RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 BNIP1Q12981 228 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ORC2Q13416 577 aaPredicted RBP22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 CRELD2Q6UXH1 353 aaPredicted RBP22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 MAB21L3Q8N8X9 362 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ZSWIM2Q8NEG5 633 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ZNF483Q8TF39 744 aaPredicted RBP22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 FAM84AQ96KN4 292 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 RABGAP1Q9Y3P9 1069 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ANKRD62A6NC57 917 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 CHRNB2P17787 502 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 CHRNA3P32297 505 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 COILP38432 576 aaPredicted RBP22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 EPC2Q52LR7 807 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 SYCP3Q8IZU3 236 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 SYT2Q8N9I0 419 aaPredicted RBP22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 SLCO1B3Q9NPD5 702 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 DDX4Q9NQI0 724 aaKnown RBP22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 KCNQ5Q9NR82 932 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 PKD2L1Q9P0L9 805 aa22■■□□□ 1.11
MAP1LC3B-206ENST00000564844 DNAJC3Q13217 504 aa21.99■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ZNF804AQ7Z570 1209 aa21.99■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ARHGEF19Q8IW93 802 aa21.99■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ROBO3Q96MS0 1386 aa21.99■■□□□ 1.11
MAP1LC3B-206ENST00000564844 AGPAT1Q99943 283 aa21.99■■□□□ 1.11
MAP1LC3B-206ENST00000564844 KLHL14Q9P2G3 628 aa21.99■■□□□ 1.11
MAP1LC3B-206ENST00000564844 GSTTP1A0A1W2PQM5 241 aa21.99■■□□□ 1.11
MAP1LC3B-206ENST00000564844 RARGP13631 454 aa21.99■■□□□ 1.11
MAP1LC3B-206ENST00000564844 CCND1P24385 295 aa21.99■■□□□ 1.11
MAP1LC3B-206ENST00000564844 TM4SF1P30408 202 aa21.99■■□□□ 1.11
MAP1LC3B-206ENST00000564844 PCK1P35558 622 aa21.99■■□□□ 1.11
MAP1LC3B-206ENST00000564844 NPEPPSP55786 919 aa21.99■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ECHDC2Q86YB7 292 aa21.99■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ERP27Q96DN0 273 aa21.99■■□□□ 1.11
MAP1LC3B-206ENST00000564844 SAAL1Q96ER3 474 aa21.99■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ZSWIM1Q9BR11 485 aa21.99■■□□□ 1.11
MAP1LC3B-206ENST00000564844 CD209Q9NNX6 404 aa21.99■■□□□ 1.11
MAP1LC3B-206ENST00000564844 THAP12O43422 761 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 TTLL1O95922 423 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 MYL7Q01449 175 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 KRT17Q04695 432 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 CGB2Q6NT52 195 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 CHST7Q9NS84 486 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ZNF219Q9P2Y4 722 aaPredicted RBP21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ARL2BPQ9Y2Y0 163 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 SGPL1O95470 568 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 MTM1Q13496 603 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 RIPK1Q13546 671 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 HYIQ5T013 277 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 LLGL2Q6P1M3 1020 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 CLEC4GQ6UXB4 293 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 FAM43BQ6ZT52 329 aaPredicted RBP21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 EPM2AIP1Q7L775 607 aaPredicted RBP21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 OSBPL1AQ9BXW6 950 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 TRIM7Q9C029 511 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 MIS18BP1Q6P0N0 1132 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 RNF207Q6ZRF8 634 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ANKLE1Q8NAG6 615 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 PITPNM3Q9BZ71 974 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 TAOK3Q9H2K8 898 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 AAASQ9NRG9 546 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 APEX2Q9UBZ4 518 aa21.98■■□□□ 1.11
MAP1LC3B-206ENST00000564844 RAD23BP54727 409 aa21.97■■□□□ 1.11
MAP1LC3B-206ENST00000564844 SARNPP82979 210 aaKnown RBP21.97■■□□□ 1.11
MAP1LC3B-206ENST00000564844 RRP1BQ14684 758 aaKnown RBP21.97■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ZC3H3Q8IXZ2 948 aaKnown RBP21.97■■□□□ 1.11
MAP1LC3B-206ENST00000564844 TBC1D16Q8TBP0 767 aa21.97■■□□□ 1.11
MAP1LC3B-206ENST00000564844 UTP4Q969X6 686 aaKnown RBP21.97■■□□□ 1.11
MAP1LC3B-206ENST00000564844 PCDHB18PQ96TA0 734 aa21.97■■□□□ 1.11
MAP1LC3B-206ENST00000564844 DNAJC18Q9H819 358 aa21.97■■□□□ 1.11
MAP1LC3B-206ENST00000564844 TTC7AQ9ULT0 858 aaPredicted RBP21.97■■□□□ 1.11
MAP1LC3B-206ENST00000564844 LAMB1P07942 1786 aa21.97■■□□□ 1.11
MAP1LC3B-206ENST00000564844 MAP3K13O43283 966 aa21.97■■□□□ 1.11
MAP1LC3B-206ENST00000564844 LGR5O75473 907 aa21.97■■□□□ 1.11
MAP1LC3B-206ENST00000564844 AP1G2O75843 785 aa21.97■■□□□ 1.11
MAP1LC3B-206ENST00000564844 GPSM2P81274 684 aa21.97■■□□□ 1.11
MAP1LC3B-206ENST00000564844 TMED2Q15363 201 aa21.97■■□□□ 1.11
MAP1LC3B-206ENST00000564844 RINT1Q6NUQ1 792 aa21.97■■□□□ 1.11
MAP1LC3B-206ENST00000564844 EIF2AK1Q9BQI3 630 aaKnown RBP21.97■■□□□ 1.11
MAP1LC3B-206ENST00000564844 INTUQ9ULD6 942 aa21.97■■□□□ 1.11
MAP1LC3B-206ENST00000564844 FRMD4BQ9Y2L6 1034 aa21.97■■□□□ 1.11
MAP1LC3B-206ENST00000564844 GPR75-ASB3A0A0A6YYF3 556 aa21.96■■□□□ 1.11
MAP1LC3B-206ENST00000564844 SMNDC1O75940 238 aaKnown RBP eCLIP21.96■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ECEL1O95672 775 aa21.96■■□□□ 1.11
MAP1LC3B-206ENST00000564844 FOXN2P32314 431 aa21.96■■□□□ 1.11
MAP1LC3B-206ENST00000564844 SSTR3P32745 418 aaPredicted RBP21.96■■□□□ 1.11
MAP1LC3B-206ENST00000564844 SPIRE1Q08AE8 756 aa21.96■■□□□ 1.11
MAP1LC3B-206ENST00000564844 GALNTL6Q49A17 601 aa21.96■■□□□ 1.11
MAP1LC3B-206ENST00000564844 ERMNQ8TAM6 284 aa21.96■■□□□ 1.11
MAP1LC3B-206ENST00000564844 IFT74Q96LB3 600 aa21.96■■□□□ 1.11
MAP1LC3B-206ENST00000564844 MYLK2Q9H1R3 596 aa21.96■■□□□ 1.11
MAP1LC3B-206ENST00000564844 PCDHA3Q9Y5H8 950 aa21.96■■□□□ 1.11
MAP1LC3B-206ENST00000564844 SYNGAP1Q96PV0 1343 aa21.96■■□□□ 1.11
MAP1LC3B-206ENST00000564844 PITPNM2Q9BZ72 1349 aa21.96■■□□□ 1.11
MAP1LC3B-206ENST00000564844 DDX39AO00148 427 aaKnown RBP21.96■■□□□ 1.11
MAP1LC3B-206ENST00000564844 PODXLO00592 558 aa21.96■■□□□ 1.11
MAP1LC3B-206ENST00000564844 CBX6O95503 412 aa21.96■■□□□ 1.11
MAP1LC3B-206ENST00000564844 SLMAPQ14BN4 828 aa21.96■■□□□ 1.11
MAP1LC3B-206ENST00000564844 SGO2Q562F6 1265 aa21.96■■□□□ 1.11
MAP1LC3B-206ENST00000564844 SLC13A5Q86YT5 568 aaPredicted RBP21.96■■□□□ 1.11
MAP1LC3B-206ENST00000564844 TTC8Q8TAM2 541 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms