RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 DDX53Q86TM3 631 aaKnown RBP5.06□□□□□ -1.6
USP8-216ENST00000561206 PLXDC1Q8IUK5 500 aa5.06□□□□□ -1.6
USP8-216ENST00000561206 CHST14Q8NCH0 376 aa5.06□□□□□ -1.6
USP8-216ENST00000561206 DYDC2Q96IM9 177 aa5.06□□□□□ -1.6
USP8-216ENST00000561206 C8orf37Q96NL8 207 aa5.06□□□□□ -1.6
USP8-216ENST00000561206 SRPK1Q96SB4 655 aaKnown RBP5.06□□□□□ -1.6
USP8-216ENST00000561206 ACSS2Q9NR19 701 aa5.06□□□□□ -1.6
USP8-216ENST00000561206 CACNA1IQ9P0X4 2223 aa5.05□□□□□ -1.6
USP8-216ENST00000561206 B4E1Z4 1266 aa5.05□□□□□ -1.6
USP8-216ENST00000561206 NDUFA10O95299 355 aa5.05□□□□□ -1.6
USP8-216ENST00000561206 KLHL22Q53GT1 634 aa5.05□□□□□ -1.6
USP8-216ENST00000561206 PRAMEF9Q5VWM5 478 aa5.05□□□□□ -1.6
USP8-216ENST00000561206 ZNF384Q8TF68 577 aa5.05□□□□□ -1.6
USP8-216ENST00000561206 MKL1Q969V6 931 aa5.05□□□□□ -1.6
USP8-216ENST00000561206 PCIF1Q9H4Z3 704 aa5.05□□□□□ -1.6
USP8-216ENST00000561206 TRPM5Q9NZQ8 1165 aa5.05□□□□□ -1.6
USP8-216ENST00000561206 SAMD15Q9P1V8 674 aa5.05□□□□□ -1.6
USP8-216ENST00000561206 MARCH11A6NNE9 402 aa5.04□□□□□ -1.6
USP8-216ENST00000561206 DIRC3C9JPN6 131 aa5.04□□□□□ -1.6
USP8-216ENST00000561206 E9PSI1 815 aa5.04□□□□□ -1.6
USP8-216ENST00000561206 PLD2O14939 933 aa5.04□□□□□ -1.6
USP8-216ENST00000561206 CYP17A1P05093 508 aa5.04□□□□□ -1.6
USP8-216ENST00000561206 ZSCAN20P17040 1043 aaPredicted RBP5.04□□□□□ -1.6
USP8-216ENST00000561206 IGFALSP35858 605 aa5.04□□□□□ -1.6
USP8-216ENST00000561206 MYBPC3Q14896 1274 aa5.04□□□□□ -1.6
USP8-216ENST00000561206 EPHA7Q15375 998 aa5.04□□□□□ -1.6
USP8-216ENST00000561206 DOK3Q7L591 496 aa5.04□□□□□ -1.6
USP8-216ENST00000561206 NME9Q86XW9 330 aa5.04□□□□□ -1.6
USP8-216ENST00000561206 ADAM2Q99965 735 aa5.04□□□□□ -1.6
USP8-216ENST00000561206 CPPED1Q9BRF8 314 aaPredicted RBP5.04□□□□□ -1.6
USP8-216ENST00000561206 KRTAP4-4Q9BYR3 166 aa5.04□□□□□ -1.6
USP8-216ENST00000561206 PITHD1Q9GZP4 211 aaPredicted RBP5.04□□□□□ -1.6
USP8-216ENST00000561206 DNAI1Q9UI46 699 aa5.04□□□□□ -1.6
USP8-216ENST00000561206 LRRC3CA6NJW4 275 aa5.03□□□□□ -1.6
USP8-216ENST00000561206 H7C1D1 291 aa5.03□□□□□ -1.6
USP8-216ENST00000561206 RAPGEF3O95398 923 aa5.03□□□□□ -1.6
USP8-216ENST00000561206 PTX3P26022 381 aaPredicted RBP5.03□□□□□ -1.6
USP8-216ENST00000561206 BCAR1P56945 870 aa5.03□□□□□ -1.6
USP8-216ENST00000561206 ZNF169Q14929 603 aaPredicted RBP5.03□□□□□ -1.6
USP8-216ENST00000561206 FAM214AQ32MH5 1076 aa5.03□□□□□ -1.6
USP8-216ENST00000561206 FAM83AQ86UY5 434 aa5.03□□□□□ -1.6
USP8-216ENST00000561206 KIAA1958Q8N8K9 716 aa5.03□□□□□ -1.6
USP8-216ENST00000561206 RPGRQ92834 1020 aaKnown RBP5.03□□□□□ -1.6
USP8-216ENST00000561206 TUBGCP5Q96RT8 1024 aa5.03□□□□□ -1.6
USP8-216ENST00000561206 PTPDC1A2A3K4 754 aa5.02□□□□□ -1.61
USP8-216ENST00000561206 TRIM38O00635 465 aa5.02□□□□□ -1.61
USP8-216ENST00000561206 DNAJC6O75061 913 aa5.02□□□□□ -1.61
USP8-216ENST00000561206 CBSLP0DN79 551 aa5.02□□□□□ -1.61
USP8-216ENST00000561206 HNRNPLP14866 589 aaKnown RBP eCLIP5.02□□□□□ -1.61
USP8-216ENST00000561206 CBSP35520 551 aa5.02□□□□□ -1.61
USP8-216ENST00000561206 RARRES1P49788 294 aa5.02□□□□□ -1.61
USP8-216ENST00000561206 SIM1P81133 766 aaPredicted RBP5.02□□□□□ -1.61
USP8-216ENST00000561206 OCA2Q04671 838 aa5.02□□□□□ -1.61
USP8-216ENST00000561206 KANSL1Q7Z3B3 1105 aa5.02□□□□□ -1.61
USP8-216ENST00000561206 CPEB3Q8NE35 698 aaKnown RBP5.02□□□□□ -1.61
USP8-216ENST00000561206 ASB10Q8WXI3 467 aa5.02□□□□□ -1.61
USP8-216ENST00000561206 CLUHP3Q96NS8 147 aa5.02□□□□□ -1.61
USP8-216ENST00000561206 LSM14BQ9BX40 385 aaKnown RBP5.02□□□□□ -1.61
USP8-216ENST00000561206 CABP5Q9NP86 173 aa5.02□□□□□ -1.61
USP8-216ENST00000561206 A0A0A6YYJ9 748 aa5.01□□□□□ -1.61
USP8-216ENST00000561206 DAPK3O43293 454 aa5.01□□□□□ -1.61
USP8-216ENST00000561206 DNAJC8O75937 253 aaPredicted RBP5.01□□□□□ -1.61
USP8-216ENST00000561206 ASLP04424 464 aa5.01□□□□□ -1.61
USP8-216ENST00000561206 DDX6P26196 483 aaKnown RBP eCLIP5.01□□□□□ -1.61
USP8-216ENST00000561206 CACNA2D1P54289 1103 aa5.01□□□□□ -1.61
USP8-216ENST00000561206 WNT3AP56704 352 aa5.01□□□□□ -1.61
USP8-216ENST00000561206 SRSF4Q08170 494 aaKnown RBP5.01□□□□□ -1.61
USP8-216ENST00000561206 ZNF460Q14592 562 aa5.01□□□□□ -1.61
USP8-216ENST00000561206 ZNF174Q15697 407 aa5.01□□□□□ -1.61
USP8-216ENST00000561206 FNDC3BQ53EP0 1204 aaKnown RBP5.01□□□□□ -1.61
USP8-216ENST00000561206 ESRP1Q6NXG1 681 aaKnown RBP5.01□□□□□ -1.61
USP8-216ENST00000561206 LILRB2Q8N423 598 aa5.01□□□□□ -1.61
USP8-216ENST00000561206 MTG2Q9H4K7 406 aa5.01□□□□□ -1.61
USP8-216ENST00000561206 NCDNQ9UBB6 729 aa5.01□□□□□ -1.61
USP8-216ENST00000561206 TNPO3Q9Y5L0 923 aaKnown RBP5.01□□□□□ -1.61
USP8-216ENST00000561206 SALL3Q9BXA9 1300 aa5□□□□□ -1.61
USP8-216ENST00000561206 LEFTY2O00292 366 aa5□□□□□ -1.61
USP8-216ENST00000561206 NRP1O14786 923 aa5□□□□□ -1.61
USP8-216ENST00000561206 RANGAP1P46060 587 aaPredicted RBP5□□□□□ -1.61
USP8-216ENST00000561206 TP53BP2Q13625 1128 aa5□□□□□ -1.61
USP8-216ENST00000561206 DDB1Q16531 1140 aa5□□□□□ -1.61
USP8-216ENST00000561206 SOGA3Q5TF21 947 aa5□□□□□ -1.61
USP8-216ENST00000561206 CREB3L3Q68CJ9 461 aa5□□□□□ -1.61
USP8-216ENST00000561206 GPRIN1Q7Z2K8 1008 aa5□□□□□ -1.61
USP8-216ENST00000561206 PHYKPLQ8IUZ5 450 aa5□□□□□ -1.61
USP8-216ENST00000561206 C7orf31Q8N865 590 aa5□□□□□ -1.61
USP8-216ENST00000561206 OSBPL6Q9BZF3 934 aa5□□□□□ -1.61
USP8-216ENST00000561206 B4GALT6Q9UBX8 382 aa5□□□□□ -1.61
USP8-216ENST00000561206 WIPF3A6NGB9 483 aa4.99□□□□□ -1.61
USP8-216ENST00000561206 CBX4O00257 560 aa4.99□□□□□ -1.61
USP8-216ENST00000561206 OPA1O60313 960 aa4.99□□□□□ -1.61
USP8-216ENST00000561206 OPHN1O60890 802 aa4.99□□□□□ -1.61
USP8-216ENST00000561206 ADCY2Q08462 1091 aa4.99□□□□□ -1.61
USP8-216ENST00000561206 ADCY1Q08828 1119 aa4.99□□□□□ -1.61
USP8-216ENST00000561206 KIAA1614Q5VZ46 1190 aa4.99□□□□□ -1.61
USP8-216ENST00000561206 ELF4Q99607 663 aaPredicted RBP4.99□□□□□ -1.61
USP8-216ENST00000561206 SOX7Q9BT81 388 aa4.99□□□□□ -1.61
USP8-216ENST00000561206 SYNPO2Q9UMS6 1093 aa4.99□□□□□ -1.61
USP8-216ENST00000561206 SPO11Q9Y5K1 396 aa4.99□□□□□ -1.61
USP8-216ENST00000561206 UNC119BA6NIH7 251 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms