RNA–Protein interactions for RNA: ENST00000567988.5

FANCA-229, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-229ENST00000567988 GPBP1Q86WP2 473 aa13.55□□□□□ -0.24
FANCA-229ENST00000567988 CDR2LQ86X02 465 aaPredicted RBP13.55□□□□□ -0.24
FANCA-229ENST00000567988 SLC39A11Q8N1S5 342 aa13.55□□□□□ -0.24
FANCA-229ENST00000567988 DEPTORQ8TB45 409 aa13.55□□□□□ -0.24
FANCA-229ENST00000567988 DNAJC19Q96DA6 116 aa13.55□□□□□ -0.24
FANCA-229ENST00000567988 CDK5RAP3Q96JB5 506 aa13.55□□□□□ -0.24
FANCA-229ENST00000567988 IFT74Q96LB3 600 aa13.55□□□□□ -0.24
FANCA-229ENST00000567988 MRPL9Q9BYD2 267 aaKnown RBP13.55□□□□□ -0.24
FANCA-229ENST00000567988 RSAD1Q9HA92 442 aa13.55□□□□□ -0.24
FANCA-229ENST00000567988 HES2Q9Y543 173 aa13.55□□□□□ -0.24
FANCA-229ENST00000567988 BDP1A6H8Y1 2624 aa13.55□□□□□ -0.24
FANCA-229ENST00000567988 PLXNA4Q9HCM2 1894 aa13.55□□□□□ -0.24
FANCA-229ENST00000567988 FRMD3A2A2Y4 597 aa13.54□□□□□ -0.24
FANCA-229ENST00000567988 FSCN2O14926 492 aa13.54□□□□□ -0.24
FANCA-229ENST00000567988 MEFVO15553 781 aaPredicted RBP13.54□□□□□ -0.24
FANCA-229ENST00000567988 GTPBP6O43824 516 aaPredicted RBP13.54□□□□□ -0.24
FANCA-229ENST00000567988 CUTAO60888 179 aa13.54□□□□□ -0.24
FANCA-229ENST00000567988 CACNB1Q02641 598 aaPredicted RBP13.54□□□□□ -0.24
FANCA-229ENST00000567988 UBE3AQ05086 875 aa13.54□□□□□ -0.24
FANCA-229ENST00000567988 DMP1Q13316 513 aaPredicted RBP13.54□□□□□ -0.24
FANCA-229ENST00000567988 PRPF4BQ13523 1007 aaKnown RBP13.54□□□□□ -0.24
FANCA-229ENST00000567988 STK38Q15208 465 aa13.54□□□□□ -0.24
FANCA-229ENST00000567988 NAB2Q15742 525 aa13.54□□□□□ -0.24
FANCA-229ENST00000567988 CSPP1Q1MSJ5 1256 aa13.54□□□□□ -0.24
FANCA-229ENST00000567988 FOXD4L5Q5VV16 416 aaPredicted RBP13.54□□□□□ -0.24
FANCA-229ENST00000567988 KCNT2Q6UVM3 1135 aa13.54□□□□□ -0.24
FANCA-229ENST00000567988 GLB1LQ6UWU2 654 aa13.54□□□□□ -0.24
FANCA-229ENST00000567988 TMEM173Q86WV6 379 aaPredicted RBP13.54□□□□□ -0.24
FANCA-229ENST00000567988 ZNF280BQ86YH2 543 aa13.54□□□□□ -0.24
FANCA-229ENST00000567988 RNF169Q8NCN4 708 aa13.54□□□□□ -0.24
FANCA-229ENST00000567988 BCL7CQ8WUZ0 217 aaPredicted RBP13.54□□□□□ -0.24
FANCA-229ENST00000567988 FOXD4L4Q8WXT5 416 aaPredicted RBP13.54□□□□□ -0.24
FANCA-229ENST00000567988 PGBD4Q96DM1 585 aa13.54□□□□□ -0.24
FANCA-229ENST00000567988 CHAMP1Q96JM3 812 aa13.54□□□□□ -0.24
FANCA-229ENST00000567988 ACO2Q99798 780 aaKnown RBP13.54□□□□□ -0.24
FANCA-229ENST00000567988 STRA6Q9BX79 667 aa13.54□□□□□ -0.24
FANCA-229ENST00000567988 ST6GALNAC4Q9H4F1 302 aa13.54□□□□□ -0.24
FANCA-229ENST00000567988 NRDE2Q9H7Z3 1164 aa13.54□□□□□ -0.24
FANCA-229ENST00000567988 ALG13Q9NP73 1137 aaKnown RBP13.54□□□□□ -0.24
FANCA-229ENST00000567988 MIOSQ9NXC5 875 aa13.54□□□□□ -0.24
FANCA-229ENST00000567988 LZTS1Q9Y250 596 aa13.54□□□□□ -0.24
FANCA-229ENST00000567988 TNFSF13BQ9Y275 285 aa13.54□□□□□ -0.24
FANCA-229ENST00000567988 RBM19Q9Y4C8 960 aaKnown RBP13.54□□□□□ -0.24
FANCA-229ENST00000567988 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.53□□□□□ -0.24
FANCA-229ENST00000567988 ARL5CA6NH57 179 aa13.53□□□□□ -0.24
FANCA-229ENST00000567988 MYMKA6NI61 221 aa13.53□□□□□ -0.24
FANCA-229ENST00000567988 N4BP3O15049 544 aa13.53□□□□□ -0.24
FANCA-229ENST00000567988 PPP1R37O75864 691 aa13.53□□□□□ -0.24
FANCA-229ENST00000567988 FGF18O76093 207 aa13.53□□□□□ -0.24
FANCA-229ENST00000567988 DDHD2O94830 711 aa13.53□□□□□ -0.24
FANCA-229ENST00000567988 NPTXRO95502 500 aa13.53□□□□□ -0.24
FANCA-229ENST00000567988 PIGRP01833 764 aa13.53□□□□□ -0.24
FANCA-229ENST00000567988 IBSPP21815 317 aaPredicted RBP13.53□□□□□ -0.24
FANCA-229ENST00000567988 IRS1P35568 1242 aa13.53□□□□□ -0.24
FANCA-229ENST00000567988 PBX3P40426 434 aa13.53□□□□□ -0.24
FANCA-229ENST00000567988 RAD51AP2Q09MP3 1159 aa13.53□□□□□ -0.24
FANCA-229ENST00000567988 CTC1Q2NKJ3 1217 aa13.53□□□□□ -0.24
FANCA-229ENST00000567988 LONRF3Q496Y0 759 aa13.53□□□□□ -0.24
FANCA-229ENST00000567988 TIGD5Q53EQ6 642 aa13.53□□□□□ -0.24
FANCA-229ENST00000567988 KCNG4Q8TDN1 519 aa13.53□□□□□ -0.24
FANCA-229ENST00000567988 VN1R3Q9BXE9 311 aa13.53□□□□□ -0.24
FANCA-229ENST00000567988 CXCL16Q9H2A7 254 aa13.53□□□□□ -0.24
FANCA-229ENST00000567988 UBN1Q9NPG3 1134 aa13.53□□□□□ -0.24
FANCA-229ENST00000567988 PCDHA7Q9UN72 937 aa13.53□□□□□ -0.24
FANCA-229ENST00000567988 GIT1Q9Y2X7 761 aa13.53□□□□□ -0.24
FANCA-229ENST00000567988 FAM237AA0A1B0GTK4 181 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 K7ERI5 159 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 PTGESO14684 152 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 SLC16A4O15374 487 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 FAM189A1O60320 539 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 SSBP05455 408 aaKnown RBP eCLIP13.52□□□□□ -0.25
FANCA-229ENST00000567988 GALTP07902 379 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 ITGA4P13612 1032 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 MLH1P40692 756 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 BCAR1P56945 870 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 NCBP1Q09161 790 aaKnown RBP13.52□□□□□ -0.25
FANCA-229ENST00000567988 CCDC85BQ15834 202 aaPredicted RBP13.52□□□□□ -0.25
FANCA-229ENST00000567988 PTPROQ16827 1216 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 XKR4Q5GH76 650 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 ATF7IP2Q5U623 682 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 RESP18Q5W5W9 173 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 CNNM4Q6P4Q7 775 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 CCDC73Q6ZRK6 1079 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.52□□□□□ -0.25
FANCA-229ENST00000567988 RNF168Q8IYW5 571 aaPredicted RBP13.52□□□□□ -0.25
FANCA-229ENST00000567988 ABI1Q8IZP0 508 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 LEO1Q8WVC0 666 aaPredicted RBP13.52□□□□□ -0.25
FANCA-229ENST00000567988 POF1BQ8WVV4 589 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 ZFP42Q96MM3 310 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 ZNF558Q96NG5 402 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 GAD1Q99259 594 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 HAPLN2Q9GZV7 340 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 CDT1Q9H211 546 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 NSUN3Q9H649 340 aaKnown RBP13.52□□□□□ -0.25
FANCA-229ENST00000567988 KMT5AQ9NQR1 393 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 AAASQ9NRG9 546 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 KBTBD4Q9NVX7 518 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 MARCH5Q9NX47 278 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 DNAJB4Q9UDY4 337 aa13.52□□□□□ -0.25
FANCA-229ENST00000567988 CCDC39Q9UFE4 941 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms