RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 AGPAT5Q9NUQ2 364 aa11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 CNTNAP2Q9UHC6 1331 aa11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 MYH15Q9Y2K3 1946 aa11.74□□□□□ -0.53
CDC42BPB-207ENST00000560492 ZNF623O75123 536 aa11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 MAFO75444 373 aaPredicted RBP11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 NR1I2O75469 434 aa11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 RFPL2O75678 378 aa11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 PSMD10O75832 226 aa11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 SOD2P04179 222 aa11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 DCNP07585 359 aaKnown RBP11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 HOXB3P14651 431 aaPredicted RBP11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 GLUD2P49448 558 aa11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 PSMC5P62195 406 aa11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 ZC3H14Q6PJT7 736 aaKnown RBP11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 DGLUCYQ7Z3D6 616 aa11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 PALB2Q86YC2 1186 aa11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 TRIM22Q8IYM9 498 aa11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 DOCK8Q8NF50 2099 aa11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 ST13P5Q8NFI4 369 aaPredicted RBP11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 PSPC1Q8WXF1 523 aaKnown RBP11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 CEP170P1Q96L14 293 aa11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 RPS6KC1Q96S38 1066 aa11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 HERC2P3Q9BVR0 1158 aa11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 RNF26Q9BY78 433 aaPredicted RBP11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 TRIM6Q9C030 488 aaPredicted RBP11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 NCOA5Q9HCD5 579 aaKnown RBP11.73□□□□□ -0.53
CDC42BPB-207ENST00000560492 KRBA1A5PL33 1030 aa11.72□□□□□ -0.53
CDC42BPB-207ENST00000560492 TEX28O15482 410 aa11.72□□□□□ -0.53
CDC42BPB-207ENST00000560492 DKC1O60832 514 aaKnown RBP eCLIP11.72□□□□□ -0.53
CDC42BPB-207ENST00000560492 SRFP11831 508 aa11.72□□□□□ -0.53
CDC42BPB-207ENST00000560492 MLH1P40692 756 aa11.72□□□□□ -0.53
CDC42BPB-207ENST00000560492 AFF1P51825 1210 aaKnown RBP11.72□□□□□ -0.53
CDC42BPB-207ENST00000560492 EMP3P54852 163 aa11.72□□□□□ -0.53
CDC42BPB-207ENST00000560492 NPEPPSP55786 919 aa11.72□□□□□ -0.53
CDC42BPB-207ENST00000560492 NCBP1Q09161 790 aaKnown RBP11.72□□□□□ -0.53
CDC42BPB-207ENST00000560492 MMRN1Q13201 1228 aa11.72□□□□□ -0.53
CDC42BPB-207ENST00000560492 SPNS2Q8IVW8 549 aa11.72□□□□□ -0.53
CDC42BPB-207ENST00000560492 GPR152Q8TDT2 470 aa11.72□□□□□ -0.53
CDC42BPB-207ENST00000560492 TMEM143Q96AN5 459 aa11.72□□□□□ -0.53
CDC42BPB-207ENST00000560492 MYADMQ96S97 322 aa11.72□□□□□ -0.53
CDC42BPB-207ENST00000560492 SEMA4AQ9H3S1 761 aa11.72□□□□□ -0.53
CDC42BPB-207ENST00000560492 WDR6Q9NNW5 1121 aaKnown RBP11.72□□□□□ -0.53
CDC42BPB-207ENST00000560492 WNT16Q9UBV4 365 aa11.72□□□□□ -0.53
CDC42BPB-207ENST00000560492 DDX25Q9UHL0 483 aaKnown RBP11.72□□□□□ -0.53
CDC42BPB-207ENST00000560492 IGKV6-21A0A0C4DH24 114 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 CPLX1O14810 134 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 N4BP1O75113 896 aaKnown RBP11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 CDC45O75419 566 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 QARSP47897 775 aaKnown RBP11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 SCNN1GP51170 649 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 SSRP1Q08945 709 aaKnown RBP11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 TSGA10IPQ3SY00 556 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 Q4G0T1 1027 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 BMP2KLQ5H9B9 411 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 ANO5Q75V66 913 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 TAS1R1Q7RTX1 841 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 SRGAP1Q7Z6B7 1085 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 SKAP1Q86WV1 359 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 EXOC8Q8IYI6 725 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 HACE1Q8IYU2 909 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 BLIDQ8IZY5 108 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 SLC44A3Q8N4M1 653 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 RNF149Q8NC42 400 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 CNNM3Q8NE01 707 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 CMASQ8NFW8 434 aaPredicted RBP11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 PRPF31Q8WWY3 499 aaKnown RBP11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 RMDN1Q96DB5 314 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 B3GALT6Q96L58 329 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 CCDC43Q96MW1 224 aaKnown RBP11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 GAD1Q99259 594 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 IFT122Q9HBG6 1241 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 UBN1Q9NPG3 1134 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 SH3GLB2Q9NR46 395 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 ARHGEF3Q9NR81 526 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 PCDHA4Q9UN74 947 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 SIT1Q9Y3P8 196 aa11.71□□□□□ -0.53
CDC42BPB-207ENST00000560492 DCHS1Q96JQ0 3298 aa11.71□□□□□ -0.54
CDC42BPB-207ENST00000560492 WDR87Q6ZQQ6 2873 aa11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 INO80B-WBP1J3KQ70 363 aa11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 GAS2O43903 313 aaKnown RBP11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 STBD1O95210 358 aa11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 IFNAR1P17181 557 aa11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 NCLP19338 710 aaKnown RBP11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 RFC5P40937 340 aa11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 LAMTOR4Q0VGL1 99 aa11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 INF2Q27J81 1249 aa11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 XKR9Q5GH70 373 aa11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 DCLRE1AQ6PJP8 1040 aa11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 CYP26C1Q6V0L0 522 aa11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 MRPL10Q7Z7H8 261 aaKnown RBP11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 TCP11Q8WWU5 503 aa11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 NXPE3Q969Y0 559 aa11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 CPB2Q96IY4 423 aa11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 CEP89Q96ST8 783 aa11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 COLEC11Q9BWP8 271 aa11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 MINDY3Q9H8M7 445 aa11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 MARCH5Q9NX47 278 aa11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 POLIQ9UNA4 740 aa11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 HES2Q9Y543 173 aa11.7□□□□□ -0.54
CDC42BPB-207ENST00000560492 IPPQ9Y573 584 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms