RNA–Protein interactions for RNA: ENST00000562038.1

LINC01963-201, Transcript of long intergenic non-protein coding RNA 1963, humanhuman

BASIC

Gene LINC01963, Length 3,148 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01963-201ENST00000562038 SURF1Q15526 300 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 L1TD1Q5T7N2 865 aaKnown RBP6.2□□□□□ -1.42
LINC01963-201ENST00000562038 SHC4Q6S5L8 630 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 SV2BQ7L1I2 683 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 EEPD1Q7L9B9 569 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 HDAC7Q8WUI4 952 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 PIBF1Q8WXW3 757 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 DNAJC19Q96DA6 116 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 GBP4Q96PP9 640 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 GSDMAQ96QA5 445 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 FIZ1Q96SL8 496 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 IFT122Q9HBG6 1241 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 BMP2KQ9NSY1 1161 aaPredicted RBP6.2□□□□□ -1.42
LINC01963-201ENST00000562038 GJB4Q9NTQ9 266 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 DDX19AQ9NUU7 478 aaKnown RBP6.2□□□□□ -1.42
LINC01963-201ENST00000562038 CACNA2D2Q9NY47 1150 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 KANSL3Q9P2N6 904 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 ZMYND8Q9ULU4 1186 aaPredicted RBP6.2□□□□□ -1.42
LINC01963-201ENST00000562038 GIT1Q9Y2X7 761 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 CDY2AQ9Y6F7 541 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 TCF20Q9UGU0 1960 aaKnown RBP6.2□□□□□ -1.42
LINC01963-201ENST00000562038 EVPLQ92817 2033 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 A0A1B0GUA9 196 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 CCDC189A1A4V9 331 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 DDX11L8A8MPP1 907 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 C9IYK1 514 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 TREHO43280 583 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 RHOBTB3O94955 611 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 GLRA2P23416 452 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 DNAJB2P25686 324 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 AP3M2P53677 418 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 SHC2P98077 582 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 MCL1Q07820 350 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 LAMTOR4Q0VGL1 99 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 IKBKEQ14164 716 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 POSTNQ15063 836 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 TMEM63BQ5T3F8 832 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 EFCAB12Q6NXP0 572 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 PDXDC1Q6P996 788 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 CYP26C1Q6V0L0 522 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 RUFY4Q6ZNE9 571 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 SND1Q7KZF4 910 aaKnown RBP eCLIP6.2□□□□□ -1.42
LINC01963-201ENST00000562038 LENG1Q96BZ8 264 aaPredicted RBP6.2□□□□□ -1.42
LINC01963-201ENST00000562038 CDK5RAP3Q96JB5 506 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 CEP170P1Q96L14 293 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 CEP295NLQ96MC4 621 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 LARP6Q9BRS8 491 aaKnown RBP6.2□□□□□ -1.42
LINC01963-201ENST00000562038 SUCLA2Q9P2R7 463 aaPredicted RBP6.2□□□□□ -1.42
LINC01963-201ENST00000562038 PCDHA7Q9UN72 937 aa6.2□□□□□ -1.42
LINC01963-201ENST00000562038 KIF26AQ9ULI4 1882 aaPredicted RBP6.2□□□□□ -1.42
LINC01963-201ENST00000562038 ABLIM1O14639 778 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 NBNO60934 754 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 MBD3O95983 291 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 FGBP02675 491 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 RAG1P15918 1043 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 SMTNP53814 917 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 MDM2Q00987 491 aaPredicted RBP6.19□□□□□ -1.42
LINC01963-201ENST00000562038 DMP1Q13316 513 aaPredicted RBP6.19□□□□□ -1.42
LINC01963-201ENST00000562038 GIT2Q14161 759 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 ZNF618Q5T7W0 954 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 RRAGBQ5VZM2 374 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 MCTP1Q6DN14 999 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 CCDC65Q8IXS2 484 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 FMR1NBQ8N0W7 255 aaPredicted RBP6.19□□□□□ -1.42
LINC01963-201ENST00000562038 ZNF507Q8TCN5 953 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 CCDC47Q96A33 483 aaKnown RBP6.19□□□□□ -1.42
LINC01963-201ENST00000562038 PARVGQ9HBI0 331 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 A0A0U1RQF3 1178 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 POTEMA6NI47 508 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 NCK2O43639 380 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 CAVIN2O95810 425 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 LDHAP00338 332 aaKnown RBP6.19□□□□□ -1.42
LINC01963-201ENST00000562038 KCNE1P15382 129 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 PLCG1P19174 1290 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 GRM5P41594 1212 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 PSMC6P62333 389 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 CLDN10P78369 228 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 NCBP1Q09161 790 aaKnown RBP6.19□□□□□ -1.42
LINC01963-201ENST00000562038 CAPSQ13938 189 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 MBTPS1Q14703 1052 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 XKR9Q5GH70 373 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 UTP14CQ5TAP6 766 aaKnown RBP6.19□□□□□ -1.42
LINC01963-201ENST00000562038 NOTUMQ6P988 496 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 SLC24A5Q71RS6 500 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 DAW1Q8N136 415 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 MICALL1Q8N3F8 863 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 SPOCK2Q92563 424 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 MKNK1Q9BUB5 465 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 TMEM117Q9H0C3 514 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 SETD4Q9NVD3 440 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 HSFX1Q9UBD0 423 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 PIEZO1Q92508 2521 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 VWA3AA6NCI4 1184 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 ADGRE1Q14246 886 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 EDRF1Q3B7T1 1238 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 ARSHQ5FYA8 562 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 FAM228AQ86W67 206 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 RNF168Q8IYW5 571 aaPredicted RBP6.19□□□□□ -1.42
LINC01963-201ENST00000562038 OTUD6BQ8N6M0 293 aa6.19□□□□□ -1.42
LINC01963-201ENST00000562038 KIAA1958Q8N8K9 716 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms