RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 KLHL33A6NCF5 533 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 CAPN14A8MX76 684 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 PPFIA4O75335 1185 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 RPLP2P05387 115 aaKnown RBP3.97□□□□□ -1.77
CHD9-207ENST00000562806 HSP90B1P14625 803 aaKnown RBP3.97□□□□□ -1.77
CHD9-207ENST00000562806 ACRV1P26436 265 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 SLC16A1P53985 500 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 IGBP1P78318 339 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 CDK17Q00537 523 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 ITKQ08881 620 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 MALLQ13021 153 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 MRPL49Q13405 166 aaKnown RBP3.97□□□□□ -1.77
CHD9-207ENST00000562806 SAFB2Q14151 953 aaKnown RBP eCLIP3.97□□□□□ -1.77
CHD9-207ENST00000562806 ADRM1Q16186 407 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 INAVAQ3KP66 663 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 TOR2AQ5JU69 321 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 LCE4AQ5TA78 99 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 ZNF585AQ6P3V2 769 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 PGM2L1Q6PCE3 622 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 DOK3Q7L591 496 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 MDGA1Q8NFP4 955 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 COG1Q8WTW3 980 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 ST8SIA2Q92186 375 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 CYFIP2Q96F07 1278 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 ZNF512Q96ME7 567 aaPredicted RBP3.97□□□□□ -1.77
CHD9-207ENST00000562806 WWC2-AS2Q96NR7 200 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 SLC13A1Q9BZW2 595 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 ENKD1Q9H0I2 346 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 EPC1Q9H2F5 836 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 AGO3Q9H9G7 860 aaKnown RBP3.97□□□□□ -1.77
CHD9-207ENST00000562806 BCO1Q9HAY6 547 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 VTA1Q9NP79 307 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 ZNF277Q9NRM2 450 aaPredicted RBP3.97□□□□□ -1.77
CHD9-207ENST00000562806 ING3Q9NXR8 418 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 GPRC5DQ9NZD1 345 aa3.97□□□□□ -1.77
CHD9-207ENST00000562806 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 B5MCH6 92 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 TEX33O43247 280 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 HOXA3O43365 443 aaPredicted RBP3.96□□□□□ -1.78
CHD9-207ENST00000562806 AKR1B10O60218 316 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 PEX11BO96011 259 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 RBP3P10745 1247 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 IL2RBP14784 551 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 AGXTP21549 392 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 MGAT1P26572 445 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 ECHS1P30084 290 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 WASP42768 502 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 MAN2A2P49641 1150 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 CDKN1CP49918 316 aaPredicted RBP3.96□□□□□ -1.78
CHD9-207ENST00000562806 SRSF2Q01130 221 aaKnown RBP3.96□□□□□ -1.78
CHD9-207ENST00000562806 EXOSC10Q01780 885 aaKnown RBP3.96□□□□□ -1.78
CHD9-207ENST00000562806 APBA1Q02410 837 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 PTH1RQ03431 593 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 CNGB1Q14028 1251 aaPredicted RBP3.96□□□□□ -1.78
CHD9-207ENST00000562806 ELAVL1Q15717 326 aaKnown RBP3.96□□□□□ -1.78
CHD9-207ENST00000562806 ZXDCQ2QGD7 858 aaPredicted RBP3.96□□□□□ -1.78
CHD9-207ENST00000562806 Q6ZSN1 163 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 C1orf162Q8NEQ5 155 aaPredicted RBP3.96□□□□□ -1.78
CHD9-207ENST00000562806 TSPEARQ8WU66 669 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 TGFBRAP1Q8WUH2 860 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 RIN2Q8WYP3 895 aaPredicted RBP3.96□□□□□ -1.78
CHD9-207ENST00000562806 MTMR8Q96EF0 704 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 TMEM176AQ96HP8 235 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 CEP89Q96ST8 783 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 FAM126AQ9BYI3 521 aaPredicted RBP3.96□□□□□ -1.78
CHD9-207ENST00000562806 ZNF703Q9H7S9 590 aaPredicted RBP3.96□□□□□ -1.78
CHD9-207ENST00000562806 TLR9Q9NR96 1032 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 PARPBPQ9NWS1 579 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 MOCS1Q9NZB8 636 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 TRHDEQ9UKU6 1024 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 SH3BP1Q9Y3L3 701 aa3.96□□□□□ -1.78
CHD9-207ENST00000562806 WASHC2CQ9Y4E1 1318 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 PRR5-ARHGAP8B1AHC4 643 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 PJA2O43164 708 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 TMEM127O75204 238 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 ITGA10O75578 1167 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 VCAM1P19320 739 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 CCND1P24385 295 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 BUD31P41223 144 aaPredicted RBP3.95□□□□□ -1.78
CHD9-207ENST00000562806 MCAMP43121 646 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 FLT3LGP49771 235 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 PER3P56645 1201 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 MGAT2Q10469 447 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 CRHR2Q13324 411 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 MTMR1Q13613 665 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 R3HDM1Q15032 1099 aaKnown RBP3.95□□□□□ -1.78
CHD9-207ENST00000562806 CLUL1Q15846 466 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 ATP2B3Q16720 1220 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 MST1LQ2TV78 715 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 NAIF1Q69YI7 327 aaPredicted RBP3.95□□□□□ -1.78
CHD9-207ENST00000562806 ABHD15Q6UXT9 468 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 HTR3DQ70Z44 454 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 MSL3Q8N5Y2 521 aaKnown RBP3.95□□□□□ -1.78
CHD9-207ENST00000562806 OR7D4Q8NG98 312 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 FAXDC2Q96IV6 333 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 KRTAP3-1Q9BYR8 98 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 MANSC1Q9H8J5 431 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 SCOCQ9UIL1 159 aa3.95□□□□□ -1.78
CHD9-207ENST00000562806 DIRC3C9JPN6 131 aa3.94□□□□□ -1.78
CHD9-207ENST00000562806 RECQL4O94761 1208 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms