RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 INPPL1O15357 1258 aa17.51■□□□□ 0.39
CLK3-211ENST00000563297 NEMFO60524 1076 aa17.51■□□□□ 0.39
CLK3-211ENST00000563297 SSBP05455 408 aaKnown RBP eCLIP17.51■□□□□ 0.39
CLK3-211ENST00000563297 CNPP09543 421 aaKnown RBP17.51■□□□□ 0.39
CLK3-211ENST00000563297 XRCC6P12956 609 aaKnown RBP eCLIP17.51■□□□□ 0.39
CLK3-211ENST00000563297 RARRES1P49788 294 aa17.51■□□□□ 0.39
CLK3-211ENST00000563297 MRE11P49959 708 aa17.51■□□□□ 0.39
CLK3-211ENST00000563297 MBTD1Q05BQ5 628 aa17.51■□□□□ 0.39
CLK3-211ENST00000563297 NCBP1Q09161 790 aaKnown RBP17.51■□□□□ 0.39
CLK3-211ENST00000563297 ST3GAL1Q11201 340 aa17.51■□□□□ 0.39
CLK3-211ENST00000563297 CAPSQ13938 189 aa17.51■□□□□ 0.39
CLK3-211ENST00000563297 AMHR2Q16671 573 aa17.51■□□□□ 0.39
CLK3-211ENST00000563297 KIAA1841Q6NSI8 718 aa17.51■□□□□ 0.39
CLK3-211ENST00000563297 NOTUMQ6P988 496 aa17.51■□□□□ 0.39
CLK3-211ENST00000563297 ZBTB33Q86T24 672 aa17.51■□□□□ 0.39
CLK3-211ENST00000563297 PPFIBP1Q86W92 1011 aa17.51■□□□□ 0.39
CLK3-211ENST00000563297 COLGALT2Q8IYK4 626 aa17.51■□□□□ 0.39
CLK3-211ENST00000563297 KREMEN2Q8NCW0 462 aa17.51■□□□□ 0.39
CLK3-211ENST00000563297 PRSS33Q8NF86 280 aa17.51■□□□□ 0.39
CLK3-211ENST00000563297 PIGOQ8TEQ8 1089 aa17.51■□□□□ 0.39
CLK3-211ENST00000563297 CCDC51Q96ER9 411 aa17.51■□□□□ 0.39
CLK3-211ENST00000563297 GAD1Q99259 594 aa17.51■□□□□ 0.39
CLK3-211ENST00000563297 CSRNP2Q9H175 543 aa17.51■□□□□ 0.39
CLK3-211ENST00000563297 TMEM60Q9H2L4 133 aa17.51■□□□□ 0.39
CLK3-211ENST00000563297 HES2Q9Y543 173 aa17.51■□□□□ 0.39
CLK3-211ENST00000563297 ARL5CA6NH57 179 aa17.5■□□□□ 0.39
CLK3-211ENST00000563297 ARF4P18085 180 aaPredicted RBP17.5■□□□□ 0.39
CLK3-211ENST00000563297 GLRA2P23416 452 aa17.5■□□□□ 0.39
CLK3-211ENST00000563297 KLRC2P26717 231 aa17.5■□□□□ 0.39
CLK3-211ENST00000563297 CLCN4P51793 760 aa17.5■□□□□ 0.39
CLK3-211ENST00000563297 TRIM29Q14134 588 aa17.5■□□□□ 0.39
CLK3-211ENST00000563297 TMC5Q6UXY8 1006 aa17.5■□□□□ 0.39
CLK3-211ENST00000563297 TAS1R1Q7RTX1 841 aa17.5■□□□□ 0.39
CLK3-211ENST00000563297 CABP7Q86V35 215 aa17.5■□□□□ 0.39
CLK3-211ENST00000563297 EMILIN2Q9BXX0 1053 aa17.5■□□□□ 0.39
CLK3-211ENST00000563297 NFKBIZQ9BYH8 718 aa17.5■□□□□ 0.39
CLK3-211ENST00000563297 MRPL17Q9NRX2 175 aaKnown RBP17.5■□□□□ 0.39
CLK3-211ENST00000563297 POTEMA6NI47 508 aa17.49■□□□□ 0.39
CLK3-211ENST00000563297 SEC24BO95487 1268 aa17.49■□□□□ 0.39
CLK3-211ENST00000563297 EFEMP2O95967 443 aa17.49■□□□□ 0.39
CLK3-211ENST00000563297 SOD2P04179 222 aa17.49■□□□□ 0.39
CLK3-211ENST00000563297 SPATA31C1P0DKV0 1188 aa17.49■□□□□ 0.39
CLK3-211ENST00000563297 AVPR2P30518 371 aa17.49■□□□□ 0.39
CLK3-211ENST00000563297 OR1G1P47890 313 aa17.49■□□□□ 0.39
CLK3-211ENST00000563297 DSC1Q08554 894 aa17.49■□□□□ 0.39
CLK3-211ENST00000563297 GPR149Q86SP6 731 aa17.49■□□□□ 0.39
CLK3-211ENST00000563297 ZDHHC14Q8IZN3 488 aa17.49■□□□□ 0.39
CLK3-211ENST00000563297 ZFP42Q96MM3 310 aa17.49■□□□□ 0.39
CLK3-211ENST00000563297 MARCH5Q9NX47 278 aa17.49■□□□□ 0.39
CLK3-211ENST00000563297 LIMD1Q9UGP4 676 aa17.49■□□□□ 0.39
CLK3-211ENST00000563297 DBR1Q9UK59 544 aaKnown RBP17.49■□□□□ 0.39
CLK3-211ENST00000563297 SORCS3Q9UPU3 1222 aa17.49■□□□□ 0.39
CLK3-211ENST00000563297 USTQ9Y2C2 406 aa17.49■□□□□ 0.39
CLK3-211ENST00000563297 PRG3Q9Y2Y8 225 aaPredicted RBP17.49■□□□□ 0.39
CLK3-211ENST00000563297 TDRD15B5MCY1 1934 aaKnown RBP17.49■□□□□ 0.39
CLK3-211ENST00000563297 B4GALT5O43286 388 aa17.48■□□□□ 0.39
CLK3-211ENST00000563297 BRD1O95696 1058 aa17.48■□□□□ 0.39
CLK3-211ENST00000563297 PDGFBP01127 241 aaPredicted RBP17.48■□□□□ 0.39
CLK3-211ENST00000563297 ATP2B1P20020 1258 aa17.48■□□□□ 0.39
CLK3-211ENST00000563297 MLH1P40692 756 aa17.48■□□□□ 0.39
CLK3-211ENST00000563297 VCPP55072 806 aaKnown RBP17.48■□□□□ 0.39
CLK3-211ENST00000563297 GUCY1B3Q02153 619 aa17.48■□□□□ 0.39
CLK3-211ENST00000563297 CATSPER3Q86XQ3 398 aa17.48■□□□□ 0.39
CLK3-211ENST00000563297 UBALD2Q8IYN6 164 aa17.48■□□□□ 0.39
CLK3-211ENST00000563297 RNF168Q8IYW5 571 aaPredicted RBP17.48■□□□□ 0.39
CLK3-211ENST00000563297 PLCD3Q8N3E9 789 aa17.48■□□□□ 0.39
CLK3-211ENST00000563297 PRRX2Q99811 253 aa17.48■□□□□ 0.39
CLK3-211ENST00000563297 APOL6Q9BWW8 343 aa17.48■□□□□ 0.39
CLK3-211ENST00000563297 POLR3FQ9H1D9 316 aaPredicted RBP17.48■□□□□ 0.39
CLK3-211ENST00000563297 SFXN1Q9H9B4 322 aa17.48■□□□□ 0.39
CLK3-211ENST00000563297 GIT1Q9Y2X7 761 aa17.48■□□□□ 0.39
CLK3-211ENST00000563297 KMT2EQ8IZD2 1858 aa17.48■□□□□ 0.39
CLK3-211ENST00000563297 A0A1B0GUA9 196 aa17.47■□□□□ 0.39
CLK3-211ENST00000563297 C2CD2LO14523 706 aa17.47■□□□□ 0.39
CLK3-211ENST00000563297 USO1O60763 962 aaKnown RBP17.47■□□□□ 0.39
CLK3-211ENST00000563297 ASGR2P07307 311 aa17.47■□□□□ 0.39
CLK3-211ENST00000563297 MCM7P33993 719 aa17.47■□□□□ 0.39
CLK3-211ENST00000563297 SCNN1GP51170 649 aa17.47■□□□□ 0.39
CLK3-211ENST00000563297 TCF15Q12870 199 aa17.47■□□□□ 0.39
CLK3-211ENST00000563297 MTMR3Q13615 1198 aa17.47■□□□□ 0.39
CLK3-211ENST00000563297 KIAA0319Q5VV43 1072 aa17.47■□□□□ 0.39
CLK3-211ENST00000563297 ERICH6BQ5W0A0 696 aa17.47■□□□□ 0.39
CLK3-211ENST00000563297 MAEAQ7L5Y9 396 aa17.47■□□□□ 0.39
CLK3-211ENST00000563297 CDR2LQ86X02 465 aaPredicted RBP17.47■□□□□ 0.39
CLK3-211ENST00000563297 TDRD5Q8NAT2 981 aaKnown RBP17.47■□□□□ 0.39
CLK3-211ENST00000563297 GSTCDQ8NEC7 633 aa17.47■□□□□ 0.39
CLK3-211ENST00000563297 CCDC43Q96MW1 224 aaKnown RBP17.47■□□□□ 0.39
CLK3-211ENST00000563297 RPS6KC1Q96S38 1066 aa17.47■□□□□ 0.39
CLK3-211ENST00000563297 PHOX2BQ99453 314 aa17.47■□□□□ 0.39
CLK3-211ENST00000563297 HERC2P3Q9BVR0 1158 aa17.47■□□□□ 0.39
CLK3-211ENST00000563297 TRIM6Q9C030 488 aaPredicted RBP17.47■□□□□ 0.39
CLK3-211ENST00000563297 SMOC2Q9H3U7 446 aa17.47■□□□□ 0.39
CLK3-211ENST00000563297 NXF3Q9H4D5 531 aaKnown RBP17.47■□□□□ 0.39
CLK3-211ENST00000563297 TUFT1Q9NNX1 390 aa17.47■□□□□ 0.39
CLK3-211ENST00000563297 GPRC5CQ9NQ84 441 aa17.47■□□□□ 0.39
CLK3-211ENST00000563297 SSX2IPQ9Y2D8 614 aa17.47■□□□□ 0.39
CLK3-211ENST00000563297 CACNA1HO95180 2353 aa17.47■□□□□ 0.39
CLK3-211ENST00000563297 C2orf16Q68DN1 1984 aa17.46■□□□□ 0.39
CLK3-211ENST00000563297 F8W810 466 aa17.46■□□□□ 0.39
CLK3-211ENST00000563297 EIF5BO60841 1220 aaKnown RBP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms