RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 HERC2P3Q9BVR0 1158 aa11.65□□□□□ -0.54
APH1B-208ENST00000560353 KANSL3Q9P2N6 904 aa11.65□□□□□ -0.54
APH1B-208ENST00000560353 DMXL2Q8TDJ6 3036 aa11.65□□□□□ -0.55
APH1B-208ENST00000560353 DOCK8Q8NF50 2099 aa11.64□□□□□ -0.55
APH1B-208ENST00000560353 MEIS1O00470 390 aa11.64□□□□□ -0.55
APH1B-208ENST00000560353 FGFR4P22455 802 aa11.64□□□□□ -0.55
APH1B-208ENST00000560353 RAB27AP51159 221 aa11.64□□□□□ -0.55
APH1B-208ENST00000560353 GPC3P51654 580 aa11.64□□□□□ -0.55
APH1B-208ENST00000560353 PDE1AP54750 535 aa11.64□□□□□ -0.55
APH1B-208ENST00000560353 CDC42EP1Q00587 391 aa11.64□□□□□ -0.55
APH1B-208ENST00000560353 HNRNPUQ00839 825 aaKnown RBP eCLIP11.64□□□□□ -0.55
APH1B-208ENST00000560353 TRDNQ13061 729 aa11.64□□□□□ -0.55
APH1B-208ENST00000560353 UBE2SQ16763 222 aa11.64□□□□□ -0.55
APH1B-208ENST00000560353 AASDHQ4L235 1098 aaPredicted RBP11.64□□□□□ -0.55
APH1B-208ENST00000560353 PALB2Q86YC2 1186 aa11.64□□□□□ -0.55
APH1B-208ENST00000560353 LINC01465Q8N7H1 131 aa11.64□□□□□ -0.55
APH1B-208ENST00000560353 NLRP7Q8WX94 980 aa11.64□□□□□ -0.55
APH1B-208ENST00000560353 FGF13Q92913 245 aa11.64□□□□□ -0.55
APH1B-208ENST00000560353 PGBD4Q96DM1 585 aa11.64□□□□□ -0.55
APH1B-208ENST00000560353 LZTS2Q9BRK4 669 aa11.64□□□□□ -0.55
APH1B-208ENST00000560353 DSCC1Q9BVC3 393 aa11.64□□□□□ -0.55
APH1B-208ENST00000560353 PHF20Q9BVI0 1012 aa11.64□□□□□ -0.55
APH1B-208ENST00000560353 CHRDQ9H2X0 955 aa11.64□□□□□ -0.55
APH1B-208ENST00000560353 LHX6Q9UPM6 363 aa11.64□□□□□ -0.55
APH1B-208ENST00000560353 MAFBQ9Y5Q3 323 aaPredicted RBP11.64□□□□□ -0.55
APH1B-208ENST00000560353 SRRM3A6NNA2 597 aaPredicted RBP11.63□□□□□ -0.55
APH1B-208ENST00000560353 DDX39AO00148 427 aaKnown RBP11.63□□□□□ -0.55
APH1B-208ENST00000560353 NRP1O14786 923 aa11.63□□□□□ -0.55
APH1B-208ENST00000560353 TGM5O43548 720 aa11.63□□□□□ -0.55
APH1B-208ENST00000560353 B4GALT3O60512 393 aa11.63□□□□□ -0.55
APH1B-208ENST00000560353 ZMYND10O75800 440 aa11.63□□□□□ -0.55
APH1B-208ENST00000560353 DDHD2O94830 711 aa11.63□□□□□ -0.55
APH1B-208ENST00000560353 KCNK5O95279 499 aa11.63□□□□□ -0.55
APH1B-208ENST00000560353 SDSP20132 328 aa11.63□□□□□ -0.55
APH1B-208ENST00000560353 CCR3P51677 355 aa11.63□□□□□ -0.55
APH1B-208ENST00000560353 SART3Q15020 963 aaKnown RBP11.63□□□□□ -0.55
APH1B-208ENST00000560353 TAS1R1Q7RTX1 841 aa11.63□□□□□ -0.55
APH1B-208ENST00000560353 TRMT1LQ7Z2T5 733 aaKnown RBP11.63□□□□□ -0.55
APH1B-208ENST00000560353 GRASPQ7Z6J2 395 aaPredicted RBP11.63□□□□□ -0.55
APH1B-208ENST00000560353 LRRC71Q8N4P6 559 aa11.63□□□□□ -0.55
APH1B-208ENST00000560353 C12orf50Q8NA57 414 aaPredicted RBP11.63□□□□□ -0.55
APH1B-208ENST00000560353 ZNF668Q96K58 619 aaPredicted RBP11.63□□□□□ -0.55
APH1B-208ENST00000560353 MAP3K14Q99558 947 aa11.63□□□□□ -0.55
APH1B-208ENST00000560353 KXD1Q9BQD3 176 aa11.63□□□□□ -0.55
APH1B-208ENST00000560353 GCOM2Q9BZD3 368 aaPredicted RBP11.63□□□□□ -0.55
APH1B-208ENST00000560353 LY9Q9HBG7 655 aa11.63□□□□□ -0.55
APH1B-208ENST00000560353 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.63□□□□□ -0.55
APH1B-208ENST00000560353 FAM105AQ9NUU6 356 aa11.63□□□□□ -0.55
APH1B-208ENST00000560353 COL4A3Q01955 1670 aa11.62□□□□□ -0.55
APH1B-208ENST00000560353 MAST4O15021 2626 aa11.62□□□□□ -0.55
APH1B-208ENST00000560353 EVPLQ92817 2033 aa11.62□□□□□ -0.55
APH1B-208ENST00000560353 MEIS3P2A8K0S8 358 aa11.62□□□□□ -0.55
APH1B-208ENST00000560353 MAN2B1O00754 1011 aa11.62□□□□□ -0.55
APH1B-208ENST00000560353 HRO43593 1189 aa11.62□□□□□ -0.55
APH1B-208ENST00000560353 CSDE1O75534 798 aaKnown RBP11.62□□□□□ -0.55
APH1B-208ENST00000560353 SFPQP23246 707 aaKnown RBP eCLIP11.62□□□□□ -0.55
APH1B-208ENST00000560353 DSG1Q02413 1049 aa11.62□□□□□ -0.55
APH1B-208ENST00000560353 RING1Q06587 406 aa11.62□□□□□ -0.55
APH1B-208ENST00000560353 C20orf194Q5TEA3 1177 aa11.62□□□□□ -0.55
APH1B-208ENST00000560353 STPG1Q5TH74 334 aa11.62□□□□□ -0.55
APH1B-208ENST00000560353 LILRA6Q6PI73 481 aa11.62□□□□□ -0.55
APH1B-208ENST00000560353 TEX2Q8IWB9 1127 aa11.62□□□□□ -0.55
APH1B-208ENST00000560353 CTCFLQ8NI51 663 aaPredicted RBP11.62□□□□□ -0.55
APH1B-208ENST00000560353 RILPL2Q969X0 211 aa11.62□□□□□ -0.55
APH1B-208ENST00000560353 FAM167AQ96KS9 214 aa11.62□□□□□ -0.55
APH1B-208ENST00000560353 LSM14BQ9BX40 385 aaKnown RBP11.62□□□□□ -0.55
APH1B-208ENST00000560353 SENP2Q9HC62 589 aa11.62□□□□□ -0.55
APH1B-208ENST00000560353 PIN4Q9Y237 131 aaKnown RBP11.62□□□□□ -0.55
APH1B-208ENST00000560353 AKAP13Q12802 2813 aa11.62□□□□□ -0.55
APH1B-208ENST00000560353 EFEMP2O95967 443 aa11.61□□□□□ -0.55
APH1B-208ENST00000560353 PSAPP07602 524 aa11.61□□□□□ -0.55
APH1B-208ENST00000560353 HNRNPA1P09651 372 aaKnown RBP eCLIP11.61□□□□□ -0.55
APH1B-208ENST00000560353 CXCL12P48061 93 aa11.61□□□□□ -0.55
APH1B-208ENST00000560353 GNAQP50148 359 aa11.61□□□□□ -0.55
APH1B-208ENST00000560353 CREMQ03060 361 aa11.61□□□□□ -0.55
APH1B-208ENST00000560353 ANKRD45Q5TZF3 282 aa11.61□□□□□ -0.55
APH1B-208ENST00000560353 CWC27Q6UX04 472 aaKnown RBP11.61□□□□□ -0.55
APH1B-208ENST00000560353 NIPA1Q7RTP0 329 aa11.61□□□□□ -0.55
APH1B-208ENST00000560353 GPR65Q8IYL9 337 aa11.61□□□□□ -0.55
APH1B-208ENST00000560353 RNF168Q8IYW5 571 aaPredicted RBP11.61□□□□□ -0.55
APH1B-208ENST00000560353 ZNF687Q8N1G0 1237 aa11.61□□□□□ -0.55
APH1B-208ENST00000560353 OXER1Q8TDS5 423 aa11.61□□□□□ -0.55
APH1B-208ENST00000560353 INO80BQ9C086 356 aaPredicted RBP11.61□□□□□ -0.55
APH1B-208ENST00000560353 HEBP1Q9NRV9 189 aa11.61□□□□□ -0.55
APH1B-208ENST00000560353 CHST7Q9NS84 486 aa11.61□□□□□ -0.55
APH1B-208ENST00000560353 FNIP2Q9P278 1114 aa11.61□□□□□ -0.55
APH1B-208ENST00000560353 PCDHB2Q9Y5E7 798 aa11.61□□□□□ -0.55
APH1B-208ENST00000560353 CNTNAP2Q9UHC6 1331 aa11.6□□□□□ -0.55
APH1B-208ENST00000560353 BPTFQ12830 3046 aa11.6□□□□□ -0.55
APH1B-208ENST00000560353 LAMA1P25391 3075 aa11.6□□□□□ -0.55
APH1B-208ENST00000560353 CHURC1-FNTBB4DL54 471 aa11.6□□□□□ -0.55
APH1B-208ENST00000560353 DHX15O43143 795 aaKnown RBP11.6□□□□□ -0.55
APH1B-208ENST00000560353 NR1I2O75469 434 aa11.6□□□□□ -0.55
APH1B-208ENST00000560353 ECI2O75521 394 aa11.6□□□□□ -0.55
APH1B-208ENST00000560353 FOSP01100 380 aaPredicted RBP11.6□□□□□ -0.55
APH1B-208ENST00000560353 ZNF806P0C7X5 589 aa11.6□□□□□ -0.55
APH1B-208ENST00000560353 ZNF76P36508 570 aa11.6□□□□□ -0.55
APH1B-208ENST00000560353 FNTBP49356 437 aa11.6□□□□□ -0.55
APH1B-208ENST00000560353 SF3A2Q15428 464 aaKnown RBP11.6□□□□□ -0.55
APH1B-208ENST00000560353 PSAPL1Q6NUJ1 521 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms