RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, human

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND4A-205	ENST00000562540	LEFTY2	O00292	366 aa		4.63	□□□□□ -1.67
DENND4A-205	ENST00000562540	HKR1	P10072	659 aa		4.63	□□□□□ -1.67
DENND4A-205	ENST00000562540	HSP90B1	P14625	803 aa	Known RBP	4.63	□□□□□ -1.67
DENND4A-205	ENST00000562540	GZMK	P49863	264 aa		4.63	□□□□□ -1.67
DENND4A-205	ENST00000562540	RNASE9	P60153	205 aa	Known RBP	4.63	□□□□□ -1.67
DENND4A-205	ENST00000562540	GUCY1B3	Q02153	619 aa		4.63	□□□□□ -1.67
DENND4A-205	ENST00000562540	DUSP2	Q05923	314 aa		4.63	□□□□□ -1.67
DENND4A-205	ENST00000562540	ZNF460	Q14592	562 aa		4.63	□□□□□ -1.67
DENND4A-205	ENST00000562540	BEAN1	Q3B7T3	259 aa		4.63	□□□□□ -1.67
DENND4A-205	ENST00000562540	XYLT1	Q86Y38	959 aa		4.63	□□□□□ -1.67
DENND4A-205	ENST00000562540	PPP1R14C	Q8TAE6	165 aa		4.63	□□□□□ -1.67
DENND4A-205	ENST00000562540	NELL1	Q92832	810 aa		4.63	□□□□□ -1.67
DENND4A-205	ENST00000562540	COQ10A	Q96MF6	247 aa		4.63	□□□□□ -1.67
DENND4A-205	ENST00000562540	INTS7	Q9NVH2	962 aa	Known RBP	4.63	□□□□□ -1.67
DENND4A-205	ENST00000562540	CLCA2	Q9UQC9	943 aa		4.63	□□□□□ -1.67
DENND4A-205	ENST00000562540	PCDHB6	Q9Y5E3	794 aa		4.63	□□□□□ -1.67
DENND4A-205	ENST00000562540	SPO11	Q9Y5K1	396 aa		4.63	□□□□□ -1.67
DENND4A-205	ENST00000562540	EPN1	Q9Y6I3	576 aa	Predicted RBP	4.63	□□□□□ -1.67
DENND4A-205	ENST00000562540	UNC119B	A6NIH7	251 aa		4.62	□□□□□ -1.67
DENND4A-205	ENST00000562540	CBX4	O00257	560 aa		4.62	□□□□□ -1.67
DENND4A-205	ENST00000562540	DNAJC8	O75937	253 aa	Predicted RBP	4.62	□□□□□ -1.67
DENND4A-205	ENST00000562540	LY86	O95711	162 aa		4.62	□□□□□ -1.67
DENND4A-205	ENST00000562540	CXCR5	P32302	372 aa		4.62	□□□□□ -1.67
DENND4A-205	ENST00000562540	BMPR1A	P36894	532 aa		4.62	□□□□□ -1.67
DENND4A-205	ENST00000562540	SEC24C	P53992	1094 aa		4.62	□□□□□ -1.67
DENND4A-205	ENST00000562540	CD69	Q07108	199 aa		4.62	□□□□□ -1.67
DENND4A-205	ENST00000562540	RBL2	Q08999	1139 aa		4.62	□□□□□ -1.67
DENND4A-205	ENST00000562540	PRR16	Q569H4	304 aa		4.62	□□□□□ -1.67
DENND4A-205	ENST00000562540	ZZZ3	Q8IYH5	903 aa		4.62	□□□□□ -1.67
DENND4A-205	ENST00000562540	CDYL2	Q8N8U2	506 aa		4.62	□□□□□ -1.67
DENND4A-205	ENST00000562540	CPEB3	Q8NE35	698 aa	Known RBP	4.62	□□□□□ -1.67
DENND4A-205	ENST00000562540	LINC00476	Q8WZB0	136 aa		4.62	□□□□□ -1.67
DENND4A-205	ENST00000562540	SPON1	Q9HCB6	807 aa		4.62	□□□□□ -1.67
DENND4A-205	ENST00000562540	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	4.62	□□□□□ -1.67
DENND4A-205	ENST00000562540	USP36	Q9P275	1121 aa	Known RBP	4.62	□□□□□ -1.67
DENND4A-205	ENST00000562540	MYPN	Q86TC9	1320 aa		4.62	□□□□□ -1.67
DENND4A-205	ENST00000562540	ST20-MTHFS	A0A0A6YYL1	179 aa		4.61	□□□□□ -1.67
DENND4A-205	ENST00000562540	DIRC3	C9JPN6	131 aa		4.61	□□□□□ -1.67
DENND4A-205	ENST00000562540	SPATA31D3	P0C874	917 aa		4.61	□□□□□ -1.67
DENND4A-205	ENST00000562540	ZSCAN20	P17040	1043 aa	Predicted RBP	4.61	□□□□□ -1.67
DENND4A-205	ENST00000562540	FLT3	P36888	993 aa		4.61	□□□□□ -1.67
DENND4A-205	ENST00000562540	NHLH2	Q02577	135 aa		4.61	□□□□□ -1.67
DENND4A-205	ENST00000562540	FNDC3B	Q53EP0	1204 aa	Known RBP	4.61	□□□□□ -1.67
DENND4A-205	ENST00000562540	EPHA10	Q5JZY3	1008 aa		4.61	□□□□□ -1.67
DENND4A-205	ENST00000562540	CREB3L3	Q68CJ9	461 aa		4.61	□□□□□ -1.67
DENND4A-205	ENST00000562540	SPATA31D4	Q6ZUB0	917 aa		4.61	□□□□□ -1.67
DENND4A-205	ENST00000562540	UBE2R2	Q712K3	238 aa	Predicted RBP	4.61	□□□□□ -1.67
DENND4A-205	ENST00000562540	FERMT2	Q96AC1	680 aa		4.61	□□□□□ -1.67
DENND4A-205	ENST00000562540	CLUHP3	Q96NS8	147 aa		4.61	□□□□□ -1.67
DENND4A-205	ENST00000562540	OSBPL2	Q9H1P3	480 aa		4.61	□□□□□ -1.67
DENND4A-205	ENST00000562540	ZMAT4	Q9H898	229 aa		4.61	□□□□□ -1.67
DENND4A-205	ENST00000562540	OXSM	Q9NWU1	459 aa		4.61	□□□□□ -1.67
DENND4A-205	ENST00000562540	DKK2	Q9UBU2	259 aa		4.61	□□□□□ -1.67
DENND4A-205	ENST00000562540	PIPSL	A2A3N6	862 aa		4.6	□□□□□ -1.67
DENND4A-205	ENST00000562540	HLA-DOA	P06340	250 aa		4.6	□□□□□ -1.67
DENND4A-205	ENST00000562540	JMJD7	P0C870	316 aa		4.6	□□□□□ -1.67
DENND4A-205	ENST00000562540	CD40	P25942	277 aa		4.6	□□□□□ -1.67
DENND4A-205	ENST00000562540	DDX6	P26196	483 aa	Known RBP eCLIP	4.6	□□□□□ -1.67
DENND4A-205	ENST00000562540	PTH2R	P49190	550 aa		4.6	□□□□□ -1.67
DENND4A-205	ENST00000562540	BLOC1S1	P78537	153 aa		4.6	□□□□□ -1.67
DENND4A-205	ENST00000562540	FOXI1	Q12951	378 aa		4.6	□□□□□ -1.67
DENND4A-205	ENST00000562540	TAS1R1	Q7RTX1	841 aa		4.6	□□□□□ -1.67
DENND4A-205	ENST00000562540	GPRIN1	Q7Z2K8	1008 aa		4.6	□□□□□ -1.67
DENND4A-205	ENST00000562540	BOLL	Q8N9W6	283 aa	Known RBP	4.6	□□□□□ -1.67
DENND4A-205	ENST00000562540	SIMC1	Q8NDZ2	872 aa		4.6	□□□□□ -1.67
DENND4A-205	ENST00000562540	OR10H5	Q8NGA6	315 aa		4.6	□□□□□ -1.67
DENND4A-205	ENST00000562540	TEX101	Q9BY14	249 aa		4.6	□□□□□ -1.67
DENND4A-205	ENST00000562540	USP18	Q9UMW8	372 aa		4.6	□□□□□ -1.67
DENND4A-205	ENST00000562540	ELL2	O00472	640 aa	Predicted RBP	4.59	□□□□□ -1.67
DENND4A-205	ENST00000562540	NRP2	O60462	931 aa		4.59	□□□□□ -1.67
DENND4A-205	ENST00000562540	SEC24D	O94855	1032 aa	Predicted RBP	4.59	□□□□□ -1.67
DENND4A-205	ENST00000562540	C1R	P00736	705 aa		4.59	□□□□□ -1.67
DENND4A-205	ENST00000562540	XPA	P23025	273 aa	Predicted RBP	4.59	□□□□□ -1.67
DENND4A-205	ENST00000562540	PLA2G5	P39877	138 aa		4.59	□□□□□ -1.67
DENND4A-205	ENST00000562540	ELL	P55199	621 aa	Predicted RBP	4.59	□□□□□ -1.67
DENND4A-205	ENST00000562540	TP53BP2	Q13625	1128 aa		4.59	□□□□□ -1.67
DENND4A-205	ENST00000562540	BMS1	Q14692	1282 aa	Known RBP	4.59	□□□□□ -1.67
DENND4A-205	ENST00000562540	NFE2L2	Q16236	605 aa		4.59	□□□□□ -1.67
DENND4A-205	ENST00000562540	DDB1	Q16531	1140 aa		4.59	□□□□□ -1.67
DENND4A-205	ENST00000562540	PDCD4	Q53EL6	469 aa	Known RBP	4.59	□□□□□ -1.67
DENND4A-205	ENST00000562540	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.59	□□□□□ -1.67
DENND4A-205	ENST00000562540	LCE1A	Q5T7P2	110 aa		4.59	□□□□□ -1.67
DENND4A-205	ENST00000562540	CDCA2	Q69YH5	1023 aa	Predicted RBP	4.59	□□□□□ -1.67
DENND4A-205	ENST00000562540	SYT12	Q8IV01	421 aa		4.59	□□□□□ -1.67
DENND4A-205	ENST00000562540	MSL3	Q8N5Y2	521 aa	Known RBP	4.59	□□□□□ -1.67
DENND4A-205	ENST00000562540	MKL1	Q969V6	931 aa		4.59	□□□□□ -1.67
DENND4A-205	ENST00000562540	SPATA5L1	Q9BVQ7	753 aa		4.59	□□□□□ -1.67
DENND4A-205	ENST00000562540	H2AFY2	Q9P0M6	372 aa	Predicted RBP	4.59	□□□□□ -1.67
DENND4A-205	ENST00000562540	ZNF185	O15231	689 aa		4.58	□□□□□ -1.68
DENND4A-205	ENST00000562540	NRG3	P56975	720 aa		4.58	□□□□□ -1.68
DENND4A-205	ENST00000562540	MXRA7	P84157	204 aa		4.58	□□□□□ -1.68
DENND4A-205	ENST00000562540	MGAT5	Q09328	741 aa		4.58	□□□□□ -1.68
DENND4A-205	ENST00000562540	CFAP100	Q494V2	611 aa		4.58	□□□□□ -1.68
DENND4A-205	ENST00000562540	ABHD17B	Q5VST6	288 aa		4.58	□□□□□ -1.68
DENND4A-205	ENST00000562540	SP5	Q6BEB4	398 aa	Predicted RBP	4.58	□□□□□ -1.68
DENND4A-205	ENST00000562540	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.58	□□□□□ -1.68
DENND4A-205	ENST00000562540	LMBR1L	Q6UX01	489 aa		4.58	□□□□□ -1.68
DENND4A-205	ENST00000562540	ESPNL	Q6ZVH7	1005 aa		4.58	□□□□□ -1.68
DENND4A-205	ENST00000562540	ASB10	Q8WXI3	467 aa		4.58	□□□□□ -1.68
DENND4A-205	ENST00000562540	FDXACB1	Q9BRP7	624 aa	Predicted RBP	4.58	□□□□□ -1.68

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