RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 USO1O60763 962 aaKnown RBP16.59■□□□□ 0.25
LRRC28-213ENST00000559399 ATP2B1P20020 1258 aa16.59■□□□□ 0.25
LRRC28-213ENST00000559399 GLRA2P23416 452 aa16.59■□□□□ 0.25
LRRC28-213ENST00000559399 MCM7P33993 719 aa16.59■□□□□ 0.25
LRRC28-213ENST00000559399 AMHR2Q16671 573 aa16.59■□□□□ 0.25
LRRC28-213ENST00000559399 ATAT1Q5SQI0 421 aa16.59■□□□□ 0.25
LRRC28-213ENST00000559399 KIAA1841Q6NSI8 718 aa16.59■□□□□ 0.25
LRRC28-213ENST00000559399 C12orf76Q8N812 135 aaPredicted RBP16.59■□□□□ 0.25
LRRC28-213ENST00000559399 GAD1Q99259 594 aa16.59■□□□□ 0.25
LRRC28-213ENST00000559399 POLR3FQ9H1D9 316 aaPredicted RBP16.59■□□□□ 0.25
LRRC28-213ENST00000559399 TMEM60Q9H2L4 133 aa16.59■□□□□ 0.25
LRRC28-213ENST00000559399 LIMCH1Q9UPQ0 1083 aa16.59■□□□□ 0.25
LRRC28-213ENST00000559399 PRG3Q9Y2Y8 225 aaPredicted RBP16.59■□□□□ 0.25
LRRC28-213ENST00000559399 ARL5CA6NH57 179 aa16.58■□□□□ 0.24
LRRC28-213ENST00000559399 C2CD4DB7Z1M9 353 aa16.58■□□□□ 0.24
LRRC28-213ENST00000559399 SEC24BO95487 1268 aa16.58■□□□□ 0.24
LRRC28-213ENST00000559399 SSBP05455 408 aaKnown RBP eCLIP16.58■□□□□ 0.24
LRRC28-213ENST00000559399 URODP06132 367 aa16.58■□□□□ 0.24
LRRC28-213ENST00000559399 WEE2P0C1S8 567 aa16.58■□□□□ 0.24
LRRC28-213ENST00000559399 XRCC6P12956 609 aaKnown RBP eCLIP16.58■□□□□ 0.24
LRRC28-213ENST00000559399 ARF4P18085 180 aaPredicted RBP16.58■□□□□ 0.24
LRRC28-213ENST00000559399 GUCY1B3Q02153 619 aa16.58■□□□□ 0.24
LRRC28-213ENST00000559399 NHLH1Q02575 133 aa16.58■□□□□ 0.24
LRRC28-213ENST00000559399 COLGALT2Q8IYK4 626 aa16.58■□□□□ 0.24
LRRC28-213ENST00000559399 ASIC4Q96FT7 647 aa16.58■□□□□ 0.24
LRRC28-213ENST00000559399 C8orf76Q96K31 380 aa16.58■□□□□ 0.24
LRRC28-213ENST00000559399 RNF39Q9H2S5 420 aa16.58■□□□□ 0.24
LRRC28-213ENST00000559399 NXF3Q9H4D5 531 aaKnown RBP16.58■□□□□ 0.24
LRRC28-213ENST00000559399 SFXN1Q9H9B4 322 aa16.58■□□□□ 0.24
LRRC28-213ENST00000559399 TUFT1Q9NNX1 390 aa16.58■□□□□ 0.24
LRRC28-213ENST00000559399 MRPL17Q9NRX2 175 aaKnown RBP16.58■□□□□ 0.24
LRRC28-213ENST00000559399 MARCH5Q9NX47 278 aa16.58■□□□□ 0.24
LRRC28-213ENST00000559399 HES2Q9Y543 173 aa16.58■□□□□ 0.24
LRRC28-213ENST00000559399 A0A087WWV3 80 aa16.57■□□□□ 0.24
LRRC28-213ENST00000559399 LRRIQ4A6NIV6 560 aa16.57■□□□□ 0.24
LRRC28-213ENST00000559399 SPDYE4A6NLX3 237 aa16.57■□□□□ 0.24
LRRC28-213ENST00000559399 B4GALT5O43286 388 aa16.57■□□□□ 0.24
LRRC28-213ENST00000559399 SOD2P04179 222 aa16.57■□□□□ 0.24
LRRC28-213ENST00000559399 CNPP09543 421 aaKnown RBP16.57■□□□□ 0.24
LRRC28-213ENST00000559399 SPATA31C1P0DKV0 1188 aa16.57■□□□□ 0.24
LRRC28-213ENST00000559399 KLRC2P26717 231 aa16.57■□□□□ 0.24
LRRC28-213ENST00000559399 OR1G1P47890 313 aa16.57■□□□□ 0.24
LRRC28-213ENST00000559399 SCNN1GP51170 649 aa16.57■□□□□ 0.24
LRRC28-213ENST00000559399 CLCN4P51793 760 aa16.57■□□□□ 0.24
LRRC28-213ENST00000559399 ORC2Q13416 577 aaPredicted RBP16.57■□□□□ 0.24
LRRC28-213ENST00000559399 MTMR3Q13615 1198 aa16.57■□□□□ 0.24
LRRC28-213ENST00000559399 CCDC83Q8IWF9 413 aa16.57■□□□□ 0.24
LRRC28-213ENST00000559399 FBXL6Q8N531 539 aa16.57■□□□□ 0.24
LRRC28-213ENST00000559399 TDRD5Q8NAT2 981 aaKnown RBP16.57■□□□□ 0.24
LRRC28-213ENST00000559399 MCPH1Q8NEM0 835 aa16.57■□□□□ 0.24
LRRC28-213ENST00000559399 ZFP42Q96MM3 310 aa16.57■□□□□ 0.24
LRRC28-213ENST00000559399 KLHL5Q96PQ7 755 aa16.57■□□□□ 0.24
LRRC28-213ENST00000559399 LLPHQ9BRT6 129 aaKnown RBP16.57■□□□□ 0.24
LRRC28-213ENST00000559399 HERC2P3Q9BVR0 1158 aa16.57■□□□□ 0.24
LRRC28-213ENST00000559399 APOL6Q9BWW8 343 aa16.57■□□□□ 0.24
LRRC28-213ENST00000559399 GPRC5CQ9NQ84 441 aa16.57■□□□□ 0.24
LRRC28-213ENST00000559399 DBR1Q9UK59 544 aaKnown RBP16.57■□□□□ 0.24
LRRC28-213ENST00000559399 SSX2IPQ9Y2D8 614 aa16.57■□□□□ 0.24
LRRC28-213ENST00000559399 GIT1Q9Y2X7 761 aa16.57■□□□□ 0.24
LRRC28-213ENST00000559399 C2CD2LO14523 706 aa16.56■□□□□ 0.24
LRRC28-213ENST00000559399 LILRB3O75022 631 aa16.56■□□□□ 0.24
LRRC28-213ENST00000559399 MED24O75448 989 aa16.56■□□□□ 0.24
LRRC28-213ENST00000559399 NR1I2O75469 434 aa16.56■□□□□ 0.24
LRRC28-213ENST00000559399 OR52Z1P0C646 297 aa16.56■□□□□ 0.24
LRRC28-213ENST00000559399 DSC1Q08554 894 aa16.56■□□□□ 0.24
LRRC28-213ENST00000559399 KANK3Q6NY19 840 aa16.56■□□□□ 0.24
LRRC28-213ENST00000559399 SLC27A1Q6PCB7 646 aa16.56■□□□□ 0.24
LRRC28-213ENST00000559399 TMC5Q6UXY8 1006 aa16.56■□□□□ 0.24
LRRC28-213ENST00000559399 MAEAQ7L5Y9 396 aa16.56■□□□□ 0.24
LRRC28-213ENST00000559399 CATSPER3Q86XQ3 398 aa16.56■□□□□ 0.24
LRRC28-213ENST00000559399 KREMEN2Q8NCW0 462 aa16.56■□□□□ 0.24
LRRC28-213ENST00000559399 ERMNQ8TAM6 284 aa16.56■□□□□ 0.24
LRRC28-213ENST00000559399 NACC1Q96RE7 527 aa16.56■□□□□ 0.24
LRRC28-213ENST00000559399 RPS6KC1Q96S38 1066 aa16.56■□□□□ 0.24
LRRC28-213ENST00000559399 FOXP1Q9H334 677 aaPredicted RBP16.56■□□□□ 0.24
LRRC28-213ENST00000559399 SORCS3Q9UPU3 1222 aa16.56■□□□□ 0.24
LRRC28-213ENST00000559399 A0A1B0GUA9 196 aa16.55■□□□□ 0.24
LRRC28-213ENST00000559399 NPTXRO95502 500 aa16.55■□□□□ 0.24
LRRC28-213ENST00000559399 GLUD2P49448 558 aa16.55■□□□□ 0.24
LRRC28-213ENST00000559399 HMGN5P82970 282 aaKnown RBP16.55■□□□□ 0.24
LRRC28-213ENST00000559399 CDCA2Q69YH5 1023 aaPredicted RBP16.55■□□□□ 0.24
LRRC28-213ENST00000559399 POTEGQ6S5H5 508 aa16.55■□□□□ 0.24
LRRC28-213ENST00000559399 PPP4R3CPQ6ZMV5 832 aa16.55■□□□□ 0.24
LRRC28-213ENST00000559399 GPR149Q86SP6 731 aa16.55■□□□□ 0.24
LRRC28-213ENST00000559399 ALYREFQ86V81 257 aaKnown RBP16.55■□□□□ 0.24
LRRC28-213ENST00000559399 ZBTB8OSQ8IWT0 167 aa16.55■□□□□ 0.24
LRRC28-213ENST00000559399 UBALD2Q8IYN6 164 aa16.55■□□□□ 0.24
LRRC28-213ENST00000559399 RNF168Q8IYW5 571 aaPredicted RBP16.55■□□□□ 0.24
LRRC28-213ENST00000559399 ZDHHC14Q8IZN3 488 aa16.55■□□□□ 0.24
LRRC28-213ENST00000559399 PRIMPOLQ96LW4 560 aa16.55■□□□□ 0.24
LRRC28-213ENST00000559399 PRRX2Q99811 253 aa16.55■□□□□ 0.24
LRRC28-213ENST00000559399 POLR3CQ9BUI4 534 aaPredicted RBP16.55■□□□□ 0.24
LRRC28-213ENST00000559399 PRMT7Q9NVM4 692 aaPredicted RBP16.55■□□□□ 0.24
LRRC28-213ENST00000559399 USTQ9Y2C2 406 aa16.55■□□□□ 0.24
LRRC28-213ENST00000559399 ZMYM2Q9UBW7 1377 aa16.54■□□□□ 0.24
LRRC28-213ENST00000559399 MUC6Q6W4X9 2439 aa16.54■□□□□ 0.24
LRRC28-213ENST00000559399 EFEMP2O95967 443 aa16.54■□□□□ 0.24
LRRC28-213ENST00000559399 ADH1AP07327 375 aa16.54■□□□□ 0.24
LRRC28-213ENST00000559399 AKAP5P24588 427 aa16.54■□□□□ 0.24
LRRC28-213ENST00000559399 RBM25P49756 843 aaKnown RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms