RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 FAM189BP81408 668 aa13.69□□□□□ -0.22
KARS-204ENST00000564578 STRN3Q13033 797 aa13.69□□□□□ -0.22
KARS-204ENST00000564578 L1TD1Q5T7N2 865 aaKnown RBP13.69□□□□□ -0.22
KARS-204ENST00000564578 NOTUMQ6P988 496 aa13.69□□□□□ -0.22
KARS-204ENST00000564578 CHRDL2Q6WN34 429 aa13.69□□□□□ -0.22
KARS-204ENST00000564578 FAM43BQ6ZT52 329 aaPredicted RBP13.69□□□□□ -0.22
KARS-204ENST00000564578 SLC24A5Q71RS6 500 aa13.69□□□□□ -0.22
KARS-204ENST00000564578 TMCO2Q7Z6W1 182 aaPredicted RBP13.69□□□□□ -0.22
KARS-204ENST00000564578 SMARCE1Q969G3 411 aa13.69□□□□□ -0.22
KARS-204ENST00000564578 ZBTB45Q96K62 511 aaPredicted RBP13.69□□□□□ -0.22
KARS-204ENST00000564578 EIF2AQ9BY44 585 aaKnown RBP13.69□□□□□ -0.22
KARS-204ENST00000564578 MRPL4Q9BYD3 311 aaKnown RBP13.69□□□□□ -0.22
KARS-204ENST00000564578 HAPLN2Q9GZV7 340 aa13.69□□□□□ -0.22
KARS-204ENST00000564578 NUP62CLQ9H1M0 184 aa13.69□□□□□ -0.22
KARS-204ENST00000564578 PDZD7Q9H5P4 517 aa13.69□□□□□ -0.22
KARS-204ENST00000564578 TNFSF13BQ9Y275 285 aa13.69□□□□□ -0.22
KARS-204ENST00000564578 TTC3P53804 2025 aa13.69□□□□□ -0.22
KARS-204ENST00000564578 SZT2Q5T011 3432 aa13.69□□□□□ -0.22
KARS-204ENST00000564578 TISP43B9A030 160 aa13.68□□□□□ -0.22
KARS-204ENST00000564578 EIF3DO15371 548 aaKnown RBP eCLIP13.68□□□□□ -0.22
KARS-204ENST00000564578 SMC2O95347 1197 aa13.68□□□□□ -0.22
KARS-204ENST00000564578 NCBP1Q09161 790 aaKnown RBP13.68□□□□□ -0.22
KARS-204ENST00000564578 ATF7IP2Q5U623 682 aa13.68□□□□□ -0.22
KARS-204ENST00000564578 TWF2Q6IBS0 349 aaKnown RBP13.68□□□□□ -0.22
KARS-204ENST00000564578 ZPBP2Q6X784 338 aa13.68□□□□□ -0.22
KARS-204ENST00000564578 SMYD4Q8IYR2 804 aaPredicted RBP13.68□□□□□ -0.22
KARS-204ENST00000564578 HVCN1Q96D96 273 aa13.68□□□□□ -0.22
KARS-204ENST00000564578 MAN1B1Q9UKM7 699 aa13.68□□□□□ -0.22
KARS-204ENST00000564578 CHD9Q3L8U1 2897 aa13.68□□□□□ -0.22
KARS-204ENST00000564578 CHD7Q9P2D1 2997 aa13.68□□□□□ -0.22
KARS-204ENST00000564578 ZMYM2Q9UBW7 1377 aa13.68□□□□□ -0.22
KARS-204ENST00000564578 ANKRD63C9JTQ0 380 aa13.68□□□□□ -0.22
KARS-204ENST00000564578 EFCAB14O75071 495 aa13.68□□□□□ -0.22
KARS-204ENST00000564578 ATF7P17544 494 aaPredicted RBP13.68□□□□□ -0.22
KARS-204ENST00000564578 ABCD1P33897 745 aa13.68□□□□□ -0.22
KARS-204ENST00000564578 ALCAMQ13740 583 aa13.68□□□□□ -0.22
KARS-204ENST00000564578 BMT2Q1RMZ1 405 aa13.68□□□□□ -0.22
KARS-204ENST00000564578 ISM2Q6H9L7 571 aa13.68□□□□□ -0.22
KARS-204ENST00000564578 SLC27A1Q6PCB7 646 aa13.68□□□□□ -0.22
KARS-204ENST00000564578 TOP1MTQ969P6 601 aa13.68□□□□□ -0.22
KARS-204ENST00000564578 FAM105AQ9NUU6 356 aa13.68□□□□□ -0.22
KARS-204ENST00000564578 TMEM63CQ9P1W3 806 aa13.68□□□□□ -0.22
KARS-204ENST00000564578 ZBBXA8MT70 800 aa13.67□□□□□ -0.22
KARS-204ENST00000564578 BIN1O00499 593 aa13.67□□□□□ -0.22
KARS-204ENST00000564578 HNRNPDLO14979 420 aaKnown RBP13.67□□□□□ -0.22
KARS-204ENST00000564578 ZNF623O75123 536 aa13.67□□□□□ -0.22
KARS-204ENST00000564578 TOM1L1O75674 476 aa13.67□□□□□ -0.22
KARS-204ENST00000564578 ADSSP30520 456 aa13.67□□□□□ -0.22
KARS-204ENST00000564578 MORC3Q14149 939 aa13.67□□□□□ -0.22
KARS-204ENST00000564578 NFKBIBQ15653 356 aa13.67□□□□□ -0.22
KARS-204ENST00000564578 ZNF658Q5TYW1 1059 aaPredicted RBP13.67□□□□□ -0.22
KARS-204ENST00000564578 FAM109BQ6ICB4 259 aaPredicted RBP13.67□□□□□ -0.22
KARS-204ENST00000564578 RBM43Q6ZSC3 357 aaKnown RBP13.67□□□□□ -0.22
KARS-204ENST00000564578 ZNF598Q86UK7 904 aaKnown RBP13.67□□□□□ -0.22
KARS-204ENST00000564578 ECHDC2Q86YB7 292 aa13.67□□□□□ -0.22
KARS-204ENST00000564578 SMG8Q8ND04 991 aaKnown RBP13.67□□□□□ -0.22
KARS-204ENST00000564578 ACCSQ96QU6 501 aa13.67□□□□□ -0.22
KARS-204ENST00000564578 C1orf112Q9NSG2 853 aa13.67□□□□□ -0.22
KARS-204ENST00000564578 RMND1Q9NWS8 449 aa13.67□□□□□ -0.22
KARS-204ENST00000564578 MAPK8IP1Q9UQF2 711 aa13.67□□□□□ -0.22
KARS-204ENST00000564578 HES2Q9Y543 173 aa13.67□□□□□ -0.22
KARS-204ENST00000564578 PCDHB2Q9Y5E7 798 aa13.67□□□□□ -0.22
KARS-204ENST00000564578 STYXL1Q9Y6J8 313 aa13.67□□□□□ -0.22
KARS-204ENST00000564578 MEIS3P2A8K0S8 358 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 TGFB1I1O43294 461 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 KLHL40Q2TBA0 621 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 PRPF38BQ5VTL8 546 aaKnown RBP13.66□□□□□ -0.22
KARS-204ENST00000564578 NELFCDQ8IXH7 590 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 TDHQ8IZJ6 230 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 MYOCDQ8IZQ8 938 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 CCDC51Q96ER9 411 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 RNPC3Q96LT9 517 aaKnown RBP13.66□□□□□ -0.22
KARS-204ENST00000564578 CDT1Q9H211 546 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 COLQQ9Y215 455 aaPredicted RBP13.66□□□□□ -0.22
KARS-204ENST00000564578 A0A0B4J269 797 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 N4BP3O15049 544 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 FAM189A1O60320 539 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 LIG4P49917 911 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 MCL1Q07820 350 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 KNOP1Q1ED39 458 aaKnown RBP13.66□□□□□ -0.22
KARS-204ENST00000564578 MPZL3Q6UWV2 235 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 STXBP4Q6ZWJ1 553 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 MRPL10Q7Z7H8 261 aaKnown RBP13.66□□□□□ -0.22
KARS-204ENST00000564578 CEP120Q8N960 986 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 CCDC47Q96A33 483 aaKnown RBP13.66□□□□□ -0.22
KARS-204ENST00000564578 BICD1Q96G01 975 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 RNF39Q9H2S5 420 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 KCTD10Q9H3F6 313 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 NXF3Q9H4D5 531 aaKnown RBP13.66□□□□□ -0.22
KARS-204ENST00000564578 TMEM206Q9H813 350 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 IPPQ9Y573 584 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 SLC4A7Q9Y6M7 1214 aa13.66□□□□□ -0.22
KARS-204ENST00000564578 PTPRSQ13332 1948 aa13.65□□□□□ -0.22
KARS-204ENST00000564578 CLDN3O15551 220 aa13.65□□□□□ -0.22
KARS-204ENST00000564578 NPTXRO95502 500 aa13.65□□□□□ -0.22
KARS-204ENST00000564578 CD44P16070 742 aaKnown RBP13.65□□□□□ -0.22
KARS-204ENST00000564578 PRCPP42785 496 aa13.65□□□□□ -0.22
KARS-204ENST00000564578 ZBTB33Q86T24 672 aa13.65□□□□□ -0.22
KARS-204ENST00000564578 GUF1Q8N442 669 aaKnown RBP13.65□□□□□ -0.22
KARS-204ENST00000564578 ELAC1Q9H777 363 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms