RNA–Protein interactions for RNA: ENST00000567934.5

CDH11-213, Transcript of cadherin 11, humanhuman

TSL 2

Gene CDH11, Length 1,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-213ENST00000567934 ITGB1P05556 798 aa17.27■□□□□ 0.36
CDH11-213ENST00000567934 DDIT3P35638 169 aa17.27■□□□□ 0.36
CDH11-213ENST00000567934 TIGD5Q53EQ6 642 aa17.27■□□□□ 0.36
CDH11-213ENST00000567934 KCNT2Q6UVM3 1135 aa17.27■□□□□ 0.36
CDH11-213ENST00000567934 AGMOQ6ZNB7 445 aa17.27■□□□□ 0.36
CDH11-213ENST00000567934 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.27■□□□□ 0.36
CDH11-213ENST00000567934 DAW1Q8N136 415 aa17.27■□□□□ 0.36
CDH11-213ENST00000567934 POF1BQ8WVV4 589 aa17.27■□□□□ 0.36
CDH11-213ENST00000567934 BLOC1S4Q9NUP1 217 aa17.27■□□□□ 0.36
CDH11-213ENST00000567934 LARSQ9P2J5 1176 aaKnown RBP17.27■□□□□ 0.36
CDH11-213ENST00000567934 PARP2Q9UGN5 583 aa17.27■□□□□ 0.36
CDH11-213ENST00000567934 USP20Q9Y2K6 914 aa17.27■□□□□ 0.36
CDH11-213ENST00000567934 HES2Q9Y543 173 aa17.27■□□□□ 0.36
CDH11-213ENST00000567934 MORC2Q9Y6X9 1032 aaPredicted RBP17.27■□□□□ 0.36
CDH11-213ENST00000567934 TRIP11Q15643 1979 aa17.27■□□□□ 0.36
CDH11-213ENST00000567934 COL6A3P12111 3177 aa17.26■□□□□ 0.35
CDH11-213ENST00000567934 PHLPP2Q6ZVD8 1323 aa17.26■□□□□ 0.35
CDH11-213ENST00000567934 ZC3H11AO75152 810 aaKnown RBP eCLIP17.26■□□□□ 0.35
CDH11-213ENST00000567934 FGF18O76093 207 aa17.26■□□□□ 0.35
CDH11-213ENST00000567934 PLS3P13797 630 aa17.26■□□□□ 0.35
CDH11-213ENST00000567934 STAT6P42226 847 aa17.26■□□□□ 0.35
CDH11-213ENST00000567934 ALDH7A1P49419 539 aaKnown RBP17.26■□□□□ 0.35
CDH11-213ENST00000567934 KRT17Q04695 432 aa17.26■□□□□ 0.35
CDH11-213ENST00000567934 STRN3Q13033 797 aa17.26■□□□□ 0.35
CDH11-213ENST00000567934 MAPK7Q13164 816 aa17.26■□□□□ 0.35
CDH11-213ENST00000567934 ATL3Q6DD88 541 aa17.26■□□□□ 0.35
CDH11-213ENST00000567934 CCDC73Q6ZRK6 1079 aa17.26■□□□□ 0.35
CDH11-213ENST00000567934 APBB1IPQ7Z5R6 666 aaPredicted RBP17.26■□□□□ 0.35
CDH11-213ENST00000567934 SMG8Q8ND04 991 aaKnown RBP17.26■□□□□ 0.35
CDH11-213ENST00000567934 SPPL3Q8TCT6 385 aa17.26■□□□□ 0.35
CDH11-213ENST00000567934 MICAL1Q8TDZ2 1067 aa17.26■□□□□ 0.35
CDH11-213ENST00000567934 CCDC113Q9H0I3 377 aa17.26■□□□□ 0.35
CDH11-213ENST00000567934 TMEM134Q9H6X4 195 aa17.26■□□□□ 0.35
CDH11-213ENST00000567934 PRDM6Q9NQX0 595 aa17.26■□□□□ 0.35
CDH11-213ENST00000567934 KANSL3Q9P2N6 904 aa17.26■□□□□ 0.35
CDH11-213ENST00000567934 STK17AQ9UEE5 414 aa17.26■□□□□ 0.35
CDH11-213ENST00000567934 PUF60Q9UHX1 559 aaKnown RBP17.26■□□□□ 0.35
CDH11-213ENST00000567934 ODF2LQ9ULJ1 636 aa17.26■□□□□ 0.35
CDH11-213ENST00000567934 CUTAO60888 179 aa17.25■□□□□ 0.35
CDH11-213ENST00000567934 TBCAO75347 108 aaKnown RBP17.25■□□□□ 0.35
CDH11-213ENST00000567934 POMCP01189 267 aa17.25■□□□□ 0.35
CDH11-213ENST00000567934 PPM1AP35813 382 aa17.25■□□□□ 0.35
CDH11-213ENST00000567934 PBX3P40426 434 aa17.25■□□□□ 0.35
CDH11-213ENST00000567934 BCAR1P56945 870 aa17.25■□□□□ 0.35
CDH11-213ENST00000567934 DNM1Q05193 864 aaKnown RBP17.25■□□□□ 0.35
CDH11-213ENST00000567934 ARSHQ5FYA8 562 aa17.25■□□□□ 0.35
CDH11-213ENST00000567934 ATF7IP2Q5U623 682 aa17.25■□□□□ 0.35
CDH11-213ENST00000567934 EP400NLQ6ZTU2 488 aa17.25■□□□□ 0.35
CDH11-213ENST00000567934 SV2BQ7L1I2 683 aa17.25■□□□□ 0.35
CDH11-213ENST00000567934 MYCT1Q8N699 235 aa17.25■□□□□ 0.35
CDH11-213ENST00000567934 PDILTQ8N807 584 aa17.25■□□□□ 0.35
CDH11-213ENST00000567934 KCNG4Q8TDN1 519 aa17.25■□□□□ 0.35
CDH11-213ENST00000567934 REEP2Q9BRK0 252 aa17.25■□□□□ 0.35
CDH11-213ENST00000567934 NXF3Q9H4D5 531 aaKnown RBP17.25■□□□□ 0.35
CDH11-213ENST00000567934 PDZD7Q9H5P4 517 aa17.25■□□□□ 0.35
CDH11-213ENST00000567934 NSUN3Q9H649 340 aaKnown RBP17.25■□□□□ 0.35
CDH11-213ENST00000567934 TBC1D13Q9NVG8 400 aa17.25■□□□□ 0.35
CDH11-213ENST00000567934 SPG21Q9NZD8 308 aa17.25■□□□□ 0.35
CDH11-213ENST00000567934 THEGQ9P2T0 379 aa17.25■□□□□ 0.35
CDH11-213ENST00000567934 TTLL13PA6NNM8 815 aa17.24■□□□□ 0.35
CDH11-213ENST00000567934 NT5C1B-RDH14C9J2C7 533 aa17.24■□□□□ 0.35
CDH11-213ENST00000567934 H0YCG3 227 aa17.24■□□□□ 0.35
CDH11-213ENST00000567934 AKAP5P24588 427 aa17.24■□□□□ 0.35
CDH11-213ENST00000567934 MLH1P40692 756 aa17.24■□□□□ 0.35
CDH11-213ENST00000567934 ME1P48163 572 aa17.24■□□□□ 0.35
CDH11-213ENST00000567934 DYMQ7RTS9 669 aa17.24■□□□□ 0.35
CDH11-213ENST00000567934 LRRC15Q8TF66 581 aa17.24■□□□□ 0.35
CDH11-213ENST00000567934 SPIRE2Q8WWL2 714 aa17.24■□□□□ 0.35
CDH11-213ENST00000567934 PPP2R3CQ969Q6 453 aa17.24■□□□□ 0.35
CDH11-213ENST00000567934 RPS6KC1Q96S38 1066 aa17.24■□□□□ 0.35
CDH11-213ENST00000567934 GAD1Q99259 594 aa17.24■□□□□ 0.35
CDH11-213ENST00000567934 TCHPQ9BT92 498 aa17.24■□□□□ 0.35
CDH11-213ENST00000567934 MRPL4Q9BYD3 311 aaKnown RBP17.24■□□□□ 0.35
CDH11-213ENST00000567934 RNF39Q9H2S5 420 aa17.24■□□□□ 0.35
CDH11-213ENST00000567934 NRDE2Q9H7Z3 1164 aa17.24■□□□□ 0.35
CDH11-213ENST00000567934 KLK14Q9P0G3 267 aa17.24■□□□□ 0.35
CDH11-213ENST00000567934 GIT1Q9Y2X7 761 aa17.24■□□□□ 0.35
CDH11-213ENST00000567934 ATP6V1DQ9Y5K8 247 aa17.24■□□□□ 0.35
CDH11-213ENST00000567934 CITO14578 2027 aa17.23■□□□□ 0.35
CDH11-213ENST00000567934 CARNS1A5YM72 827 aa17.23■□□□□ 0.35
CDH11-213ENST00000567934 BRD1O95696 1058 aa17.23■□□□□ 0.35
CDH11-213ENST00000567934 MATR3P43243 847 aaKnown RBP eCLIP17.23■□□□□ 0.35
CDH11-213ENST00000567934 UBE3AQ05086 875 aa17.23■□□□□ 0.35
CDH11-213ENST00000567934 GIT2Q14161 759 aa17.23■□□□□ 0.35
CDH11-213ENST00000567934 DCAF4L1Q3SXM0 396 aa17.23■□□□□ 0.35
CDH11-213ENST00000567934 TCEAL5Q5H9L2 206 aa17.23■□□□□ 0.35
CDH11-213ENST00000567934 NT5DC1Q5TFE4 455 aa17.23■□□□□ 0.35
CDH11-213ENST00000567934 EEF1DP3Q658K8 133 aa17.23■□□□□ 0.35
CDH11-213ENST00000567934 MRPS27Q92552 414 aaKnown RBP17.23■□□□□ 0.35
CDH11-213ENST00000567934 TMEM169Q96HH4 297 aa17.23■□□□□ 0.35
CDH11-213ENST00000567934 NTPCRQ9BSD7 190 aaKnown RBP17.23■□□□□ 0.35
CDH11-213ENST00000567934 PARVGQ9HBI0 331 aa17.23■□□□□ 0.35
CDH11-213ENST00000567934 ARHGAP28Q9P2N2 729 aa17.23■□□□□ 0.35
CDH11-213ENST00000567934 ARL5CA6NH57 179 aa17.22■□□□□ 0.35
CDH11-213ENST00000567934 ALDH2P05091 517 aa17.22■□□□□ 0.35
CDH11-213ENST00000567934 EDN1P05305 212 aa17.22■□□□□ 0.35
CDH11-213ENST00000567934 DNAJB1P25685 340 aa17.22■□□□□ 0.35
CDH11-213ENST00000567934 CA8P35219 290 aa17.22■□□□□ 0.35
CDH11-213ENST00000567934 AFF1P51825 1210 aaKnown RBP17.22■□□□□ 0.35
CDH11-213ENST00000567934 KRT85P78386 507 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms