RNA–Protein interactions for RNA: ENST00000559598.6

CRNDE-207, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 1 (best)

Gene CRNDE, Length 696 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-207ENST00000559598 EDC3Q96F86 508 aaKnown RBP7.27□□□□□ -1.25
CRNDE-207ENST00000559598 RNPC3Q96LT9 517 aaKnown RBP7.27□□□□□ -1.25
CRNDE-207ENST00000559598 PTCHD1Q96NR3 888 aa7.27□□□□□ -1.25
CRNDE-207ENST00000559598 ASB2Q96Q27 587 aa7.27□□□□□ -1.25
CRNDE-207ENST00000559598 UHRF1Q96T88 793 aaPredicted RBP7.27□□□□□ -1.25
CRNDE-207ENST00000559598 PLCD4Q9BRC7 762 aa7.27□□□□□ -1.25
CRNDE-207ENST00000559598 SLC6A17Q9H1V8 727 aa7.27□□□□□ -1.25
CRNDE-207ENST00000559598 DDX4Q9NQI0 724 aaKnown RBP7.27□□□□□ -1.25
CRNDE-207ENST00000559598 PDLIM7Q9NR12 457 aa7.27□□□□□ -1.25
CRNDE-207ENST00000559598 ST7Q9NRC1 585 aa7.27□□□□□ -1.25
CRNDE-207ENST00000559598 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.27□□□□□ -1.25
CRNDE-207ENST00000559598 PLXNA1Q9UIW2 1896 aa7.27□□□□□ -1.25
CRNDE-207ENST00000559598 MUC6Q6W4X9 2439 aa7.27□□□□□ -1.25
CRNDE-207ENST00000559598 GPR75-ASB3A0A0A6YYF3 556 aa7.26□□□□□ -1.25
CRNDE-207ENST00000559598 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.26□□□□□ -1.25
CRNDE-207ENST00000559598 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.26□□□□□ -1.25
CRNDE-207ENST00000559598 NOP56O00567 594 aaKnown RBP7.26□□□□□ -1.25
CRNDE-207ENST00000559598 CIAO1O76071 339 aa7.26□□□□□ -1.25
CRNDE-207ENST00000559598 GALK1P51570 392 aa7.26□□□□□ -1.25
CRNDE-207ENST00000559598 RAB33AQ14088 237 aa7.26□□□□□ -1.25
CRNDE-207ENST00000559598 EEF1DP3Q658K8 133 aa7.26□□□□□ -1.25
CRNDE-207ENST00000559598 GALNT18Q6P9A2 607 aa7.26□□□□□ -1.25
CRNDE-207ENST00000559598 CCDC174Q6PII3 467 aa7.26□□□□□ -1.25
CRNDE-207ENST00000559598 PRR23BQ6ZRT6 265 aa7.26□□□□□ -1.25
CRNDE-207ENST00000559598 EEPD1Q7L9B9 569 aa7.26□□□□□ -1.25
CRNDE-207ENST00000559598 SIRT2Q8IXJ6 389 aa7.26□□□□□ -1.25
CRNDE-207ENST00000559598 USP38Q8NB14 1042 aa7.26□□□□□ -1.25
CRNDE-207ENST00000559598 UBE2Q2Q8WVN8 375 aa7.26□□□□□ -1.25
CRNDE-207ENST00000559598 INTS4Q96HW7 963 aaKnown RBP7.26□□□□□ -1.25
CRNDE-207ENST00000559598 P2RX7Q99572 595 aaKnown RBP7.26□□□□□ -1.25
CRNDE-207ENST00000559598 PORCNQ9H237 461 aa7.26□□□□□ -1.25
CRNDE-207ENST00000559598 DHX36Q9H2U1 1008 aaKnown RBP7.26□□□□□ -1.25
CRNDE-207ENST00000559598 TXNRD2Q9NNW7 524 aa7.26□□□□□ -1.25
CRNDE-207ENST00000559598 RBPJLQ9UBG7 517 aa7.26□□□□□ -1.25
CRNDE-207ENST00000559598 RABGAP1Q9Y3P9 1069 aa7.26□□□□□ -1.25
CRNDE-207ENST00000559598 TAF6LQ9Y6J9 622 aa7.26□□□□□ -1.25
CRNDE-207ENST00000559598 TCF20Q9UGU0 1960 aaKnown RBP7.26□□□□□ -1.25
CRNDE-207ENST00000559598 KCNH1O95259 989 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 LDHCP07864 332 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 CLTBP09497 229 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 CYBAP13498 195 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 CNGA1P29973 690 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 GSTO1P78417 241 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 GRB14Q14449 540 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 TRIM60Q495X7 471 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 SV2CQ496J9 727 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 HLA-DQA1Q5Y7H0 255 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 LBX2Q6XYB7 198 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 WDR63Q8IWG1 891 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 TRIM59Q8IWR1 403 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 CKAP2LQ8IYA6 745 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 TIFAQ96CG3 184 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 MRGPRX3Q96LB0 322 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 JMJD8Q96S16 334 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 PAGR1Q9BTK6 254 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 LGR4Q9BXB1 951 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 NSUN3Q9H649 340 aaKnown RBP7.25□□□□□ -1.25
CRNDE-207ENST00000559598 PRKRIP1Q9H875 184 aaPredicted RBP7.25□□□□□ -1.25
CRNDE-207ENST00000559598 CRTAC1Q9NQ79 661 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 PI4KBQ9UBF8 816 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 RAPGEFL1Q9UHV5 662 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 BACE2Q9Y5Z0 518 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 SMCHD1A6NHR9 2005 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 MYH1P12882 1939 aa7.25□□□□□ -1.25
CRNDE-207ENST00000559598 ZNFX1Q9P2E3 1918 aaKnown RBP7.25□□□□□ -1.25
CRNDE-207ENST00000559598 A0A0G2JMZ2 1700 aa7.24□□□□□ -1.25
CRNDE-207ENST00000559598 GBF1Q92538 1859 aa7.24□□□□□ -1.25
CRNDE-207ENST00000559598 ROBO3Q96MS0 1386 aa7.24□□□□□ -1.25
CRNDE-207ENST00000559598 C2orf71A6NGG8 1288 aa7.24□□□□□ -1.25
CRNDE-207ENST00000559598 SEPT4O43236 478 aa7.24□□□□□ -1.25
CRNDE-207ENST00000559598 RHBDL3P58872 404 aa7.24□□□□□ -1.25
CRNDE-207ENST00000559598 FPGSQ05932 587 aa7.24□□□□□ -1.25
CRNDE-207ENST00000559598 EXOSC9Q06265 439 aaKnown RBP7.24□□□□□ -1.25
CRNDE-207ENST00000559598 AAK1Q2M2I8 961 aa7.24□□□□□ -1.25
CRNDE-207ENST00000559598 KRTAP19-4Q3LI73 84 aa7.24□□□□□ -1.25
CRNDE-207ENST00000559598 GJC2Q5T442 439 aaPredicted RBP7.24□□□□□ -1.25
CRNDE-207ENST00000559598 OLFML2BQ68BL8 750 aa7.24□□□□□ -1.25
CRNDE-207ENST00000559598 JAMLQ86YT9 394 aa7.24□□□□□ -1.25
CRNDE-207ENST00000559598 IRF2BP1Q8IU81 584 aa7.24□□□□□ -1.25
CRNDE-207ENST00000559598 KLHDC4Q8TBB5 520 aa7.24□□□□□ -1.25
CRNDE-207ENST00000559598 C12orf42Q96LP6 360 aa7.24□□□□□ -1.25
CRNDE-207ENST00000559598 DIRC2Q96SL1 478 aa7.24□□□□□ -1.25
CRNDE-207ENST00000559598 KRTAP4-7Q9BYR0 210 aa7.24□□□□□ -1.25
CRNDE-207ENST00000559598 TRIM55Q9BYV6 548 aa7.24□□□□□ -1.25
CRNDE-207ENST00000559598 EPN3Q9H201 632 aa7.24□□□□□ -1.25
CRNDE-207ENST00000559598 SLC5A4Q9NY91 659 aa7.24□□□□□ -1.25
CRNDE-207ENST00000559598 ABCF2Q9UG63 623 aa7.24□□□□□ -1.25
CRNDE-207ENST00000559598 PTPRCP08575 1304 aa7.24□□□□□ -1.25
CRNDE-207ENST00000559598 TRIM43BA6NCK2 446 aa7.23□□□□□ -1.25
CRNDE-207ENST00000559598 KIAA0355O15063 1070 aa7.23□□□□□ -1.25
CRNDE-207ENST00000559598 STRNO43815 780 aa7.23□□□□□ -1.25
CRNDE-207ENST00000559598 ITGAVP06756 1048 aa7.23□□□□□ -1.25
CRNDE-207ENST00000559598 PNLIPP16233 465 aa7.23□□□□□ -1.25
CRNDE-207ENST00000559598 PRKCAP17252 672 aa7.23□□□□□ -1.25
CRNDE-207ENST00000559598 DEKP35659 375 aaKnown RBP7.23□□□□□ -1.25
CRNDE-207ENST00000559598 IL15P40933 162 aaPredicted RBP7.23□□□□□ -1.25
CRNDE-207ENST00000559598 PHKA1P46020 1223 aa7.23□□□□□ -1.25
CRNDE-207ENST00000559598 RFX5P48382 616 aaPredicted RBP7.23□□□□□ -1.25
CRNDE-207ENST00000559598 SEPHS1P49903 392 aa7.23□□□□□ -1.25
CRNDE-207ENST00000559598 USP14P54578 494 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms