RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 PER2O15055 1255 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 ZNF862O60290 1169 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 HBP1O60381 514 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 FGFR1P11362 822 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 FGFR3P22607 806 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 NRIP1P48552 1158 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 SLC26A2P50443 739 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 RCAN1P53805 252 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 RAB15P59190 212 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 NHLH1Q02575 133 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 CBX2Q14781 532 aaPredicted RBP6.58□□□□□ -1.36
USP3-215ENST00000559771 NTRK3Q16288 839 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 KIZQ2M2Z5 673 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 ZNF484Q5JVG2 852 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 SLC24A5Q71RS6 500 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 RBM23Q86U06 439 aaKnown RBP6.58□□□□□ -1.36
USP3-215ENST00000559771 PLA2G4DQ86XP0 818 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 ZNF713Q8N859 430 aaPredicted RBP6.58□□□□□ -1.36
USP3-215ENST00000559771 KRI1Q8N9T8 703 aaKnown RBP6.58□□□□□ -1.36
USP3-215ENST00000559771 RASGRP4Q8TDF6 673 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 SUSD6Q92537 303 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 CEP89Q96ST8 783 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 PPP1R16BQ96T49 567 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 OSMRQ99650 979 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 ADAM2Q99965 735 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 ZMYND12Q9H0C1 365 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 ADAMTS10Q9H324 1103 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 ZNF302Q9NR11 478 aa6.58□□□□□ -1.36
USP3-215ENST00000559771 TYW1Q9NV66 732 aaKnown RBP6.58□□□□□ -1.36
USP3-215ENST00000559771 TBKBP1A7MCY6 615 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 FAM229AH3BQW9 127 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 M0QZ92 97 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 BACH1O14867 736 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 PRPF3O43395 683 aaKnown RBP6.57□□□□□ -1.36
USP3-215ENST00000559771 RPS6KA5O75582 802 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 FGF18O76093 207 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 STBD1O95210 358 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 VTNP04004 478 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 STAG3L1P0CL83 205 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 ATF7P17544 494 aaPredicted RBP6.57□□□□□ -1.36
USP3-215ENST00000559771 CIITAP33076 1130 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 NDUFV1P49821 464 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 CLCN3P51790 818 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 CRYBB1P53674 252 aaPredicted RBP6.57□□□□□ -1.36
USP3-215ENST00000559771 APOBRQ0VD83 1088 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 UGCGQ16739 394 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 DUSP6Q16828 381 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 ZNF746Q6NUN9 644 aaPredicted RBP6.57□□□□□ -1.36
USP3-215ENST00000559771 SYCE2Q6PIF2 218 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 TMEM184AQ6ZMB5 413 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 FBXL16Q8N461 479 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 COLGALT1Q8NBJ5 622 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 PRSS33Q8NF86 280 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 FEZF2Q8TBJ5 459 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 EDAQ92838 391 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 GJA10Q969M2 543 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 CASD1Q96PB1 797 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 ZNF577Q9BSK1 485 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 AGXT2Q9BYV1 514 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 S1PR5Q9H228 398 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 GPAMQ9HCL2 828 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 CYLDQ9NQC7 956 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 C1orf112Q9NSG2 853 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 TMEM161AQ9NX61 479 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 CDH22Q9UJ99 828 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 RNF112Q9ULX5 631 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 FAM50BQ9Y247 325 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 GINS2Q9Y248 185 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 USP15Q9Y4E8 981 aaPredicted RBP6.57□□□□□ -1.36
USP3-215ENST00000559771 RNF114Q9Y508 228 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 PCDHB7Q9Y5E2 793 aa6.57□□□□□ -1.36
USP3-215ENST00000559771 HIDE1A8MVS5 230 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 ESPNB1AK53 854 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 M0R2N6 131 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 MSH4O15457 936 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 IBSPP21815 317 aaPredicted RBP6.56□□□□□ -1.36
USP3-215ENST00000559771 HSPA4P34932 840 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 ZNF76P36508 570 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 PBX3P40426 434 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 MRE11P49959 708 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 METAP2P50579 478 aaKnown RBP eCLIP6.56□□□□□ -1.36
USP3-215ENST00000559771 EVCP57679 992 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 NLRP11P59045 1033 aaKnown RBP6.56□□□□□ -1.36
USP3-215ENST00000559771 ZXDAP98168 799 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 PLCB3Q01970 1234 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 UBE3AQ05086 875 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 DRP2Q13474 957 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 TARBP2Q15633 366 aaKnown RBP6.56□□□□□ -1.36
USP3-215ENST00000559771 NPY5RQ15761 445 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 CSPP1Q1MSJ5 1256 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 PRR16Q569H4 304 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 CLLU1OSQ5K130 101 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 RNF20Q5VTR2 975 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 FAM160B1Q5W0V3 765 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 MIS18BP1Q6P0N0 1132 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 B3GNT9Q6UX72 402 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 SYNE3Q6ZMZ3 975 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 Q6ZUG5 572 aa6.56□□□□□ -1.36
USP3-215ENST00000559771 TRMT1LQ7Z2T5 733 aaKnown RBP6.56□□□□□ -1.36
USP3-215ENST00000559771 BMP8AQ7Z5Y6 402 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms