RNA–Protein interactions for RNA: ENST00000560878.1

SPG21-212, Transcript of SPG21, maspardin, humanhuman

TSL 5

Gene SPG21, Length 541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-212ENST00000560878 H3BQV1 296 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 MEIS2O14770 477 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 PPFIA4O75335 1185 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 BAG4O95429 457 aaKnown RBP5.45□□□□□ -1.54
SPG21-212ENST00000560878 GGPS1O95749 300 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 TGFB1P01137 390 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 SUPT20HL2P0C7V6 817 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 RAG1P15918 1043 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 EDNRBP24530 442 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 GRIK1P39086 918 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 RBM25P49756 843 aaKnown RBP5.45□□□□□ -1.54
SPG21-212ENST00000560878 RTP1P59025 263 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 HMGN5P82970 282 aaKnown RBP5.45□□□□□ -1.54
SPG21-212ENST00000560878 GSTM4Q03013 218 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 SOX4Q06945 474 aaPredicted RBP5.45□□□□□ -1.54
SPG21-212ENST00000560878 UTP14CQ5TAP6 766 aaKnown RBP5.45□□□□□ -1.54
SPG21-212ENST00000560878 CXCL17Q6UXB2 119 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 SLC39A5Q6ZMH5 540 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 CYFIP1Q7L576 1253 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 DTX1Q86Y01 620 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 CCDC83Q8IWF9 413 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 BLIDQ8IZY5 108 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 C12orf50Q8NA57 414 aaPredicted RBP5.45□□□□□ -1.54
SPG21-212ENST00000560878 C2CD4AQ8NCU7 369 aaPredicted RBP5.45□□□□□ -1.54
SPG21-212ENST00000560878 AFG1LQ8WV93 481 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 GLG1Q92896 1179 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 GTF3C6Q969F1 213 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 GPRASP2Q96D09 838 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 NAP1L4Q99733 375 aaKnown RBP5.45□□□□□ -1.54
SPG21-212ENST00000560878 TRIM56Q9BRZ2 755 aaKnown RBP5.45□□□□□ -1.54
SPG21-212ENST00000560878 ALG1Q9BT22 464 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 ANO3Q9BYT9 981 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 ZMYND12Q9H0C1 365 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 ABCB6Q9NP58 842 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 NPHS2Q9NP85 383 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 TMEM39AQ9NV64 488 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 COL20A1Q9P218 1284 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 ZNF215Q9UL58 517 aaPredicted RBP5.45□□□□□ -1.54
SPG21-212ENST00000560878 PCDHA4Q9UN74 947 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 SAMM50Q9Y512 469 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.45□□□□□ -1.54
SPG21-212ENST00000560878 PDE4DIPQ5VU43 2346 aa5.45□□□□□ -1.54
SPG21-212ENST00000560878 RBM47A0AV96 593 aaKnown RBP5.44□□□□□ -1.54
SPG21-212ENST00000560878 ESYT2A0FGR8 921 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 SMCHD1A6NHR9 2005 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 H0YGN5 161 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 ARVCFO00192 962 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 CEP290O15078 2479 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 GAS2O43903 313 aaKnown RBP5.44□□□□□ -1.54
SPG21-212ENST00000560878 MED26O95402 600 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 GNAT1P11488 350 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 SYN1P17600 705 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 CST5P28325 142 aaPredicted RBP5.44□□□□□ -1.54
SPG21-212ENST00000560878 KRT2P35908 639 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 USP11P51784 963 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 SETQ01105 290 aaPredicted RBP5.44□□□□□ -1.54
SPG21-212ENST00000560878 GHRHRQ02643 423 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 TLE2Q04725 743 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 SCRN1Q12765 414 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 ITGA7Q13683 1181 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 DSC3Q14574 896 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 NONOQ15233 471 aaKnown RBP eCLIP5.44□□□□□ -1.54
SPG21-212ENST00000560878 POU4F3Q15319 338 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 ME3Q16798 604 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 LRRC26Q2I0M4 334 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 SLC35G1Q2M3R5 365 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 CEP55Q53EZ4 464 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 PRR16Q569H4 304 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 CELF3Q5SZQ8 465 aaKnown RBP5.44□□□□□ -1.54
SPG21-212ENST00000560878 FAM160B1Q5W0V3 765 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 MCTP1Q6DN14 999 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 PLA2G4DQ86XP0 818 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 CKAP2LQ8IYA6 745 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 GLIS3Q8NEA6 775 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 PPTC7Q8NI37 304 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 COPS5Q92905 334 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 PGBD1Q96JS3 809 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 C8orf76Q96K31 380 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 FGD4Q96M96 766 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 MXRA8Q9BRK3 442 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 LLPHQ9BRT6 129 aaKnown RBP5.44□□□□□ -1.54
SPG21-212ENST00000560878 ZNF577Q9BSK1 485 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 BACH2Q9BYV9 841 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 NIF3L1Q9GZT8 377 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 UPF3AQ9H1J1 476 aaKnown RBP5.44□□□□□ -1.54
SPG21-212ENST00000560878 JADE2Q9NQC1 790 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 TBC1D22BQ9NU19 505 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 PCMTD2Q9NV79 361 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 TMEM260Q9NX78 707 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 DDX41Q9UJV9 622 aaKnown RBP5.44□□□□□ -1.54
SPG21-212ENST00000560878 DCTN4Q9UJW0 460 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 ZMYND8Q9ULU4 1186 aaPredicted RBP5.44□□□□□ -1.54
SPG21-212ENST00000560878 SMC3Q9UQE7 1217 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 STK36Q9NRP7 1315 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 MCM3APO60318 1980 aa5.44□□□□□ -1.54
SPG21-212ENST00000560878 NID2Q14112 1375 aa5.43□□□□□ -1.54
SPG21-212ENST00000560878 RBBP6Q7Z6E9 1792 aaKnown RBP5.43□□□□□ -1.54
SPG21-212ENST00000560878 TMEM238LA0A1B0GVL6 79 aa5.43□□□□□ -1.54
SPG21-212ENST00000560878 DDX39AO00148 427 aaKnown RBP5.43□□□□□ -1.54
SPG21-212ENST00000560878 CCNT1O60563 726 aaKnown RBP5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms