RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 CABYRO75952 493 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 MYL3P08590 195 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 C6orf222P0C671 652 aaPredicted RBP12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 ADSSP30520 456 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 KRT9P35527 623 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 FMO5P49326 533 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 CLCN3P51790 818 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 CDK17Q00537 523 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 PURAQ00577 322 aaKnown RBP12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 CACNB2Q08289 660 aaPredicted RBP12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 DRP2Q13474 957 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 SURF1Q15526 300 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 DNTTIP2Q5QJE6 756 aaKnown RBP12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 MAP3K21Q5TCX8 1036 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 SMYD5Q6GMV2 418 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 TAF2Q6P1X5 1199 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 NME8Q8N427 588 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 PCSK9Q8NBP7 692 aaKnown RBP12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 TRPV1Q8NER1 839 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 TRAPPC12Q8WVT3 735 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 SYN2Q92777 582 aaPredicted RBP12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 KAT2BQ92831 832 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 MFSD14AQ96MC6 490 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 NLRP4Q96MN2 994 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 DNAJC7Q99615 494 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 BEGAINQ9BUH8 593 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 INO80BQ9C086 356 aaPredicted RBP12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 FZD8Q9H461 694 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 MMRN2Q9H8L6 949 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 SIP14410 1827 aa12.89□□□□□ -0.35
AC087878.1-201ENST00000560709 A0A0B4J269 797 aa12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 TTC26A0AVF1 554 aa12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 C17orf102A2RUQ5 167 aa12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 ANKRD63C9JTQ0 380 aa12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 CLDN3O15551 220 aa12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 OFD1O75665 1012 aa12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 SRGAP2CP0DJJ0 459 aa12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 PRKAR2AP13861 404 aaKnown RBP12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 HOXC8P31273 242 aa12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 FXR1P51114 621 aaKnown RBP eCLIP12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 AP3M2P53677 418 aa12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 MYL7Q01449 175 aa12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 GNASQ5JWF2 1037 aa12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 SLC39A4Q6P5W5 647 aa12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 CYP26C1Q6V0L0 522 aa12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 TSHZ1Q6ZSZ6 1077 aa12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 CACNA2D4Q7Z3S7 1137 aa12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 LMBR1Q8WVP7 490 aa12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 FAM81BQ96LP2 452 aa12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 LSM14BQ9BX40 385 aaKnown RBP12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 PCIF1Q9H4Z3 704 aa12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 XPNPEP3Q9NQH7 507 aa12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 PLSCR2Q9NRY7 297 aa12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 AGO2Q9UKV8 859 aaKnown RBP12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 TNFSF13BQ9Y275 285 aa12.88□□□□□ -0.35
AC087878.1-201ENST00000560709 INO80B-WBP1J3KQ70 363 aa12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 HNRNPH3P31942 346 aaKnown RBP12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 MATR3P43243 847 aaKnown RBP eCLIP12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 GPC3P51654 580 aa12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 ADKP55263 362 aaKnown RBP12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 ADAM17P78536 824 aa12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 MBTD1Q05BQ5 628 aa12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 MCL1Q07820 350 aa12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 CYP24A1Q07973 514 aa12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 NCBP1Q09161 790 aaKnown RBP12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 PRPF4BQ13523 1007 aaKnown RBP12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 PSMD6Q15008 389 aa12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 MEA1Q16626 185 aa12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 MARCH8Q5T0T0 291 aa12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 MPZL3Q6UWV2 235 aa12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 RNF180Q86T96 592 aa12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 SESTD1Q86VW0 696 aa12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 C7orf31Q8N865 590 aa12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 CPLX3Q8WVH0 158 aa12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 NLRP7Q8WX94 980 aa12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 SCLT1Q96NL6 688 aa12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 ACO2Q99798 780 aaKnown RBP12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 MSTO1Q9BUK6 570 aa12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 TARS2Q9BW92 718 aaKnown RBP12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 GCOM2Q9BZD3 368 aaPredicted RBP12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 TMEM8AQ9HCN3 771 aa12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 FAM207AQ9NSI2 230 aaPredicted RBP12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 SETD4Q9NVD3 440 aa12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 GCNT4Q9P109 453 aa12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 DDX20Q9UHI6 824 aaKnown RBP12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 CNTNAP2Q9UHC6 1331 aa12.87□□□□□ -0.35
AC087878.1-201ENST00000560709 OGTO15294 1046 aa12.86□□□□□ -0.35
AC087878.1-201ENST00000560709 ADAMTS4O75173 837 aa12.86□□□□□ -0.35
AC087878.1-201ENST00000560709 CCDC172P0C7W6 258 aa12.86□□□□□ -0.35
AC087878.1-201ENST00000560709 CYP2C9P11712 490 aa12.86□□□□□ -0.35
AC087878.1-201ENST00000560709 PROZP22891 400 aa12.86□□□□□ -0.35
AC087878.1-201ENST00000560709 AXLP30530 894 aa12.86□□□□□ -0.35
AC087878.1-201ENST00000560709 MXI1P50539 228 aa12.86□□□□□ -0.35
AC087878.1-201ENST00000560709 BEX3Q00994 111 aa12.86□□□□□ -0.35
AC087878.1-201ENST00000560709 PTPN11Q06124 597 aaPredicted RBP12.86□□□□□ -0.35
AC087878.1-201ENST00000560709 KCNMA1Q12791 1236 aa12.86□□□□□ -0.35
AC087878.1-201ENST00000560709 ATF7IP2Q5U623 682 aa12.86□□□□□ -0.35
AC087878.1-201ENST00000560709 KRT39Q6A163 491 aa12.86□□□□□ -0.35
AC087878.1-201ENST00000560709 RSPH3Q86UC2 560 aa12.86□□□□□ -0.35
AC087878.1-201ENST00000560709 CBWD2Q8IUF1 395 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms