RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 ODF2LQ9ULJ1 636 aa4.82□□□□□ -1.64
SNX1-205ENST00000559339 MTMR6Q9Y217 621 aa4.82□□□□□ -1.64
SNX1-205ENST00000559339 FAM50BQ9Y247 325 aa4.82□□□□□ -1.64
SNX1-205ENST00000559339 ATP6V1DQ9Y5K8 247 aa4.82□□□□□ -1.64
SNX1-205ENST00000559339 SRPRBQ9Y5M8 271 aaKnown RBP4.82□□□□□ -1.64
SNX1-205ENST00000559339 CLIC4Q9Y696 253 aa4.82□□□□□ -1.64
SNX1-205ENST00000559339 UNC80Q8N2C7 3258 aa4.82□□□□□ -1.64
SNX1-205ENST00000559339 TTC3P53804 2025 aa4.82□□□□□ -1.64
SNX1-205ENST00000559339 CHD9Q3L8U1 2897 aa4.82□□□□□ -1.64
SNX1-205ENST00000559339 COL4A6Q14031 1691 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 MICAL3Q7RTP6 2002 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 ARL5CA6NH57 179 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 RBAK-RBAKDNI3L0D1 243 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 STK25O00506 426 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 DLL1O00548 723 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 GRM6O15303 877 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 B4GALT5O43286 388 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 PPP6R2O75170 966 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 NPTXRO95502 500 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 POMCP01189 267 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 PRKCBP05771 671 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 LINC00271P0C7V0 271 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 ZSCAN22P10073 491 aaPredicted RBP4.81□□□□□ -1.64
SNX1-205ENST00000559339 PLS3P13797 630 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 ATF7P17544 494 aaPredicted RBP4.81□□□□□ -1.64
SNX1-205ENST00000559339 PLCG1P19174 1290 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 KCNA5P22460 613 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 MLH1P40692 756 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 NPTX2P47972 431 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 YARSP54577 528 aaKnown RBP4.81□□□□□ -1.64
SNX1-205ENST00000559339 SLC12A3P55017 1021 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 PLCB3Q01970 1234 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 RAD51AP2Q09MP3 1159 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 RESTQ13127 1097 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 DHX8Q14562 1220 aaKnown RBP4.81□□□□□ -1.64
SNX1-205ENST00000559339 KARSQ15046 597 aaKnown RBP4.81□□□□□ -1.64
SNX1-205ENST00000559339 PUS10Q3MIT2 529 aaKnown RBP4.81□□□□□ -1.64
SNX1-205ENST00000559339 DCAF4L1Q3SXM0 396 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 TCEAL5Q5H9L2 206 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 ATF7IP2Q5U623 682 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 POTEHQ6S545 545 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 CCDC73Q6ZRK6 1079 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 LRRC55Q6ZSA7 311 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 C1orf186Q6ZWK4 172 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 MRPL10Q7Z7H8 261 aaKnown RBP4.81□□□□□ -1.64
SNX1-205ENST00000559339 RBM23Q86U06 439 aaKnown RBP4.81□□□□□ -1.64
SNX1-205ENST00000559339 MYCT1Q8N699 235 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 SPRYD3Q8NCJ5 442 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 SPPL3Q8TCT6 385 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 KCNG4Q8TDN1 519 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 SPIRE2Q8WWL2 714 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 MRPS27Q92552 414 aaKnown RBP4.81□□□□□ -1.64
SNX1-205ENST00000559339 LARP4BQ92615 738 aaKnown RBP4.81□□□□□ -1.64
SNX1-205ENST00000559339 LPPQ93052 612 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 PABPC5Q96DU9 382 aaKnown RBP4.81□□□□□ -1.64
SNX1-205ENST00000559339 BICD1Q96G01 975 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 PHF12Q96QT6 1004 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 GAD1Q99259 594 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 PYM1Q9BRP8 204 aaKnown RBP4.81□□□□□ -1.64
SNX1-205ENST00000559339 NTPCRQ9BSD7 190 aaKnown RBP4.81□□□□□ -1.64
SNX1-205ENST00000559339 KIFC3Q9BVG8 833 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 APOL6Q9BWW8 343 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 EIF2AQ9BY44 585 aaKnown RBP4.81□□□□□ -1.64
SNX1-205ENST00000559339 MRPL4Q9BYD3 311 aaKnown RBP4.81□□□□□ -1.64
SNX1-205ENST00000559339 LRRC27Q9C0I9 530 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 GBP3Q9H0R5 595 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 IGFLR1Q9H665 355 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 TMEM134Q9H6X4 195 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 CWH43Q9H720 699 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 TLE6Q9H808 572 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 UBE2ZQ9H832 354 aaPredicted RBP4.81□□□□□ -1.64
SNX1-205ENST00000559339 PARVGQ9HBI0 331 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 TOPORSQ9NS56 1045 aaPredicted RBP4.81□□□□□ -1.64
SNX1-205ENST00000559339 TBC1D13Q9NVG8 400 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 CLDND1Q9NY35 253 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 STK17AQ9UEE5 414 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 SSX2IPQ9Y2D8 614 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 FAN1Q9Y2M0 1017 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 GIT1Q9Y2X7 761 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 HES2Q9Y543 173 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 IPPQ9Y573 584 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 MORC2Q9Y6X9 1032 aaPredicted RBP4.81□□□□□ -1.64
SNX1-205ENST00000559339 XIRP2A4UGR9 3374 aa4.81□□□□□ -1.64
SNX1-205ENST00000559339 PRRC2BQ5JSZ5 2229 aaKnown RBP4.81□□□□□ -1.64
SNX1-205ENST00000559339 EVPLQ92817 2033 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.8□□□□□ -1.64
SNX1-205ENST00000559339 SFI1A8K8P3 1242 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 NT5C1B-RDH14C9J2C7 533 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 SPTLC2O15270 562 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 SLC16A4O15374 487 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 MAP3K13O43283 966 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 TRAK2O60296 914 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 FAM13AO94988 1023 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 YEATS4O95619 227 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 F13A1P00488 732 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 THP07101 528 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 GALTP07902 379 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 AKAP5P24588 427 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 PBX3P40426 434 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 STAT6P42226 847 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 110.1 ms