RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 STBD1O95210 358 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 TNFRSF8P28908 595 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 HIRAP54198 1017 aaPredicted RBP20.22■□□□□ 0.83
MSLN-207ENST00000566549 OAZ1P54368 228 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 SP2Q02086 613 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 FMNL3Q8IVF7 1028 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 GOLGA6L1Q8N7Z2 621 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 AFAP1L1Q8TED9 768 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 ZNF526Q8TF50 670 aaPredicted RBP20.22■□□□□ 0.83
MSLN-207ENST00000566549 KIFAP3Q92845 792 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 XPNPEP1Q9NQW7 623 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 ATP8B3O60423 1300 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 TMEM110-MUSTN1A8MSY1 372 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 CNTN2Q02246 1040 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 PAK2Q13177 524 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 CYFIP1Q7L576 1253 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 NOP9Q86U38 636 aaKnown RBP20.22■□□□□ 0.83
MSLN-207ENST00000566549 SLC47A2Q86VL8 602 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 RDM1Q8NG50 284 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 TAS1R2Q8TE23 839 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 PARD3BQ8TEW8 1205 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 SCFD2Q8WU76 684 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 SENP7Q9BQF6 1050 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 CTTNBP2NLQ9P2B4 639 aa20.22■□□□□ 0.83
MSLN-207ENST00000566549 MAFGO15525 162 aa20.21■□□□□ 0.83
MSLN-207ENST00000566549 SART1O43290 800 aaKnown RBP20.21■□□□□ 0.83
MSLN-207ENST00000566549 ERVK-9P63128 1117 aa20.21■□□□□ 0.83
MSLN-207ENST00000566549 ZNF211Q13398 564 aaPredicted RBP20.21■□□□□ 0.83
MSLN-207ENST00000566549 KRT39Q6A163 491 aa20.21■□□□□ 0.83
MSLN-207ENST00000566549 DDX42Q86XP3 938 aaKnown RBP eCLIP20.21■□□□□ 0.83
MSLN-207ENST00000566549 SLC17A8Q8NDX2 589 aa20.21■□□□□ 0.83
MSLN-207ENST00000566549 TMEM174Q8WUU8 243 aa20.21■□□□□ 0.83
MSLN-207ENST00000566549 CAVIN3Q969G5 261 aa20.21■□□□□ 0.83
MSLN-207ENST00000566549 PCDHB18PQ96TA0 734 aa20.21■□□□□ 0.83
MSLN-207ENST00000566549 POLR3FQ9H1D9 316 aaPredicted RBP20.21■□□□□ 0.83
MSLN-207ENST00000566549 CYP26B1Q9NR63 512 aa20.21■□□□□ 0.83
MSLN-207ENST00000566549 PSD3Q9NYI0 1048 aa20.21■□□□□ 0.83
MSLN-207ENST00000566549 LTBP3Q9NS15 1303 aa20.21■□□□□ 0.83
MSLN-207ENST00000566549 CCDC66A2RUB6 948 aa20.21■□□□□ 0.83
MSLN-207ENST00000566549 FGGP02679 453 aa20.21■□□□□ 0.83
MSLN-207ENST00000566549 HNRNPH2P55795 449 aaKnown RBP20.21■□□□□ 0.83
MSLN-207ENST00000566549 PPATQ06203 517 aa20.21■□□□□ 0.83
MSLN-207ENST00000566549 HLTFQ14527 1009 aaKnown RBP eCLIP20.21■□□□□ 0.83
MSLN-207ENST00000566549 LMBRD2Q68DH5 695 aaPredicted RBP20.21■□□□□ 0.83
MSLN-207ENST00000566549 CNKSR2Q8WXI2 1034 aa20.21■□□□□ 0.83
MSLN-207ENST00000566549 FAM213AQ9BRX8 229 aa20.21■□□□□ 0.83
MSLN-207ENST00000566549 AMACRQ9UHK6 382 aa20.21■□□□□ 0.83
MSLN-207ENST00000566549 DGAT1O75907 488 aa20.2■□□□□ 0.82
MSLN-207ENST00000566549 CALCAP01258 141 aa20.2■□□□□ 0.82
MSLN-207ENST00000566549 DCAF12L1Q5VU92 463 aa20.2■□□□□ 0.82
MSLN-207ENST00000566549 ABHD15Q6UXT9 468 aa20.2■□□□□ 0.82
MSLN-207ENST00000566549 SEPT14Q6ZU15 432 aa20.2■□□□□ 0.82
MSLN-207ENST00000566549 EPS8L1Q8TE68 723 aa20.2■□□□□ 0.82
MSLN-207ENST00000566549 DHX38Q92620 1227 aaKnown RBP20.2■□□□□ 0.82
MSLN-207ENST00000566549 RUFY1Q96T51 708 aa20.2■□□□□ 0.82
MSLN-207ENST00000566549 PI4K2AQ9BTU6 479 aa20.2■□□□□ 0.82
MSLN-207ENST00000566549 GPRC5DQ9NZD1 345 aa20.2■□□□□ 0.82
MSLN-207ENST00000566549 AFG3L2Q9Y4W6 797 aa20.2■□□□□ 0.82
MSLN-207ENST00000566549 SSC5DA1L4H1 1573 aa20.2■□□□□ 0.82
MSLN-207ENST00000566549 COL11A1P12107 1806 aaPredicted RBP20.2■□□□□ 0.82
MSLN-207ENST00000566549 MAPK13O15264 365 aa20.19■□□□□ 0.82
MSLN-207ENST00000566549 HSF2BPO75031 334 aa20.19■□□□□ 0.82
MSLN-207ENST00000566549 MMEP08473 750 aa20.19■□□□□ 0.82
MSLN-207ENST00000566549 COPB2P35606 906 aa20.19■□□□□ 0.82
MSLN-207ENST00000566549 SNRPFP62306 86 aaKnown RBP20.19■□□□□ 0.82
MSLN-207ENST00000566549 GNPTABQ3T906 1256 aa20.19■□□□□ 0.82
MSLN-207ENST00000566549 TREML2Q5T2D2 321 aa20.19■□□□□ 0.82
MSLN-207ENST00000566549 ANKRD35Q8N283 1001 aa20.19■□□□□ 0.82
MSLN-207ENST00000566549 TMEM143Q96AN5 459 aa20.19■□□□□ 0.82
MSLN-207ENST00000566549 ATP6V0A4Q9HBG4 840 aa20.19■□□□□ 0.82
MSLN-207ENST00000566549 GOLGA6CA6NDK9 693 aa20.19■□□□□ 0.82
MSLN-207ENST00000566549 DDX3YO15523 660 aaKnown RBP20.19■□□□□ 0.82
MSLN-207ENST00000566549 GOLGA6DP0CG33 693 aa20.19■□□□□ 0.82
MSLN-207ENST00000566549 SPIRE2Q8WWL2 714 aa20.19■□□□□ 0.82
MSLN-207ENST00000566549 ZIM3Q96PE6 472 aa20.19■□□□□ 0.82
MSLN-207ENST00000566549 CELF4Q9BZC1 486 aaKnown RBP20.19■□□□□ 0.82
MSLN-207ENST00000566549 GOLGA6AQ9NYA3 693 aa20.19■□□□□ 0.82
MSLN-207ENST00000566549 NR2E1Q9Y466 385 aa20.19■□□□□ 0.82
MSLN-207ENST00000566549 DAAM1Q9Y4D1 1078 aa20.19■□□□□ 0.82
MSLN-207ENST00000566549 BRCA1P38398 1863 aaKnown RBP20.19■□□□□ 0.82
MSLN-207ENST00000566549 PHIPQ8WWQ0 1821 aa20.19■□□□□ 0.82
MSLN-207ENST00000566549 SPATA31C2B4DYI2 1134 aa20.18■□□□□ 0.82
MSLN-207ENST00000566549 CHRNB2P17787 502 aa20.18■□□□□ 0.82
MSLN-207ENST00000566549 TAS1R3Q7RTX0 852 aa20.18■□□□□ 0.82
MSLN-207ENST00000566549 RASGEF1CQ8N431 466 aa20.18■□□□□ 0.82
MSLN-207ENST00000566549 TMEM8AQ9HCN3 771 aa20.18■□□□□ 0.82
MSLN-207ENST00000566549 HOXC10Q9NYD6 342 aa20.18■□□□□ 0.82
MSLN-207ENST00000566549 POLGP54098 1239 aaPredicted RBP20.18■□□□□ 0.82
MSLN-207ENST00000566549 MFAP3P55082 362 aa20.18■□□□□ 0.82
MSLN-207ENST00000566549 CYP24A1Q07973 514 aa20.18■□□□□ 0.82
MSLN-207ENST00000566549 ZSCAN26Q16670 478 aa20.18■□□□□ 0.82
MSLN-207ENST00000566549 AADACL2Q6P093 401 aa20.18■□□□□ 0.82
MSLN-207ENST00000566549 MIS18BP1Q6P0N0 1132 aa20.18■□□□□ 0.82
MSLN-207ENST00000566549 SV2AQ7L0J3 742 aa20.18■□□□□ 0.82
MSLN-207ENST00000566549 FAM71AQ8IYT1 594 aa20.18■□□□□ 0.82
MSLN-207ENST00000566549 MCPH1Q8NEM0 835 aa20.18■□□□□ 0.82
MSLN-207ENST00000566549 CDHR1Q96JP9 859 aa20.18■□□□□ 0.82
MSLN-207ENST00000566549 IFT74Q96LB3 600 aa20.18■□□□□ 0.82
MSLN-207ENST00000566549 NTPCRQ9BSD7 190 aaKnown RBP20.18■□□□□ 0.82
MSLN-207ENST00000566549 NOCTQ9UK39 431 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms