RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 PPP4R3CPQ6ZMV5 832 aa17.37■□□□□ 0.37
CDH3-204ENST00000565453 BSNDQ8WZ55 320 aa17.37■□□□□ 0.37
CDH3-204ENST00000565453 CASP10Q92851 521 aa17.37■□□□□ 0.37
CDH3-204ENST00000565453 MIOSQ9NXC5 875 aa17.37■□□□□ 0.37
CDH3-204ENST00000565453 MUTYHQ9UIF7 546 aa17.37■□□□□ 0.37
CDH3-204ENST00000565453 NOL7Q9UMY1 257 aaKnown RBP17.37■□□□□ 0.37
CDH3-204ENST00000565453 A0A1B0GUA9 196 aa17.36■□□□□ 0.37
CDH3-204ENST00000565453 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.36■□□□□ 0.37
CDH3-204ENST00000565453 NRP1O14786 923 aa17.36■□□□□ 0.37
CDH3-204ENST00000565453 CYP11B2P19099 503 aa17.36■□□□□ 0.37
CDH3-204ENST00000565453 DSC1Q08554 894 aa17.36■□□□□ 0.37
CDH3-204ENST00000565453 NCBP1Q09161 790 aaKnown RBP17.36■□□□□ 0.37
CDH3-204ENST00000565453 GIT2Q14161 759 aa17.36■□□□□ 0.37
CDH3-204ENST00000565453 BMS1Q14692 1282 aaKnown RBP17.36■□□□□ 0.37
CDH3-204ENST00000565453 PTPN14Q15678 1187 aa17.36■□□□□ 0.37
CDH3-204ENST00000565453 PADI6Q6TGC4 694 aa17.36■□□□□ 0.37
CDH3-204ENST00000565453 CDR2LQ86X02 465 aaPredicted RBP17.36■□□□□ 0.37
CDH3-204ENST00000565453 COLGALT2Q8IYK4 626 aa17.36■□□□□ 0.37
CDH3-204ENST00000565453 GAD1Q99259 594 aa17.36■□□□□ 0.37
CDH3-204ENST00000565453 FZD8Q9H461 694 aa17.36■□□□□ 0.37
CDH3-204ENST00000565453 NXF3Q9H4D5 531 aaKnown RBP17.36■□□□□ 0.37
CDH3-204ENST00000565453 MARCH5Q9NX47 278 aa17.36■□□□□ 0.37
CDH3-204ENST00000565453 GIT1Q9Y2X7 761 aa17.36■□□□□ 0.37
CDH3-204ENST00000565453 PCDHB6Q9Y5E3 794 aa17.36■□□□□ 0.37
CDH3-204ENST00000565453 ARHGEF35A5YM69 484 aa17.35■□□□□ 0.37
CDH3-204ENST00000565453 ARL5CA6NH57 179 aa17.35■□□□□ 0.37
CDH3-204ENST00000565453 LRRIQ4A6NIV6 560 aa17.35■□□□□ 0.37
CDH3-204ENST00000565453 LILRB3O75022 631 aa17.35■□□□□ 0.37
CDH3-204ENST00000565453 CD2BP2O95400 341 aaKnown RBP17.35■□□□□ 0.37
CDH3-204ENST00000565453 EFEMP2O95967 443 aa17.35■□□□□ 0.37
CDH3-204ENST00000565453 ALDH2P05091 517 aa17.35■□□□□ 0.37
CDH3-204ENST00000565453 MLH1P40692 756 aa17.35■□□□□ 0.37
CDH3-204ENST00000565453 SCNN1GP51170 649 aa17.35■□□□□ 0.37
CDH3-204ENST00000565453 FAM187BQ17R55 369 aa17.35■□□□□ 0.37
CDH3-204ENST00000565453 HAUS3Q68CZ6 603 aa17.35■□□□□ 0.37
CDH3-204ENST00000565453 SLC27A1Q6PCB7 646 aa17.35■□□□□ 0.37
CDH3-204ENST00000565453 IGSF22Q8N9C0 903 aa17.35■□□□□ 0.37
CDH3-204ENST00000565453 GSTCDQ8NEC7 633 aa17.35■□□□□ 0.37
CDH3-204ENST00000565453 SLC22A17Q8WUG5 538 aa17.35■□□□□ 0.37
CDH3-204ENST00000565453 TMX3Q96JJ7 454 aa17.35■□□□□ 0.37
CDH3-204ENST00000565453 PRIMPOLQ96LW4 560 aa17.35■□□□□ 0.37
CDH3-204ENST00000565453 ZFP42Q96MM3 310 aa17.35■□□□□ 0.37
CDH3-204ENST00000565453 FAM193BQ96PV7 902 aaPredicted RBP17.35■□□□□ 0.37
CDH3-204ENST00000565453 APOL5Q9BWW9 433 aa17.35■□□□□ 0.37
CDH3-204ENST00000565453 CDH22Q9UJ99 828 aa17.35■□□□□ 0.37
CDH3-204ENST00000565453 FAN1Q9Y2M0 1017 aa17.35■□□□□ 0.37
CDH3-204ENST00000565453 TTLL13PA6NNM8 815 aa17.34■□□□□ 0.37
CDH3-204ENST00000565453 ST18O60284 1047 aa17.34■□□□□ 0.37
CDH3-204ENST00000565453 NPTXRO95502 500 aa17.34■□□□□ 0.37
CDH3-204ENST00000565453 CA8P35219 290 aa17.34■□□□□ 0.37
CDH3-204ENST00000565453 CCT6AP40227 531 aaKnown RBP17.34■□□□□ 0.37
CDH3-204ENST00000565453 PTGDRQ13258 359 aa17.34■□□□□ 0.37
CDH3-204ENST00000565453 PDIA5Q14554 519 aa17.34■□□□□ 0.37
CDH3-204ENST00000565453 IL17AQ16552 155 aa17.34■□□□□ 0.37
CDH3-204ENST00000565453 TPRNQ4KMQ1 711 aa17.34■□□□□ 0.37
CDH3-204ENST00000565453 RNF168Q8IYW5 571 aaPredicted RBP17.34■□□□□ 0.37
CDH3-204ENST00000565453 RPGRIP1Q96KN7 1286 aa17.34■□□□□ 0.37
CDH3-204ENST00000565453 APOL6Q9BWW8 343 aa17.34■□□□□ 0.37
CDH3-204ENST00000565453 CCDC113Q9H0I3 377 aa17.34■□□□□ 0.37
CDH3-204ENST00000565453 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.34■□□□□ 0.37
CDH3-204ENST00000565453 PRMT7Q9NVM4 692 aaPredicted RBP17.34■□□□□ 0.37
CDH3-204ENST00000565453 ZMYM2Q9UBW7 1377 aa17.34■□□□□ 0.37
CDH3-204ENST00000565453 STK39Q9UEW8 545 aa17.34■□□□□ 0.37
CDH3-204ENST00000565453 LRWD1Q9UFC0 647 aa17.34■□□□□ 0.37
CDH3-204ENST00000565453 ARIH1Q9Y4X5 557 aaPredicted RBP17.34■□□□□ 0.37
CDH3-204ENST00000565453 EDN1P05305 212 aa17.33■□□□□ 0.36
CDH3-204ENST00000565453 EPCAMP16422 314 aa17.33■□□□□ 0.36
CDH3-204ENST00000565453 AKAP5P24588 427 aa17.33■□□□□ 0.36
CDH3-204ENST00000565453 NAMPTP43490 491 aa17.33■□□□□ 0.36
CDH3-204ENST00000565453 ZBTB8OSQ8IWT0 167 aa17.33■□□□□ 0.36
CDH3-204ENST00000565453 KLHL5Q96PQ7 755 aa17.33■□□□□ 0.36
CDH3-204ENST00000565453 HERC2P3Q9BVR0 1158 aa17.33■□□□□ 0.36
CDH3-204ENST00000565453 TRIM6Q9C030 488 aaPredicted RBP17.33■□□□□ 0.36
CDH3-204ENST00000565453 C2orf40Q9H1Z8 148 aa17.33■□□□□ 0.36
CDH3-204ENST00000565453 ADAM7Q9H2U9 754 aa17.33■□□□□ 0.36
CDH3-204ENST00000565453 DZANK1Q9NVP4 752 aa17.33■□□□□ 0.36
CDH3-204ENST00000565453 KIAA1024Q9UPX6 916 aa17.33■□□□□ 0.36
CDH3-204ENST00000565453 PRG3Q9Y2Y8 225 aaPredicted RBP17.33■□□□□ 0.36
CDH3-204ENST00000565453 F8W810 466 aa17.32■□□□□ 0.36
CDH3-204ENST00000565453 SOD2P04179 222 aa17.32■□□□□ 0.36
CDH3-204ENST00000565453 PRPHP41219 470 aa17.32■□□□□ 0.36
CDH3-204ENST00000565453 OR1G1P47890 313 aa17.32■□□□□ 0.36
CDH3-204ENST00000565453 ITIH3Q06033 890 aa17.32■□□□□ 0.36
CDH3-204ENST00000565453 HACE1Q8IYU2 909 aa17.32■□□□□ 0.36
CDH3-204ENST00000565453 EDAQ92838 391 aa17.32■□□□□ 0.36
CDH3-204ENST00000565453 BHMT2Q9H2M3 363 aa17.32■□□□□ 0.36
CDH3-204ENST00000565453 PDZD7Q9H5P4 517 aa17.32■□□□□ 0.36
CDH3-204ENST00000565453 POLD4Q9HCU8 107 aa17.32■□□□□ 0.36
CDH3-204ENST00000565453 HCN4Q9Y3Q4 1203 aa17.32■□□□□ 0.36
CDH3-204ENST00000565453 KIF3AQ9Y496 699 aa17.32■□□□□ 0.36
CDH3-204ENST00000565453 STK24Q9Y6E0 443 aa17.32■□□□□ 0.36
CDH3-204ENST00000565453 C5orf42Q9H799 3197 aa17.32■□□□□ 0.36
CDH3-204ENST00000565453 TDRD15B5MCY1 1934 aaKnown RBP17.31■□□□□ 0.36
CDH3-204ENST00000565453 PP2D1A8MPX8 630 aa17.31■□□□□ 0.36
CDH3-204ENST00000565453 LAD1O00515 517 aa17.31■□□□□ 0.36
CDH3-204ENST00000565453 SSBP05455 408 aaKnown RBP eCLIP17.31■□□□□ 0.36
CDH3-204ENST00000565453 CNPP09543 421 aaKnown RBP17.31■□□□□ 0.36
CDH3-204ENST00000565453 TAS1R1Q7RTX1 841 aa17.31■□□□□ 0.36
CDH3-204ENST00000565453 C12orf76Q8N812 135 aaPredicted RBP17.31■□□□□ 0.36
CDH3-204ENST00000565453 FEZF2Q8TBJ5 459 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms