RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 PCDHGA12O60330 932 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 FSBPO95073 299 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 XPAP23025 273 aaPredicted RBP4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 MRE11P49959 708 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 MEOX1P50221 254 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 SLC5A3P53794 718 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 EPHB1P54762 984 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 NRG3P56975 720 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 MCL1Q07820 350 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 FOXL1Q12952 345 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 TTF1Q15361 905 aaPredicted RBP4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 PCBP2Q15366 365 aaKnown RBP eCLIP4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 PTPN21Q16825 1174 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 C1orf210Q8IVY1 113 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 GLB1L2Q8IW92 636 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 UNC5BQ8IZJ1 945 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 NELFAQ9H3P2 528 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 MKS1Q9NXB0 559 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 DPP7Q9UHL4 492 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 DNAI1Q9UI46 699 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 ING1Q9UK53 422 aaPredicted RBP4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 THRAP3Q9Y2W1 955 aaKnown RBP4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 CTDP1Q9Y5B0 961 aaPredicted RBP4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 PCDHGA9Q9Y5G4 932 aaKnown RBP4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 PCDHGA8Q9Y5G5 932 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 PCDHGA7Q9Y5G6 932 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 PCDHGA6Q9Y5G7 932 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 PCDHGA3Q9Y5H0 932 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 PCDHGA2Q9Y5H1 932 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 GPR45Q9Y5Y3 372 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 MRFAP1Q9Y605 127 aa4.33□□□□□ -1.72
SHCBP1-202ENST00000563219 A0A1W2PR48 441 aa4.32□□□□□ -1.72
SHCBP1-202ENST00000563219 PMS2P1A4D2B8 440 aa4.32□□□□□ -1.72
SHCBP1-202ENST00000563219 HNRNPLP14866 589 aaKnown RBP eCLIP4.32□□□□□ -1.72
SHCBP1-202ENST00000563219 MEF2AQ02078 507 aaPredicted RBP4.32□□□□□ -1.72
SHCBP1-202ENST00000563219 HGFACQ04756 655 aa4.32□□□□□ -1.72
SHCBP1-202ENST00000563219 IGFL4Q6B9Z1 124 aa4.32□□□□□ -1.72
SHCBP1-202ENST00000563219 CLEC14AQ86T13 490 aa4.32□□□□□ -1.72
SHCBP1-202ENST00000563219 ZBTB46Q86UZ6 589 aa4.32□□□□□ -1.72
SHCBP1-202ENST00000563219 WDR75Q8IWA0 830 aaKnown RBP4.32□□□□□ -1.72
SHCBP1-202ENST00000563219 GPR135Q8IZ08 494 aa4.32□□□□□ -1.72
SHCBP1-202ENST00000563219 CSRNP2Q9H175 543 aa4.32□□□□□ -1.72
SHCBP1-202ENST00000563219 IFT122Q9HBG6 1241 aa4.32□□□□□ -1.72
SHCBP1-202ENST00000563219 TCF7L1Q9HCS4 588 aa4.32□□□□□ -1.72
SHCBP1-202ENST00000563219 GABBR1Q9UBS5 961 aa4.32□□□□□ -1.72
SHCBP1-202ENST00000563219 SCOCQ9UIL1 159 aa4.32□□□□□ -1.72
SHCBP1-202ENST00000563219 E2F8A0AVK6 867 aa4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 NARSO43776 548 aaKnown RBP4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 LY86O95711 162 aa4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 GAAP10253 952 aa4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 ACRV1P26436 265 aa4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 HIBADHP31937 336 aaKnown RBP4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 MSX2P35548 267 aaPredicted RBP4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 DGCR2P98153 550 aa4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 PTH1RQ03431 593 aa4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 CD69Q07108 199 aa4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 ADAM15Q13444 863 aa4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 FHL2Q14192 279 aa4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 GRM7Q14831 915 aa4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 ADRM1Q16186 407 aa4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 LSM12Q3MHD2 195 aaKnown RBP4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 TMEM240Q5SV17 173 aa4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 MBNL2Q5VZF2 373 aaKnown RBP4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 LMBR1LQ6UX01 489 aa4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 BTNL9Q6UXG8 535 aa4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 ADGRE4PQ86SQ3 457 aa4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 ZNF808Q8N4W9 903 aaPredicted RBP4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 IL17DQ8TAD2 202 aa4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 JADE3Q92613 823 aa4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 TSR2Q969E8 191 aaKnown RBP4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 FATE1Q969F0 183 aa4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 SLC7A6OSQ96CW6 309 aaPredicted RBP4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 CAMKK2Q96RR4 588 aa4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 ACE2Q9BYF1 805 aaPredicted RBP4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 EID1Q9Y6B2 187 aa4.31□□□□□ -1.72
SHCBP1-202ENST00000563219 ARID4BQ4LE39 1312 aaPredicted RBP4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 C2orf78A6NCI8 922 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 DAPK3O43293 454 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 MTSS1O43312 755 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 SLC26A4O43511 780 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 TMEM127O75204 238 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 ABLIM3O94929 683 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 OSMP13725 252 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 RECQLP46063 649 aaPredicted RBP4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 ADCY7P51828 1080 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 TGFB2P61812 414 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 CDK17Q00537 523 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 MGAT5Q09328 741 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 ABHD18Q0P651 414 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 PIN1Q13526 163 aaPredicted RBP4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 ODF1Q14990 250 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 LRRC41Q15345 812 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 CLUL1Q15846 466 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 HSP90AB2PQ58FF8 381 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 GJC2Q5T442 439 aaPredicted RBP4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 TAS1R1Q7RTX1 841 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 PNMA8AQ86V59 439 aaPredicted RBP4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 PLA2G15Q8NCC3 412 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 PIK3C3Q8NEB9 887 aa4.3□□□□□ -1.72
SHCBP1-202ENST00000563219 OR14K1Q8NGZ2 314 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms