RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 P2RX5Q93086 422 aa20.5■□□□□ 0.87
SEMA4B-215ENST00000560089 GRAMD1AQ96CP6 724 aa20.5■□□□□ 0.87
SEMA4B-215ENST00000560089 STK32BQ9NY57 414 aa20.5■□□□□ 0.87
SEMA4B-215ENST00000560089 DDX25Q9UHL0 483 aaKnown RBP20.5■□□□□ 0.87
SEMA4B-215ENST00000560089 BICDL2A1A5D9 508 aa20.5■□□□□ 0.87
SEMA4B-215ENST00000560089 IDH1O75874 414 aaKnown RBP20.5■□□□□ 0.87
SEMA4B-215ENST00000560089 CBX6O95503 412 aa20.5■□□□□ 0.87
SEMA4B-215ENST00000560089 CA8P35219 290 aa20.5■□□□□ 0.87
SEMA4B-215ENST00000560089 ANKRD40Q6AI12 368 aa20.5■□□□□ 0.87
SEMA4B-215ENST00000560089 IRGQQ8WZA9 623 aa20.5■□□□□ 0.87
SEMA4B-215ENST00000560089 PACSIN1Q9BY11 444 aa20.5■□□□□ 0.87
SEMA4B-215ENST00000560089 ZDHHC18Q9NUE0 388 aa20.5■□□□□ 0.87
SEMA4B-215ENST00000560089 CLIC5Q9NZA1 410 aa20.5■□□□□ 0.87
SEMA4B-215ENST00000560089 CNOT7Q9UIV1 285 aaKnown RBP20.5■□□□□ 0.87
SEMA4B-215ENST00000560089 HTR3EA5X5Y0 456 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 P4HA2O15460 535 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 ATP9BO43861 1147 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 T-ENOLP0DO92 83 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 STX2P32856 288 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 RASGRF1Q13972 1273 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 CYLC2Q14093 348 aaPredicted RBP20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 TNFAIP8L3Q5GJ75 292 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 PUS7LQ9H0K6 701 aaKnown RBP20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 PIH1D3Q9NQM4 214 aaKnown RBP20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 KRT82Q9NSB4 513 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 BTBD7Q9P203 1132 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 RTL9Q8NET4 1388 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 LRP5O75197 1615 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 PSMG1O95456 288 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 SMARCA1P28370 1054 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 RTN1Q16799 776 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 VWA3BQ502W6 1294 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 UBAP2Q5T6F2 1119 aaKnown RBP20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 DSTYKQ6XUX3 929 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 STMN2Q93045 179 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 GPR101Q96P66 508 aaPredicted RBP20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 PITPNM3Q9BZ71 974 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 SEMA4AQ9H3S1 761 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 METTL14Q9HCE5 456 aaKnown RBP20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 MAPK13O15264 365 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 OPHN1O60890 802 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 CREB1P16220 341 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 CCNE1P24864 410 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 COL24A1Q17RW2 1714 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 ACSBG2Q5FVE4 666 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 RBM26Q5T8P6 1007 aaKnown RBP20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 CCDC174Q6PII3 467 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 CCDC84Q86UT8 332 aaPredicted RBP20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 TRIM50Q86XT4 487 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 GIMAP8Q8ND71 665 aaPredicted RBP20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 NLRC4Q9NPP4 1024 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 PTTG2Q9NZH5 202 aa20.49■□□□□ 0.87
SEMA4B-215ENST00000560089 GPAA1O43292 621 aa20.48■□□□□ 0.87
SEMA4B-215ENST00000560089 GH1P01241 217 aa20.48■□□□□ 0.87
SEMA4B-215ENST00000560089 PTPN4P29074 926 aa20.48■□□□□ 0.87
SEMA4B-215ENST00000560089 YARSP54577 528 aaKnown RBP20.48■□□□□ 0.87
SEMA4B-215ENST00000560089 RBM46Q8TBY0 533 aaKnown RBP20.48■□□□□ 0.87
SEMA4B-215ENST00000560089 TMEM109Q9BVC6 243 aa20.48■□□□□ 0.87
SEMA4B-215ENST00000560089 PDGFDQ9GZP0 370 aaPredicted RBP20.48■□□□□ 0.87
SEMA4B-215ENST00000560089 NT5C3AQ9H0P0 336 aa20.48■□□□□ 0.87
SEMA4B-215ENST00000560089 ZNF148Q9UQR1 794 aa20.48■□□□□ 0.87
SEMA4B-215ENST00000560089 JAG2Q9Y219 1238 aa20.48■□□□□ 0.87
SEMA4B-215ENST00000560089 MYH4Q9Y623 1939 aa20.48■□□□□ 0.87
SEMA4B-215ENST00000560089 POLRMTO00411 1230 aaKnown RBP20.48■□□□□ 0.87
SEMA4B-215ENST00000560089 HDAC4P56524 1084 aa20.48■□□□□ 0.87
SEMA4B-215ENST00000560089 KLRC3Q07444 240 aa20.48■□□□□ 0.87
SEMA4B-215ENST00000560089 TTC38Q5R3I4 469 aa20.48■□□□□ 0.87
SEMA4B-215ENST00000560089 VSTM1Q6UX27 236 aa20.48■□□□□ 0.87
SEMA4B-215ENST00000560089 TCHPQ9BT92 498 aa20.48■□□□□ 0.87
SEMA4B-215ENST00000560089 ZNF212Q9UDV6 495 aa20.48■□□□□ 0.87
SEMA4B-215ENST00000560089 TDRKHQ9Y2W6 561 aaKnown RBP20.48■□□□□ 0.87
SEMA4B-215ENST00000560089 FAM196BA6NMK8 535 aa20.47■□□□□ 0.87
SEMA4B-215ENST00000560089 KRT2P35908 639 aa20.47■□□□□ 0.87
SEMA4B-215ENST00000560089 RGS2P41220 211 aa20.47■□□□□ 0.87
SEMA4B-215ENST00000560089 ATP2C1P98194 919 aaPredicted RBP20.47■□□□□ 0.87
SEMA4B-215ENST00000560089 CDR2Q01850 454 aa20.47■□□□□ 0.87
SEMA4B-215ENST00000560089 ERMNQ8TAM6 284 aa20.47■□□□□ 0.87
SEMA4B-215ENST00000560089 STX18Q9P2W9 335 aaKnown RBP20.47■□□□□ 0.87
SEMA4B-215ENST00000560089 UMODL1Q5DID0 1318 aa20.47■□□□□ 0.87
SEMA4B-215ENST00000560089 RPTORQ8N122 1335 aa20.47■□□□□ 0.87
SEMA4B-215ENST00000560089 TRAFD1O14545 582 aaPredicted RBP20.47■□□□□ 0.87
SEMA4B-215ENST00000560089 RGL2O15211 777 aa20.47■□□□□ 0.87
SEMA4B-215ENST00000560089 NELFCDQ8IXH7 590 aa20.47■□□□□ 0.87
SEMA4B-215ENST00000560089 CRACR2BQ8N4Y2 399 aaPredicted RBP20.47■□□□□ 0.87
SEMA4B-215ENST00000560089 ESR2Q92731 530 aa20.47■□□□□ 0.87
SEMA4B-215ENST00000560089 TRPV5Q9NQA5 729 aa20.47■□□□□ 0.87
SEMA4B-215ENST00000560089 DCTN3O75935 186 aa20.46■□□□□ 0.87
SEMA4B-215ENST00000560089 SERPING1P05155 500 aa20.46■□□□□ 0.87
SEMA4B-215ENST00000560089 ZFYP08048 801 aaPredicted RBP20.46■□□□□ 0.87
SEMA4B-215ENST00000560089 PORP16435 677 aaPredicted RBP20.46■□□□□ 0.87
SEMA4B-215ENST00000560089 FGFR4P22455 802 aa20.46■□□□□ 0.87
SEMA4B-215ENST00000560089 SAPCD2Q86UD0 394 aa20.46■□□□□ 0.87
SEMA4B-215ENST00000560089 FBXO25Q8TCJ0 367 aa20.46■□□□□ 0.87
SEMA4B-215ENST00000560089 TLE6Q9H808 572 aa20.46■□□□□ 0.87
SEMA4B-215ENST00000560089 SMIM31A0A1B0GVY4 71 aa20.46■□□□□ 0.87
SEMA4B-215ENST00000560089 PKN1Q16512 942 aa20.46■□□□□ 0.87
SEMA4B-215ENST00000560089 SATL1Q86VE3 508 aa20.46■□□□□ 0.87
SEMA4B-215ENST00000560089 DEPTORQ8TB45 409 aa20.46■□□□□ 0.87
SEMA4B-215ENST00000560089 APPBP2Q92624 585 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms