RNA–Protein interactions for RNA: ENST00000566557.5

SCAMP2-208, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-208ENST00000566557 AAK1Q2M2I8 961 aa17.98■□□□□ 0.47
SCAMP2-208ENST00000566557 HERC4Q5GLZ8 1057 aaPredicted RBP17.98■□□□□ 0.47
SCAMP2-208ENST00000566557 PPP4R3CPQ6ZMV5 832 aa17.98■□□□□ 0.47
SCAMP2-208ENST00000566557 TOP1MTQ969P6 601 aa17.98■□□□□ 0.47
SCAMP2-208ENST00000566557 BICD1Q96G01 975 aa17.98■□□□□ 0.47
SCAMP2-208ENST00000566557 TRIM6Q9C030 488 aaPredicted RBP17.98■□□□□ 0.47
SCAMP2-208ENST00000566557 FZD8Q9H461 694 aa17.98■□□□□ 0.47
SCAMP2-208ENST00000566557 EPHX3Q9H6B9 360 aa17.98■□□□□ 0.47
SCAMP2-208ENST00000566557 RNF216Q9NWF9 866 aaPredicted RBP17.98■□□□□ 0.47
SCAMP2-208ENST00000566557 PCDHB7Q9Y5E2 793 aa17.98■□□□□ 0.47
SCAMP2-208ENST00000566557 ACKR2O00590 384 aa17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 N4BP3O15049 544 aa17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 GADD45BO75293 160 aaPredicted RBP17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 ZNF202O95125 648 aa17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 NPTXRO95502 500 aa17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 EDN1P05305 212 aa17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 MYOGP15173 224 aa17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 NMT1P30419 496 aaKnown RBP17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 RAB27AP51159 221 aa17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 COASYQ13057 564 aa17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 SKIV2LQ15477 1246 aaKnown RBP17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 KRBA2Q6ZNG9 492 aa17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 FAM43BQ6ZT52 329 aaPredicted RBP17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 HAUS6Q7Z4H7 955 aa17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 ECHDC2Q86YB7 292 aa17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 TMEM87AQ8NBN3 555 aa17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 TMEM161BQ8NDZ6 487 aa17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 PAGE5Q96GU1 130 aa17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 CCDC34Q96HJ3 373 aa17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 GBP4Q96PP9 640 aa17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 MRPL4Q9BYD3 311 aaKnown RBP17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 TMEM134Q9H6X4 195 aa17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 MRPL44Q9H9J2 332 aaKnown RBP17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 FAM105AQ9NUU6 356 aa17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 SEL1LQ9UBV2 794 aa17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 PCDHA11Q9Y5I1 949 aa17.97■□□□□ 0.47
SCAMP2-208ENST00000566557 TTLL13PA6NNM8 815 aa17.96■□□□□ 0.47
SCAMP2-208ENST00000566557 PRPF40AO75400 957 aaKnown RBP17.96■□□□□ 0.47
SCAMP2-208ENST00000566557 GCNT3O95395 438 aa17.96■□□□□ 0.47
SCAMP2-208ENST00000566557 MAPTP10636 758 aaKnown RBP17.96■□□□□ 0.47
SCAMP2-208ENST00000566557 SKIP12755 728 aa17.96■□□□□ 0.47
SCAMP2-208ENST00000566557 HOXA11P31270 313 aaPredicted RBP17.96■□□□□ 0.47
SCAMP2-208ENST00000566557 KCNQ1P51787 676 aa17.96■□□□□ 0.47
SCAMP2-208ENST00000566557 FAM160A1Q05DH4 1040 aa17.96■□□□□ 0.47
SCAMP2-208ENST00000566557 CUL4BQ13620 913 aa17.96■□□□□ 0.47
SCAMP2-208ENST00000566557 FAM187BQ17R55 369 aa17.96■□□□□ 0.47
SCAMP2-208ENST00000566557 PAN2Q504Q3 1202 aaKnown RBP17.96■□□□□ 0.47
SCAMP2-208ENST00000566557 ATF7IP2Q5U623 682 aa17.96■□□□□ 0.47
SCAMP2-208ENST00000566557 SLC27A1Q6PCB7 646 aa17.96■□□□□ 0.47
SCAMP2-208ENST00000566557 CCDC51Q96ER9 411 aa17.96■□□□□ 0.47
SCAMP2-208ENST00000566557 C7orf25Q9BPX7 421 aa17.96■□□□□ 0.47
SCAMP2-208ENST00000566557 ADPGKQ9BRR6 497 aa17.96■□□□□ 0.47
SCAMP2-208ENST00000566557 APOL6Q9BWW8 343 aa17.96■□□□□ 0.47
SCAMP2-208ENST00000566557 EIF2AQ9BY44 585 aaKnown RBP17.96■□□□□ 0.47
SCAMP2-208ENST00000566557 TMEM161AQ9NX61 479 aa17.96■□□□□ 0.47
SCAMP2-208ENST00000566557 YBX2Q9Y2T7 364 aaKnown RBP17.96■□□□□ 0.47
SCAMP2-208ENST00000566557 TTC3P53804 2025 aa17.95■□□□□ 0.46
SCAMP2-208ENST00000566557 CA3P07451 260 aa17.95■□□□□ 0.46
SCAMP2-208ENST00000566557 PRR29P0C7W0 189 aa17.95■□□□□ 0.46
SCAMP2-208ENST00000566557 FGFR1P11362 822 aa17.95■□□□□ 0.46
SCAMP2-208ENST00000566557 HARSP12081 509 aaKnown RBP17.95■□□□□ 0.46
SCAMP2-208ENST00000566557 MATR3P43243 847 aaKnown RBP eCLIP17.95■□□□□ 0.46
SCAMP2-208ENST00000566557 GATMP50440 423 aa17.95■□□□□ 0.46
SCAMP2-208ENST00000566557 UBXN11Q5T124 520 aa17.95■□□□□ 0.46
SCAMP2-208ENST00000566557 TAS1R3Q7RTX0 852 aa17.95■□□□□ 0.46
SCAMP2-208ENST00000566557 ABI1Q8IZP0 508 aa17.95■□□□□ 0.46
SCAMP2-208ENST00000566557 FMR1NBQ8N0W7 255 aaPredicted RBP17.95■□□□□ 0.46
SCAMP2-208ENST00000566557 LPPQ93052 612 aa17.95■□□□□ 0.46
SCAMP2-208ENST00000566557 RAD9AQ99638 391 aa17.95■□□□□ 0.46
SCAMP2-208ENST00000566557 NTPCRQ9BSD7 190 aaKnown RBP17.95■□□□□ 0.46
SCAMP2-208ENST00000566557 TARS2Q9BW92 718 aaKnown RBP17.95■□□□□ 0.46
SCAMP2-208ENST00000566557 PDZD7Q9H5P4 517 aa17.95■□□□□ 0.46
SCAMP2-208ENST00000566557 INSL6Q9Y581 213 aa17.95■□□□□ 0.46
SCAMP2-208ENST00000566557 PCDHB2Q9Y5E7 798 aa17.95■□□□□ 0.46
SCAMP2-208ENST00000566557 TRANK1O15050 2925 aa17.94■□□□□ 0.46
SCAMP2-208ENST00000566557 PIEZO1Q92508 2521 aa17.94■□□□□ 0.46
SCAMP2-208ENST00000566557 A0A0U1RQF3 1178 aa17.94■□□□□ 0.46
SCAMP2-208ENST00000566557 LCHNA4D1U4 455 aa17.94■□□□□ 0.46
SCAMP2-208ENST00000566557 GTPBP6O43824 516 aaPredicted RBP17.94■□□□□ 0.46
SCAMP2-208ENST00000566557 UBE2HP62256 183 aa17.94■□□□□ 0.46
SCAMP2-208ENST00000566557 ZNF568Q3ZCX4 644 aa17.94■□□□□ 0.46
SCAMP2-208ENST00000566557 ZC2HC1CQ53FD0 456 aaPredicted RBP17.94■□□□□ 0.46
SCAMP2-208ENST00000566557 TMEM31Q5JXX7 168 aa17.94■□□□□ 0.46
SCAMP2-208ENST00000566557 NT5DC1Q5TFE4 455 aa17.94■□□□□ 0.46
SCAMP2-208ENST00000566557 EEF1DP3Q658K8 133 aa17.94■□□□□ 0.46
SCAMP2-208ENST00000566557 PPP2R2DQ66LE6 453 aa17.94■□□□□ 0.46
SCAMP2-208ENST00000566557 UNC13DQ70J99 1090 aa17.94■□□□□ 0.46
SCAMP2-208ENST00000566557 HACE1Q8IYU2 909 aa17.94■□□□□ 0.46
SCAMP2-208ENST00000566557 HPS3Q969F9 1004 aa17.94■□□□□ 0.46
SCAMP2-208ENST00000566557 PGBD4Q96DM1 585 aa17.94■□□□□ 0.46
SCAMP2-208ENST00000566557 ELAC1Q9H777 363 aaKnown RBP17.94■□□□□ 0.46
SCAMP2-208ENST00000566557 EXOC1Q9NV70 894 aa17.94■□□□□ 0.46
SCAMP2-208ENST00000566557 ANKFY1Q9P2R3 1169 aa17.94■□□□□ 0.46
SCAMP2-208ENST00000566557 FRMD3A2A2Y4 597 aa17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 TBKBP1A7MCY6 615 aa17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 HNRNPDLO14979 420 aaKnown RBP17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 HOXA2O43364 376 aa17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 KINO60870 393 aaKnown RBP17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 NR1I2O75469 434 aa17.93■□□□□ 0.46
SCAMP2-208ENST00000566557 MYBP10242 640 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms