMD4-222ENST00000568034 SMARCE1Q969G3 411 aa19.75■□□□□ 0.75
COMMD4-222ENST00000568034 GSDMAQ96QA5 445 aa19.75■□□□□ 0.75
COMMD4-222ENST00000568034 HAPLN2Q9GZV7 340 aa19.75■□□□□ 0.75
COMMD4-222ENST00000568034 NUP62CLQ9H1M0 184 aa19.75■□□□□ 0.75
COMMD4-222ENST00000568034 FAM105AQ9NUU6 356 aa19.75■□□□□ 0.75
COMMD4-222ENST00000568034 MAN1B1Q9UKM7 699 aa19.75■□□□□ 0.75
COMMD4-222ENST00000568034 PCDHB13Q9Y5F0 798 aa19.75■□□□□ 0.75
COMMD4-222ENST00000568034 TISP43B9A030 160 aa19.74■□□□□ 0.75
COMMD4-222ENST00000568034 N4BP3O15049 544 aa19.74■□□□□ 0.75
COMMD4-222ENST00000568034 FAM109BQ6ICB4 259 aaPredicted RBP19.74■□□□□ 0.75
COMMD4-222ENST00000568034 SLC27A1Q6PCB7 646 aa19.74■□□□□ 0.75
COMMD4-222ENST00000568034 ECHDC2Q86YB7 292 aa19.74■□□□□ 0.75
COMMD4-222ENST00000568034 MYOCDQ8IZQ8 938 aa19.74■□□□□ 0.75
COMMD4-222ENST00000568034 SMG8Q8ND04 991 aaKnown RBP19.74■□□□□ 0.75
COMMD4-222ENST00000568034 ZBTB45Q96K62 511 aaPredicted RBP19.74■□□□□ 0.75
COMMD4-222ENST00000568034 MTIF3Q9H2K0 278 aaKnown RBP19.74■□□□□ 0.75
COMMD4-222ENST00000568034 COLQQ9Y215 455 aaPredicted RBP19.74■□□□□ 0.75
COMMD4-222ENST00000568034 UBE4BO95155 1302 aa19.74■□□□□ 0.75
COMMD4-222ENST00000568034 ANKRD63C9JTQ0 380 aa19.73■□□□□ 0.75
COMMD4-222ENST00000568034 ZNF623O75123 536 aa19.73■□□□□ 0.75
COMMD4-222ENST00000568034 SMC2O95347 1197 aa19.73■□□□□ 0.75
COMMD4-222ENST00000568034 AMHP03971 560 aa19.73■□□□□ 0.75
COMMD4-222ENST00000568034 KCNJ6P48051 423 aa19.73■□□□□ 0.75
COMMD4-222ENST00000568034 NCBP1Q09161 790 aaKnown RBP19.73■□□□□ 0.75
COMMD4-222ENST00000568034 TOP1MTQ969P6 601 aa19.73■□□□□ 0.75
COMMD4-222ENST00000568034 ACCSQ96QU6 501 aa19.73■□□□□ 0.75
COMMD4-222ENST00000568034 SLC9A7Q96T83 725 aa19.73■□□□□ 0.75
COMMD4-222ENST00000568034 CDT1Q9H211 546 aa19.73■□□□□ 0.75
COMMD4-222ENST00000568034 RNF19AQ9NV58 838 aa19.73■□□□□ 0.75
COMMD4-222ENST00000568034 RMND1Q9NWS8 449 aa19.73■□□□□ 0.75
COMMD4-222ENST00000568034 KIAA1468Q9P260 1216 aa19.73■□□□□ 0.75
COMMD4-222ENST00000568034 PCDHB2Q9Y5E7 798 aa19.73■□□□□ 0.75
COMMD4-222ENST00000568034 SLC4A7Q9Y6M7 1214 aa19.73■□□□□ 0.75
COMMD4-222ENST00000568034 LAMA3Q16787 3333 aa19.73■□□□□ 0.75
COMMD4-222ENST00000568034 HNRNPDLO14979 420 aaKnown RBP19.72■□□□□ 0.75
COMMD4-222ENST00000568034 TOM1L1O75674 476 aa19.72■□□□□ 0.75
COMMD4-222ENST00000568034 NPTXRO95502 500 aa19.72■□□□□ 0.75
COMMD4-222ENST00000568034 BMP6P22004 513 aa19.72■□□□□ 0.75
COMMD4-222ENST00000568034 MPZL3Q6UWV2 235 aa19.72■□□□□ 0.75
COMMD4-222ENST00000568034 MRPL10Q7Z7H8 261 aaKnown RBP19.72■□□□□ 0.75
COMMD4-222ENST00000568034 NPAS4Q8IUM7 802 aa19.72■□□□□ 0.75
COMMD4-222ENST00000568034 SMYD4Q8IYR2 804 aaPredicted RBP19.72■□□□□ 0.75
COMMD4-222ENST00000568034 PHOSPHO2Q8TCD6 241 aa19.72■□□□□ 0.75
COMMD4-222ENST00000568034 CCDC47Q96A33 483 aaKnown RBP19.72■□□□□ 0.75
COMMD4-222ENST00000568034 NXF3Q9H4D5 531 aaKnown RBP19.72■□□□□ 0.75
COMMD4-222ENST00000568034 ELAC1Q9H777 363 aaKnown RBP19.72■□□□□ 0.75
COMMD4-222ENST00000568034 RC3H2Q9HBD1 1191 aaKnown RBP19.72■□□□□ 0.75
COMMD4-222ENST00000568034 TMEM161AQ9NX61 479 aa19.72■□□□□ 0.75
COMMD4-222ENST00000568034 IPPQ9Y573 584 aa19.72■□□□□ 0.75
COMMD4-222ENST00000568034 STYXL1Q9Y6J8 313 aa19.72■□□□□ 0.75
COMMD4-222ENST00000568034 TRIOBPQ9H2D6 2365 aa19.71■□□□□ 0.75
COMMD4-222ENST00000568034 MEIS3P2A8K0S8 358 aa19.71■□□□□ 0.75
COMMD4-222ENST00000568034 TGFB1I1O43294 461 aa19.71■□□□□ 0.75
COMMD4-222ENST00000568034 ATP2A2P16615 1042 aaKnown RBP19.71■□□□□ 0.75
COMMD4-222ENST00000568034 ADSSP30520 456 aa19.71■□□□□ 0.75
COMMD4-222ENST00000568034 LIG4P49917 911 aa19.71■□□□□ 0.75
COMMD4-222ENST00000568034 RAB27AP51159 221 aa19.71■□□□□ 0.75
COMMD4-222ENST00000568034 MCL1Q07820 350 aa19.71■□□□□ 0.75
COMMD4-222ENST00000568034 ZNF568Q3ZCX4 644 aa19.71■□□□□ 0.75
COMMD4-222ENST00000568034 ZNF658Q5TYW1 1059 aaPredicted RBP19.71■□□□□ 0.75
COMMD4-222ENST00000568034 RBM43Q6ZSC3 357 aaKnown RBP19.71■□□□□ 0.75
COMMD4-222ENST00000568034 STXBP4Q6ZWJ1 553 aa19.71■□□□□ 0.75
COMMD4-222ENST00000568034 NELFCDQ8IXH7 590 aa19.71■□□□□ 0.75
COMMD4-222ENST00000568034 CEP120Q8N960 986 aa19.71■□□□□ 0.75
COMMD4-222ENST00000568034 BICD1Q96G01 975 aa19.71■□□□□ 0.75
COMMD4-222ENST00000568034 TMEM206Q9H813 350 aa19.71■□□□□ 0.75
COMMD4-222ENST00000568034 TMEM63CQ9P1W3 806 aa19.71■□□□□ 0.75
COMMD4-222ENST00000568034 ANKFY1Q9P2R3 1169 aa19.71■□□□□ 0.75
COMMD4-222ENST00000568034 HES2Q9Y543 173 aa19.71■□□□□ 0.75
COMMD4-222ENST00000568034 A0A1W2PPC1 479 aa19.7■□□□□ 0.74
COMMD4-222ENST00000568034 GRXCR1A8MXD5 290 aa19.7■□□□□ 0.74
COMMD4-222ENST00000568034 FAM189A1O60320 539 aa19.7■□□□□ 0.74
COMMD4-222ENST00000568034 GJB5O95377 273 aa19.7■□□□□ 0.74
COMMD4-222ENST00000568034 MCF2P10911 925 aa19.7■□□□□ 0.74
COMMD4-222ENST00000568034 MORC3Q14149 939 aa19.7■□□□□ 0.74
COMMD4-222ENST00000568034 NOLC1Q14978 699 aaKnown RBP eCLIP19.7■□□□□ 0.74
COMMD4-222ENST00000568034 TMEM132AQ24JP5 1023 aa19.7■□□□□ 0.74
COMMD4-222ENST00000568034 DCAF4L1Q3SXM0 396 aa19.7■□□□□ 0.74
COMMD4-222ENST00000568034 COBLL1Q53SF7 1204 aa19.7■□□□□ 0.74
COMMD4-222ENST00000568034 AGMOQ6ZNB7 445 aa19.7■□□□□ 0.74
COMMD4-222ENST00000568034 HERC6Q8IVU3 1022 aa19.7■□□□□ 0.74
COMMD4-222ENST00000568034 LPPQ93052 612 aa19.7■□□□□ 0.74
COMMD4-222ENST00000568034 RNF39Q9H2S5 420 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms