RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 C18orf8Q96DM3 657 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 WDR89Q96FK6 387 aaPredicted RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 SPAG5Q96R06 1193 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 ORAI2Q96SN7 254 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 CGRRF1Q99675 332 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 DPH2Q9BQC3 489 aaPredicted RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 PHF20Q9BVI0 1012 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 USP26Q9BXU7 913 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 MKRN2Q9H000 416 aaKnown RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 CNTD2Q9H8S5 307 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 GP6Q9HCN6 339 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 DCP1AQ9NPI6 582 aaPredicted RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 PLSCR4Q9NRQ2 329 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 GPR55Q9Y2T6 319 aaPredicted RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 GPR45Q9Y5Y3 372 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 NWD1Q149M9 1564 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 GOLGA6L6A8MZA4 724 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 B4DLN1 442 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 CLGNO14967 610 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 ZNF862O60290 1169 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 USO1O60763 962 aaKnown RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 DKC1O60832 514 aaKnown RBP eCLIP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 ADAM23O75077 832 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 ZBED4O75132 1171 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 SKAP2O75563 359 aaPredicted RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 SCG5P05408 212 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 SLC3A2P08195 630 aaKnown RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 FURINP09958 794 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 ACTN2P35609 894 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 YARSP54577 528 aaKnown RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 ETF1P62495 437 aaKnown RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 SMAD3P84022 425 aaKnown RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 POLD3Q15054 466 aaPredicted RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 SMAD1Q15797 465 aaKnown RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 MPEG1Q2M385 716 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 ANKRD39Q53RE8 183 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 KLHDC7AQ5VTJ3 777 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 ZNF772Q68DY9 489 aaPredicted RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 IQCEQ6IPM2 695 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 MAEAQ7L5Y9 396 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 LCA5Q86VQ0 697 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 TXNRD3Q86VQ6 643 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 CPOQ8IVL8 374 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 BRSK2Q8IWQ3 736 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 CCDC33Q8N5R6 958 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 RILPL2Q969X0 211 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 COA7Q96BR5 231 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 MAELQ96JY0 434 aaKnown RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 CCDC140Q96MF4 163 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 MPHOSPH8Q99549 860 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 FAM167BQ9BTA0 163 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 C22orf23Q9BZE7 217 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 ZDHHC5Q9C0B5 715 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 PNNQ9H307 717 aaKnown RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 SH2B1Q9NRF2 756 aaPredicted RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 ZNF277Q9NRM2 450 aaPredicted RBP5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 MAFFQ9ULX9 164 aa5.89□□□□□ -1.47
VPS35P1-201ENST00000563400 JCADQ9P266 1359 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 CGNL1Q0VF96 1302 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 CCDC66A2RUB6 948 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 PGPEP1LA6NFU8 196 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 ARNTLO00327 626 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 IPO5O00410 1097 aaKnown RBP5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 CHL1O00533 1208 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 SOX1O00570 391 aaPredicted RBP5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 IRAK2O43187 625 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 XBP1P17861 261 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 ALDH9A1P49189 494 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 MTNR1BP49286 362 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 CABP4P57796 275 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 DOC2BQ14184 412 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 ADGRE1Q14246 886 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 ASIC2Q16515 512 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 TIGD6Q17RP2 521 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 FAM110CQ1W6H9 321 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 GJC2Q5T442 439 aaPredicted RBP5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 VSIG1Q86XK7 387 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 SIRT2Q8IXJ6 389 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 GALNT15Q8N3T1 639 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 CRACR2BQ8N4Y2 399 aaPredicted RBP5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 C7orf31Q8N865 590 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 RNF152Q8N8N0 203 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 CCDC191Q8NCU4 936 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 SSH3Q8TE77 659 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 ZFPM2Q8WW38 1151 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 COG3Q96JB2 828 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 QRSL1Q9H0R6 528 aaKnown RBP5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 ABCG4Q9H172 646 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 GHITMQ9H3K2 345 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 OBP2BQ9NPH6 170 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 GJB4Q9NTQ9 266 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 NSMCE4AQ9NXX6 385 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 DACT1Q9NYF0 836 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 TBC1D29Q9UFV1 150 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 STAP2Q9UGK3 403 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 PADI4Q9UM07 663 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 TRIM33Q9UPN9 1127 aa5.88□□□□□ -1.47
VPS35P1-201ENST00000563400 MYO5BQ9ULV0 1848 aa5.87□□□□□ -1.47
VPS35P1-201ENST00000563400 A0A087X0M5 115 aa5.87□□□□□ -1.47
VPS35P1-201ENST00000563400 A0A1B0GX30 115 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms