RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 FAM237AA0A1B0GTK4 181 aa19.05■□□□□ 0.64
USB1-209ENST00000564387 FRMD3A2A2Y4 597 aa19.05■□□□□ 0.64
USB1-209ENST00000564387 N4BP3O15049 544 aa19.05■□□□□ 0.64
USB1-209ENST00000564387 SLC16A4O15374 487 aa19.05■□□□□ 0.64
USB1-209ENST00000564387 FOSL2P15408 326 aa19.05■□□□□ 0.64
USB1-209ENST00000564387 CMA1P23946 247 aa19.05■□□□□ 0.64
USB1-209ENST00000564387 SMTNP53814 917 aa19.05■□□□□ 0.64
USB1-209ENST00000564387 CACNB1Q02641 598 aaPredicted RBP19.05■□□□□ 0.64
USB1-209ENST00000564387 PAN2Q504Q3 1202 aaKnown RBP19.05■□□□□ 0.64
USB1-209ENST00000564387 CNNM4Q6P4Q7 775 aa19.05■□□□□ 0.64
USB1-209ENST00000564387 PDILTQ8N807 584 aa19.05■□□□□ 0.64
USB1-209ENST00000564387 IQUBQ8NA54 791 aa19.05■□□□□ 0.64
USB1-209ENST00000564387 HELQQ8TDG4 1101 aa19.05■□□□□ 0.64
USB1-209ENST00000564387 DDX12PQ92771 950 aa19.05■□□□□ 0.64
USB1-209ENST00000564387 ST6GALNAC4Q9H4F1 302 aa19.05■□□□□ 0.64
USB1-209ENST00000564387 UBN1Q9NPG3 1134 aa19.05■□□□□ 0.64
USB1-209ENST00000564387 MTUS1Q9ULD2 1270 aa19.05■□□□□ 0.64
USB1-209ENST00000564387 CIZ1Q9ULV3 898 aaPredicted RBP19.05■□□□□ 0.64
USB1-209ENST00000564387 TNFSF13BQ9Y275 285 aa19.05■□□□□ 0.64
USB1-209ENST00000564387 H0YCG3 227 aa19.04■□□□□ 0.64
USB1-209ENST00000564387 PROZP22891 400 aa19.04■□□□□ 0.64
USB1-209ENST00000564387 GLB1LQ6UWU2 654 aa19.04■□□□□ 0.64
USB1-209ENST00000564387 ABI1Q8IZP0 508 aa19.04■□□□□ 0.64
USB1-209ENST00000564387 LRRC43Q8N309 656 aa19.04■□□□□ 0.64
USB1-209ENST00000564387 RNF169Q8NCN4 708 aa19.04■□□□□ 0.64
USB1-209ENST00000564387 ACO2Q99798 780 aaKnown RBP19.04■□□□□ 0.64
USB1-209ENST00000564387 MRPL9Q9BYD2 267 aaKnown RBP19.04■□□□□ 0.64
USB1-209ENST00000564387 RNF39Q9H2S5 420 aa19.04■□□□□ 0.64
USB1-209ENST00000564387 TNMDQ9H2S6 317 aa19.04■□□□□ 0.64
USB1-209ENST00000564387 HPSEQ9Y251 543 aa19.04■□□□□ 0.64
USB1-209ENST00000564387 USP20Q9Y2K6 914 aa19.04■□□□□ 0.64
USB1-209ENST00000564387 MTCH2Q9Y6C9 303 aa19.04■□□□□ 0.64
USB1-209ENST00000564387 ABLIM1O14639 778 aa19.03■□□□□ 0.64
USB1-209ENST00000564387 TRAK2O60296 914 aa19.03■□□□□ 0.64
USB1-209ENST00000564387 FAM13AO94988 1023 aa19.03■□□□□ 0.64
USB1-209ENST00000564387 IBSPP21815 317 aaPredicted RBP19.03■□□□□ 0.64
USB1-209ENST00000564387 CTNNB1P35222 781 aa19.03■□□□□ 0.64
USB1-209ENST00000564387 NOMO2Q5JPE7 1267 aa19.03■□□□□ 0.64
USB1-209ENST00000564387 ATF7IP2Q5U623 682 aa19.03■□□□□ 0.64
USB1-209ENST00000564387 EEF1DP3Q658K8 133 aa19.03■□□□□ 0.64
USB1-209ENST00000564387 HAUS6Q7Z4H7 955 aa19.03■□□□□ 0.64
USB1-209ENST00000564387 CDR2LQ86X02 465 aaPredicted RBP19.03■□□□□ 0.64
USB1-209ENST00000564387 MYCT1Q8N699 235 aa19.03■□□□□ 0.64
USB1-209ENST00000564387 C11orf84Q9BUA3 381 aaPredicted RBP19.03■□□□□ 0.64
USB1-209ENST00000564387 STRA6Q9BX79 667 aa19.03■□□□□ 0.64
USB1-209ENST00000564387 MRPL4Q9BYD3 311 aaKnown RBP19.03■□□□□ 0.64
USB1-209ENST00000564387 NXF3Q9H4D5 531 aaKnown RBP19.03■□□□□ 0.64
USB1-209ENST00000564387 RSAD1Q9HA92 442 aa19.03■□□□□ 0.64
USB1-209ENST00000564387 MAGEF1Q9HAY2 307 aa19.03■□□□□ 0.64
USB1-209ENST00000564387 FAM13BQ9NYF5 915 aa19.03■□□□□ 0.64
USB1-209ENST00000564387 HCSTQ9UBK5 93 aa19.03■□□□□ 0.64
USB1-209ENST00000564387 SEL1LQ9UBV2 794 aa19.03■□□□□ 0.64
USB1-209ENST00000564387 GIT1Q9Y2X7 761 aa19.03■□□□□ 0.64
USB1-209ENST00000564387 A0A1W2PQ27 194 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 A0A1W2PQ64 194 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 A0A1W2PQD8 194 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 POLR2DO15514 142 aaKnown RBP19.02■□□□□ 0.64
USB1-209ENST00000564387 TBCAO75347 108 aaKnown RBP19.02■□□□□ 0.64
USB1-209ENST00000564387 NPTXRO95502 500 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 KRT18P05783 430 aaKnown RBP19.02■□□□□ 0.64
USB1-209ENST00000564387 ITGA4P13612 1032 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 LAG3P18627 525 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 ABCD1P33897 745 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 AFF1P51825 1210 aaKnown RBP19.02■□□□□ 0.64
USB1-209ENST00000564387 GTF2BQ00403 316 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 GPM6BQ13491 265 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 CSPP1Q1MSJ5 1256 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 ZPBP2Q6X784 338 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 DYMQ7RTS9 669 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 SLC17A8Q8NDX2 589 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 GSTCDQ8NEC7 633 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 GDPD5Q8WTR4 605 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 PYM1Q9BRP8 204 aaKnown RBP19.02■□□□□ 0.64
USB1-209ENST00000564387 LRRC27Q9C0I9 530 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 LMAN2LQ9H0V9 348 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 AAASQ9NRG9 546 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 TBC1D13Q9NVG8 400 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 KANSL3Q9P2N6 904 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 KCNH3Q9ULD8 1083 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 PLAGL2Q9UPG8 496 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 HES2Q9Y543 173 aa19.02■□□□□ 0.64
USB1-209ENST00000564387 PRUNE2Q8WUY3 3088 aa19.02■□□□□ 0.63
USB1-209ENST00000564387 PPP1R37O75864 691 aa19.01■□□□□ 0.63
USB1-209ENST00000564387 PIGRP01833 764 aa19.01■□□□□ 0.63
USB1-209ENST00000564387 GAP43P17677 238 aa19.01■□□□□ 0.63
USB1-209ENST00000564387 DCAF4L1Q3SXM0 396 aa19.01■□□□□ 0.63
USB1-209ENST00000564387 LONRF3Q496Y0 759 aa19.01■□□□□ 0.63
USB1-209ENST00000564387 ZNF720Q7Z2F6 126 aa19.01■□□□□ 0.63
USB1-209ENST00000564387 HACE1Q8IYU2 909 aa19.01■□□□□ 0.63
USB1-209ENST00000564387 COLGALT1Q8NBJ5 622 aa19.01■□□□□ 0.63
USB1-209ENST00000564387 DHX58Q96C10 678 aa19.01■□□□□ 0.63
USB1-209ENST00000564387 ADPGKQ9BRR6 497 aa19.01■□□□□ 0.63
USB1-209ENST00000564387 TARS2Q9BW92 718 aaKnown RBP19.01■□□□□ 0.63
USB1-209ENST00000564387 TRIM9Q9C026 710 aa19.01■□□□□ 0.63
USB1-209ENST00000564387 TRIM6Q9C030 488 aaPredicted RBP19.01■□□□□ 0.63
USB1-209ENST00000564387 OLFML3Q9NRN5 406 aa19.01■□□□□ 0.63
USB1-209ENST00000564387 CARNS1A5YM72 827 aa19■□□□□ 0.63
USB1-209ENST00000564387 ARL5CA6NH57 179 aa19■□□□□ 0.63
USB1-209ENST00000564387 TOM1L1O75674 476 aa19■□□□□ 0.63
USB1-209ENST00000564387 ITGB1P05556 798 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms