RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 MED15Q96RN5 788 aa16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 IFIH1Q9BYX4 1025 aaKnown RBP16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 IKZF4Q9H2S9 585 aa16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 PDZD7Q9H5P4 517 aa16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 TMEM206Q9H813 350 aa16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 TRAF3IP3Q9Y228 551 aa16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 GINS2Q9Y248 185 aa16.26■□□□□ 0.19
SNRPA1-207ENST00000559309 COL4A6Q14031 1691 aa16.25■□□□□ 0.19
SNRPA1-207ENST00000559309 ANKRD63C9JTQ0 380 aa16.25■□□□□ 0.19
SNRPA1-207ENST00000559309 PDXKO00764 312 aa16.25■□□□□ 0.19
SNRPA1-207ENST00000559309 LETM1O95202 739 aaPredicted RBP16.25■□□□□ 0.19
SNRPA1-207ENST00000559309 EPHB4P54760 987 aa16.25■□□□□ 0.19
SNRPA1-207ENST00000559309 FAM189BP81408 668 aa16.25■□□□□ 0.19
SNRPA1-207ENST00000559309 PAK2Q13177 524 aa16.25■□□□□ 0.19
SNRPA1-207ENST00000559309 KNOP1Q1ED39 458 aaKnown RBP16.25■□□□□ 0.19
SNRPA1-207ENST00000559309 CT47A1Q5JQC4 288 aaPredicted RBP16.25■□□□□ 0.19
SNRPA1-207ENST00000559309 RASIP1Q5U651 963 aa16.25■□□□□ 0.19
SNRPA1-207ENST00000559309 CNKSR3Q6P9H4 555 aa16.25■□□□□ 0.19
SNRPA1-207ENST00000559309 STXBP4Q6ZWJ1 553 aa16.25■□□□□ 0.19
SNRPA1-207ENST00000559309 CATSPER4Q7RTX7 472 aa16.25■□□□□ 0.19
SNRPA1-207ENST00000559309 MYOCDQ8IZQ8 938 aa16.25■□□□□ 0.19
SNRPA1-207ENST00000559309 TARS2Q9BW92 718 aaKnown RBP16.25■□□□□ 0.19
SNRPA1-207ENST00000559309 FTHL17Q9BXU8 183 aa16.25■□□□□ 0.19
SNRPA1-207ENST00000559309 MRPL4Q9BYD3 311 aaKnown RBP16.25■□□□□ 0.19
SNRPA1-207ENST00000559309 TSPYL2Q9H2G4 693 aaPredicted RBP16.25■□□□□ 0.19
SNRPA1-207ENST00000559309 RGS18Q9NS28 235 aa16.25■□□□□ 0.19
SNRPA1-207ENST00000559309 TTC3P53804 2025 aa16.24■□□□□ 0.19
SNRPA1-207ENST00000559309 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.24■□□□□ 0.19
SNRPA1-207ENST00000559309 ZNF623O75123 536 aa16.24■□□□□ 0.19
SNRPA1-207ENST00000559309 TOM1L1O75674 476 aa16.24■□□□□ 0.19
SNRPA1-207ENST00000559309 PPP1R2P41236 205 aa16.24■□□□□ 0.19
SNRPA1-207ENST00000559309 MCL1Q07820 350 aa16.24■□□□□ 0.19
SNRPA1-207ENST00000559309 PPIGQ13427 754 aaKnown RBP eCLIP16.24■□□□□ 0.192e-11■■□□□ 12.5
SNRPA1-207ENST00000559309 PRPF4BQ13523 1007 aaKnown RBP16.24■□□□□ 0.19
SNRPA1-207ENST00000559309 EEF1DP3Q658K8 133 aa16.24■□□□□ 0.19
SNRPA1-207ENST00000559309 MRPL10Q7Z7H8 261 aaKnown RBP16.24■□□□□ 0.19
SNRPA1-207ENST00000559309 SLC9A9Q8IVB4 645 aa16.24■□□□□ 0.19
SNRPA1-207ENST00000559309 MLKLQ8NB16 471 aa16.24■□□□□ 0.19
SNRPA1-207ENST00000559309 DHTKD1Q96HY7 919 aaPredicted RBP16.24■□□□□ 0.19
SNRPA1-207ENST00000559309 SCLT1Q96NL6 688 aa16.24■□□□□ 0.19
SNRPA1-207ENST00000559309 GDF15Q99988 308 aa16.24■□□□□ 0.19
SNRPA1-207ENST00000559309 SEMA6BQ9H3T3 888 aa16.24■□□□□ 0.19
SNRPA1-207ENST00000559309 DMAC2Q9NW81 257 aa16.24■□□□□ 0.19
SNRPA1-207ENST00000559309 CGNQ9P2M7 1197 aaKnown RBP16.24■□□□□ 0.19
SNRPA1-207ENST00000559309 PRKAG2Q9UGJ0 569 aa16.24■□□□□ 0.19
SNRPA1-207ENST00000559309 USP20Q9Y2K6 914 aa16.24■□□□□ 0.19
SNRPA1-207ENST00000559309 A0A0B4J269 797 aa16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 TISP43B9A030 160 aa16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 C9IYK1 514 aa16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 BIN1O00499 593 aa16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 ERLIN2O94905 339 aa16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 SYN1P17600 705 aa16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 FPGSQ05932 587 aa16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 STRN3Q13033 797 aa16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 MYBPC2Q14324 1141 aa16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 DPCR1Q3MIW9 517 aa16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 ZSCAN23Q3MJ62 389 aa16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 TMEM240Q5SV17 173 aa16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 ATF7IP2Q5U623 682 aa16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 NOTUMQ6P988 496 aa16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 SLC27A1Q6PCB7 646 aa16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 ZNF598Q86UK7 904 aaKnown RBP16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 RPUSD2Q8IZ73 545 aaKnown RBP16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 SEPT8Q92599 483 aa16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 FBXL18Q96ME1 805 aa16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 GBP3Q9H0R5 595 aa16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 TYW1Q9NV66 732 aaKnown RBP16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 ZMYND8Q9ULU4 1186 aaPredicted RBP16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 EXOC7Q9UPT5 735 aa16.23■□□□□ 0.19
SNRPA1-207ENST00000559309 CUL9Q8IWT3 2517 aa16.22■□□□□ 0.19
SNRPA1-207ENST00000559309 A0A0U1RQF3 1178 aa16.22■□□□□ 0.19
SNRPA1-207ENST00000559309 ENPP3O14638 875 aa16.22■□□□□ 0.19
SNRPA1-207ENST00000559309 N4BP3O15049 544 aa16.22■□□□□ 0.19
SNRPA1-207ENST00000559309 BAIAP3O94812 1187 aa16.22■□□□□ 0.19
SNRPA1-207ENST00000559309 KIF20AO95235 890 aa16.22■□□□□ 0.19
SNRPA1-207ENST00000559309 ADRB2P07550 413 aa16.22■□□□□ 0.19
SNRPA1-207ENST00000559309 ATF7P17544 494 aaPredicted RBP16.22■□□□□ 0.19
SNRPA1-207ENST00000559309 GARTP22102 1010 aa16.22■□□□□ 0.19
SNRPA1-207ENST00000559309 BMP8BP34820 402 aa16.22■□□□□ 0.19
SNRPA1-207ENST00000559309 PMS1P54277 932 aaKnown RBP16.22■□□□□ 0.19
SNRPA1-207ENST00000559309 ISM2Q6H9L7 571 aa16.22■□□□□ 0.19
SNRPA1-207ENST00000559309 TTI2Q6NXR4 508 aa16.22■□□□□ 0.19
SNRPA1-207ENST00000559309 MPZL3Q6UWV2 235 aa16.22■□□□□ 0.19
SNRPA1-207ENST00000559309 SMG8Q8ND04 991 aaKnown RBP16.22■□□□□ 0.19
SNRPA1-207ENST00000559309 CPB2Q96IY4 423 aa16.22■□□□□ 0.19
SNRPA1-207ENST00000559309 ZBTB45Q96K62 511 aaPredicted RBP16.22■□□□□ 0.19
SNRPA1-207ENST00000559309 CDT1Q9H211 546 aa16.22■□□□□ 0.19
SNRPA1-207ENST00000559309 AGPAT3Q9NRZ7 376 aa16.22■□□□□ 0.19
SNRPA1-207ENST00000559309 PIN4Q9Y237 131 aaKnown RBP16.22■□□□□ 0.19
SNRPA1-207ENST00000559309 RALGAPA2Q2PPJ7 1873 aa16.21■□□□□ 0.19
SNRPA1-207ENST00000559309 ABHD14A-ACY1A0A1B0GW23 586 aa16.21■□□□□ 0.19
SNRPA1-207ENST00000559309 SOX1O00570 391 aaPredicted RBP16.21■□□□□ 0.19
SNRPA1-207ENST00000559309 HNRNPDLO14979 420 aaKnown RBP16.21■□□□□ 0.19
SNRPA1-207ENST00000559309 INPPL1O15357 1258 aa16.21■□□□□ 0.19
SNRPA1-207ENST00000559309 MEFVO15553 781 aaPredicted RBP16.21■□□□□ 0.19
SNRPA1-207ENST00000559309 MCF2P10911 925 aa16.21■□□□□ 0.19
SNRPA1-207ENST00000559309 CCNE1P24864 410 aa16.21■□□□□ 0.19
SNRPA1-207ENST00000559309 POU5F1Q01860 360 aaKnown RBP16.21■□□□□ 0.19
SNRPA1-207ENST00000559309 TYRO3Q06418 890 aa16.21■□□□□ 0.19
SNRPA1-207ENST00000559309 NFX1Q12986 1120 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms