RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 CSDE1O75534 798 aaKnown RBP10.42□□□□□ -0.74
SMAD3-215ENST00000560424 OFD1O75665 1012 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 RETP07949 1114 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 SPATA31D3P0C874 917 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 CALM1P0DP23 149 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 CALM2P0DP24 149 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 CALM3P0DP25 149 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 CD72P21854 359 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 MCM5P33992 734 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 DNM2P50570 870 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 ADCY7P51828 1080 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 NAPAP54920 295 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 TOB2Q14106 344 aaPredicted RBP10.42□□□□□ -0.74
SMAD3-215ENST00000560424 ZNF746Q6NUN9 644 aaPredicted RBP10.42□□□□□ -0.74
SMAD3-215ENST00000560424 SPATA31D4Q6ZUB0 917 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 NIPA1Q7RTP0 329 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 CATSPER4Q7RTX7 472 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 PALB2Q86YC2 1186 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 ZNF280BQ86YH2 543 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 SRBD1Q8N5C6 995 aaKnown RBP10.42□□□□□ -0.74
SMAD3-215ENST00000560424 CELF5Q8N6W0 485 aaKnown RBP10.42□□□□□ -0.74
SMAD3-215ENST00000560424 HDAC7Q8WUI4 952 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 FGF14Q92915 247 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 PRKD2Q9BZL6 878 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 NT5C3AQ9H0P0 336 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 TBC1D22BQ9NU19 505 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 PRG3Q9Y2Y8 225 aaPredicted RBP10.42□□□□□ -0.74
SMAD3-215ENST00000560424 MTF2Q9Y483 593 aaPredicted RBP10.42□□□□□ -0.74
SMAD3-215ENST00000560424 PCDHA10Q9Y5I2 948 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 DOCK8Q8NF50 2099 aa10.42□□□□□ -0.74
SMAD3-215ENST00000560424 CHD8Q9HCK8 2581 aa10.41□□□□□ -0.74
SMAD3-215ENST00000560424 MYH15Q9Y2K3 1946 aa10.41□□□□□ -0.74
SMAD3-215ENST00000560424 ATRXP46100 2492 aa10.41□□□□□ -0.74
SMAD3-215ENST00000560424 LILRB3O75022 631 aa10.41□□□□□ -0.74
SMAD3-215ENST00000560424 OATP04181 439 aa10.41□□□□□ -0.74
SMAD3-215ENST00000560424 PDIA4P13667 645 aaKnown RBP10.41□□□□□ -0.74
SMAD3-215ENST00000560424 TGM1P22735 817 aa10.41□□□□□ -0.74
SMAD3-215ENST00000560424 OR1G1P47890 313 aa10.41□□□□□ -0.74
SMAD3-215ENST00000560424 SETQ01105 290 aaPredicted RBP10.41□□□□□ -0.74
SMAD3-215ENST00000560424 AP3B2Q13367 1082 aa10.41□□□□□ -0.74
SMAD3-215ENST00000560424 PARM1Q6UWI2 310 aa10.41□□□□□ -0.74
SMAD3-215ENST00000560424 ZNF852Q6ZMS4 543 aa10.41□□□□□ -0.74
SMAD3-215ENST00000560424 PRR23CQ6ZRP0 262 aa10.41□□□□□ -0.74
SMAD3-215ENST00000560424 TPRG1Q6ZUI0 275 aa10.41□□□□□ -0.74
SMAD3-215ENST00000560424 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.41□□□□□ -0.74
SMAD3-215ENST00000560424 GLYCTKQ8IVS8 523 aa10.41□□□□□ -0.74
SMAD3-215ENST00000560424 TMTC2Q8N394 836 aa10.41□□□□□ -0.74
SMAD3-215ENST00000560424 ZNF707Q96C28 371 aaPredicted RBP10.41□□□□□ -0.74
SMAD3-215ENST00000560424 TMEM87BQ96K49 555 aa10.41□□□□□ -0.74
SMAD3-215ENST00000560424 DDX23Q9BUQ8 820 aaKnown RBP10.41□□□□□ -0.74
SMAD3-215ENST00000560424 PHF20Q9BVI0 1012 aa10.41□□□□□ -0.74
SMAD3-215ENST00000560424 TRAIPQ9BWF2 469 aa10.41□□□□□ -0.74
SMAD3-215ENST00000560424 RSAD1Q9HA92 442 aa10.41□□□□□ -0.74
SMAD3-215ENST00000560424 CDH7Q9ULB5 785 aa10.41□□□□□ -0.74
SMAD3-215ENST00000560424 USP24Q9UPU5 2620 aa10.41□□□□□ -0.74
SMAD3-215ENST00000560424 CNTNAP2Q9UHC6 1331 aa10.4□□□□□ -0.74
SMAD3-215ENST00000560424 MEIS3P2A8K0S8 358 aa10.4□□□□□ -0.74
SMAD3-215ENST00000560424 DDHD2O94830 711 aa10.4□□□□□ -0.74
SMAD3-215ENST00000560424 POMCP01189 267 aa10.4□□□□□ -0.74
SMAD3-215ENST00000560424 RXRAP19793 462 aa10.4□□□□□ -0.74
SMAD3-215ENST00000560424 SREBF1P36956 1147 aa10.4□□□□□ -0.74
SMAD3-215ENST00000560424 RPS9P46781 194 aaKnown RBP10.4□□□□□ -0.74
SMAD3-215ENST00000560424 CREMQ03060 361 aa10.4□□□□□ -0.74
SMAD3-215ENST00000560424 LIN9Q5TKA1 542 aa10.4□□□□□ -0.74
SMAD3-215ENST00000560424 TEX2Q8IWB9 1127 aa10.4□□□□□ -0.74
SMAD3-215ENST00000560424 LINC01465Q8N7H1 131 aa10.4□□□□□ -0.74
SMAD3-215ENST00000560424 IGDCC4Q8TDY8 1250 aa10.4□□□□□ -0.74
SMAD3-215ENST00000560424 ZNF274Q96GC6 653 aaPredicted RBP10.4□□□□□ -0.74
SMAD3-215ENST00000560424 RPP25Q9BUL9 199 aaKnown RBP10.4□□□□□ -0.74
SMAD3-215ENST00000560424 GLT8D2Q9H1C3 349 aa10.4□□□□□ -0.74
SMAD3-215ENST00000560424 RIC8AQ9NPQ8 531 aa10.4□□□□□ -0.74
SMAD3-215ENST00000560424 PRMT8Q9NR22 394 aaPredicted RBP10.4□□□□□ -0.74
SMAD3-215ENST00000560424 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.4□□□□□ -0.74
SMAD3-215ENST00000560424 SEMA4GQ9NTN9 838 aa10.4□□□□□ -0.74
SMAD3-215ENST00000560424 FAM217BQ9NTX9 383 aaPredicted RBP10.4□□□□□ -0.74
SMAD3-215ENST00000560424 CHMP5Q9NZZ3 219 aa10.4□□□□□ -0.74
SMAD3-215ENST00000560424 POLIQ9UNA4 740 aa10.4□□□□□ -0.74
SMAD3-215ENST00000560424 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.4□□□□□ -0.74
SMAD3-215ENST00000560424 PCDHB2Q9Y5E7 798 aa10.4□□□□□ -0.74
SMAD3-215ENST00000560424 FAM208BQ5VWN6 2430 aa10.4□□□□□ -0.74
SMAD3-215ENST00000560424 CHD6Q8TD26 2715 aa10.4□□□□□ -0.75
SMAD3-215ENST00000560424 A0A087WZ62 844 aa10.39□□□□□ -0.75
SMAD3-215ENST00000560424 WDR64B1ANS9 1081 aa10.39□□□□□ -0.75
SMAD3-215ENST00000560424 TGM5O43548 720 aa10.39□□□□□ -0.75
SMAD3-215ENST00000560424 ZNF623O75123 536 aa10.39□□□□□ -0.75
SMAD3-215ENST00000560424 HSP90AA1P07900 732 aaKnown RBP10.39□□□□□ -0.75
SMAD3-215ENST00000560424 CPA1P15085 419 aa10.39□□□□□ -0.75
SMAD3-215ENST00000560424 TARSP26639 723 aaKnown RBP10.39□□□□□ -0.75
SMAD3-215ENST00000560424 LIFRP42702 1097 aa10.39□□□□□ -0.75
SMAD3-215ENST00000560424 RCAN1P53805 252 aa10.39□□□□□ -0.75
SMAD3-215ENST00000560424 PRKCEQ02156 737 aa10.39□□□□□ -0.75
SMAD3-215ENST00000560424 ADCY1Q08828 1119 aa10.39□□□□□ -0.75
SMAD3-215ENST00000560424 SIM2Q14190 667 aaPredicted RBP10.39□□□□□ -0.75
SMAD3-215ENST00000560424 CSRP2Q16527 193 aa10.39□□□□□ -0.75
SMAD3-215ENST00000560424 ME3Q16798 604 aa10.39□□□□□ -0.75
SMAD3-215ENST00000560424 AASDHQ4L235 1098 aaPredicted RBP10.39□□□□□ -0.75
SMAD3-215ENST00000560424 PPP1R18Q6NYC8 613 aa10.39□□□□□ -0.75
SMAD3-215ENST00000560424 GRASPQ7Z6J2 395 aaPredicted RBP10.39□□□□□ -0.75
SMAD3-215ENST00000560424 ZNF410Q86VK4 478 aa10.39□□□□□ -0.75
SMAD3-215ENST00000560424 RHPN2Q8IUC4 686 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms