RNA–Protein interactions for RNA: ENST00000559866.1

AC243562.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC243562.3, Length 1,212 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC243562.3-201ENST00000559866 TDP2O95551 362 aa17.5■□□□□ 0.39
AC243562.3-201ENST00000559866 RPL17P18621 184 aaKnown RBP17.5■□□□□ 0.39
AC243562.3-201ENST00000559866 BMP2KLQ5H9B9 411 aa17.5■□□□□ 0.39
AC243562.3-201ENST00000559866 ZC3H14Q6PJT7 736 aaKnown RBP17.5■□□□□ 0.39
AC243562.3-201ENST00000559866 MIER3Q7Z3K6 550 aa17.5■□□□□ 0.39
AC243562.3-201ENST00000559866 PALB2Q86YC2 1186 aa17.5■□□□□ 0.39
AC243562.3-201ENST00000559866 STAMQ92783 540 aa17.5■□□□□ 0.39
AC243562.3-201ENST00000559866 NT5C3AQ9H0P0 336 aa17.5■□□□□ 0.39
AC243562.3-201ENST00000559866 NOTCH4Q99466 2003 aa17.5■□□□□ 0.39
AC243562.3-201ENST00000559866 TGM5O43548 720 aa17.49■□□□□ 0.39
AC243562.3-201ENST00000559866 GNA11P29992 359 aa17.49■□□□□ 0.39
AC243562.3-201ENST00000559866 OR1G1P47890 313 aa17.49■□□□□ 0.39
AC243562.3-201ENST00000559866 NPEPPSP55786 919 aa17.49■□□□□ 0.39
AC243562.3-201ENST00000559866 GPC5P78333 572 aa17.49■□□□□ 0.39
AC243562.3-201ENST00000559866 DSC1Q08554 894 aa17.49■□□□□ 0.39
AC243562.3-201ENST00000559866 NONOQ15233 471 aaKnown RBP eCLIP17.49■□□□□ 0.39
AC243562.3-201ENST00000559866 PARM1Q6UWI2 310 aa17.49■□□□□ 0.39
AC243562.3-201ENST00000559866 ZFP42Q96MM3 310 aa17.49■□□□□ 0.39
AC243562.3-201ENST00000559866 FAM193BQ96PV7 902 aaPredicted RBP17.49■□□□□ 0.39
AC243562.3-201ENST00000559866 EIF2AQ9BY44 585 aaKnown RBP17.49■□□□□ 0.39
AC243562.3-201ENST00000559866 INO80BQ9C086 356 aaPredicted RBP17.49■□□□□ 0.39
AC243562.3-201ENST00000559866 BMP2KQ9NSY1 1161 aaPredicted RBP17.49■□□□□ 0.39
AC243562.3-201ENST00000559866 VPS54Q9P1Q0 977 aa17.49■□□□□ 0.39
AC243562.3-201ENST00000559866 WRAP73Q9P2S5 460 aaPredicted RBP17.49■□□□□ 0.39
AC243562.3-201ENST00000559866 CACNG4Q9UBN1 327 aa17.49■□□□□ 0.39
AC243562.3-201ENST00000559866 HES2Q9Y543 173 aa17.49■□□□□ 0.39
AC243562.3-201ENST00000559866 NID2Q14112 1375 aa17.49■□□□□ 0.39
AC243562.3-201ENST00000559866 COL4A2P08572 1712 aa17.49■□□□□ 0.39
AC243562.3-201ENST00000559866 VWA8A3KMH1 1905 aa17.49■□□□□ 0.39
AC243562.3-201ENST00000559866 CNTNAP2Q9UHC6 1331 aa17.48■□□□□ 0.39
AC243562.3-201ENST00000559866 DDX11L8A8MPP1 907 aa17.48■□□□□ 0.39
AC243562.3-201ENST00000559866 NCLP19338 710 aaKnown RBP17.48■□□□□ 0.39
AC243562.3-201ENST00000559866 MLH1P40692 756 aa17.48■□□□□ 0.39
AC243562.3-201ENST00000559866 DNM2P50570 870 aa17.48■□□□□ 0.39
AC243562.3-201ENST00000559866 STARD6P59095 220 aa17.48■□□□□ 0.39
AC243562.3-201ENST00000559866 NTHL1P78549 312 aa17.48■□□□□ 0.39
AC243562.3-201ENST00000559866 AKAP17AQ02040 695 aaKnown RBP17.48■□□□□ 0.39
AC243562.3-201ENST00000559866 DSG1Q02413 1049 aa17.48■□□□□ 0.39
AC243562.3-201ENST00000559866 TSGA10IPQ3SY00 556 aa17.48■□□□□ 0.39
AC243562.3-201ENST00000559866 LILRA6Q6PI73 481 aa17.48■□□□□ 0.39
AC243562.3-201ENST00000559866 CYP26C1Q6V0L0 522 aa17.48■□□□□ 0.39
AC243562.3-201ENST00000559866 RABGGTAQ92696 567 aa17.48■□□□□ 0.39
AC243562.3-201ENST00000559866 NXPE3Q969Y0 559 aa17.48■□□□□ 0.39
AC243562.3-201ENST00000559866 GAD1Q99259 594 aa17.48■□□□□ 0.39
AC243562.3-201ENST00000559866 GPR62Q9BZJ7 368 aa17.48■□□□□ 0.39
AC243562.3-201ENST00000559866 CHST7Q9NS84 486 aa17.48■□□□□ 0.39
AC243562.3-201ENST00000559866 STK39Q9UEW8 545 aa17.48■□□□□ 0.39
AC243562.3-201ENST00000559866 COL4A3BPQ9Y5P4 624 aa17.48■□□□□ 0.39
AC243562.3-201ENST00000559866 EML1O00423 815 aa17.47■□□□□ 0.39
AC243562.3-201ENST00000559866 PRPF3O43395 683 aaKnown RBP17.47■□□□□ 0.39
AC243562.3-201ENST00000559866 SCNN1GP51170 649 aa17.47■□□□□ 0.39
AC243562.3-201ENST00000559866 CDC42EP1Q00587 391 aa17.47■□□□□ 0.39
AC243562.3-201ENST00000559866 SNW1Q13573 536 aaKnown RBP17.47■□□□□ 0.39
AC243562.3-201ENST00000559866 ETNPPLQ8TBG4 499 aa17.47■□□□□ 0.39
AC243562.3-201ENST00000559866 BICD2Q8TD16 824 aa17.47■□□□□ 0.39
AC243562.3-201ENST00000559866 TMEM143Q96AN5 459 aa17.47■□□□□ 0.39
AC243562.3-201ENST00000559866 PRKD2Q9BZL6 878 aa17.47■□□□□ 0.39
AC243562.3-201ENST00000559866 PIDD1Q9HB75 910 aa17.47■□□□□ 0.39
AC243562.3-201ENST00000559866 IPPQ9Y573 584 aa17.47■□□□□ 0.39
AC243562.3-201ENST00000559866 EPG5Q9HCE0 2579 aa17.46■□□□□ 0.39
AC243562.3-201ENST00000559866 CACNA1BQ00975 2339 aa17.46■□□□□ 0.39
AC243562.3-201ENST00000559866 ARL5CA6NH57 179 aa17.46■□□□□ 0.39
AC243562.3-201ENST00000559866 KINO60870 393 aaKnown RBP17.46■□□□□ 0.39
AC243562.3-201ENST00000559866 CDC45O75419 566 aa17.46■□□□□ 0.39
AC243562.3-201ENST00000559866 SRGAP2CP0DJJ0 459 aa17.46■□□□□ 0.39
AC243562.3-201ENST00000559866 CD72P21854 359 aa17.46■□□□□ 0.39
AC243562.3-201ENST00000559866 ATXN1P54253 815 aaKnown RBP17.46■□□□□ 0.39
AC243562.3-201ENST00000559866 NTRK3Q16288 839 aa17.46■□□□□ 0.39
AC243562.3-201ENST00000559866 Q4G0T1 1027 aa17.46■□□□□ 0.39
AC243562.3-201ENST00000559866 SKAP1Q86WV1 359 aa17.46■□□□□ 0.39
AC243562.3-201ENST00000559866 CCDC148Q8NFR7 591 aa17.46■□□□□ 0.39
AC243562.3-201ENST00000559866 RDM1Q8NG50 284 aa17.46■□□□□ 0.39
AC243562.3-201ENST00000559866 TBCKQ8TEA7 893 aa17.46■□□□□ 0.39
AC243562.3-201ENST00000559866 PRPF31Q8WWY3 499 aaKnown RBP17.46■□□□□ 0.39
AC243562.3-201ENST00000559866 DDX23Q9BUQ8 820 aaKnown RBP17.46■□□□□ 0.39
AC243562.3-201ENST00000559866 ZDHHC7Q9NXF8 308 aa17.46■□□□□ 0.39
AC243562.3-201ENST00000559866 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.46■□□□□ 0.39
AC243562.3-201ENST00000559866 KANSL3Q9P2N6 904 aa17.46■□□□□ 0.39
AC243562.3-201ENST00000559866 GPR179Q6PRD1 2367 aa17.46■□□□□ 0.39
AC243562.3-201ENST00000559866 GAS2O43903 313 aaKnown RBP17.45■□□□□ 0.38
AC243562.3-201ENST00000559866 USP11P51784 963 aa17.45■□□□□ 0.38
AC243562.3-201ENST00000559866 VARS2Q5ST30 1063 aaKnown RBP17.45■□□□□ 0.38
AC243562.3-201ENST00000559866 TSSK4Q6SA08 328 aa17.45■□□□□ 0.38
AC243562.3-201ENST00000559866 PRSS55Q6UWB4 352 aaPredicted RBP17.45■□□□□ 0.38
AC243562.3-201ENST00000559866 GRASPQ7Z6J2 395 aaPredicted RBP17.45■□□□□ 0.38
AC243562.3-201ENST00000559866 GSTCDQ8NEC7 633 aa17.45■□□□□ 0.38
AC243562.3-201ENST00000559866 HDAC7Q8WUI4 952 aa17.45■□□□□ 0.38
AC243562.3-201ENST00000559866 CPB2Q96IY4 423 aa17.45■□□□□ 0.38
AC243562.3-201ENST00000559866 SPATA6Q9NWH7 488 aaPredicted RBP17.45■□□□□ 0.38
AC243562.3-201ENST00000559866 NCDNQ9UBB6 729 aa17.45■□□□□ 0.38
AC243562.3-201ENST00000559866 SSX2IPQ9Y2D8 614 aa17.45■□□□□ 0.38
AC243562.3-201ENST00000559866 KANSL1LA0AUZ9 987 aa17.44■□□□□ 0.38
AC243562.3-201ENST00000559866 TSPAN1O60635 241 aa17.44■□□□□ 0.38
AC243562.3-201ENST00000559866 ZMYND10O75800 440 aa17.44■□□□□ 0.38
AC243562.3-201ENST00000559866 ITGA4P13612 1032 aa17.44■□□□□ 0.38
AC243562.3-201ENST00000559866 TGM1P22735 817 aa17.44■□□□□ 0.38
AC243562.3-201ENST00000559866 FSHRP23945 695 aa17.44■□□□□ 0.38
AC243562.3-201ENST00000559866 LAMTOR4Q0VGL1 99 aa17.44■□□□□ 0.38
AC243562.3-201ENST00000559866 ZNF528Q3MIS6 628 aa17.44■□□□□ 0.38
AC243562.3-201ENST00000559866 RTP2Q5QGT7 225 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms