RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 TEX28O15482 410 aa18.15■□□□□ 0.5
CDC42BPB-205ENST00000559245 P4HBP07237 508 aaKnown RBP18.15■□□□□ 0.5
CDC42BPB-205ENST00000559245 CFHP08603 1231 aa18.15■□□□□ 0.5
CDC42BPB-205ENST00000559245 MYBP10242 640 aa18.15■□□□□ 0.5
CDC42BPB-205ENST00000559245 ITGA4P13612 1032 aa18.15■□□□□ 0.5
CDC42BPB-205ENST00000559245 RFC5P40937 340 aa18.15■□□□□ 0.5
CDC42BPB-205ENST00000559245 TOB2Q14106 344 aaPredicted RBP18.15■□□□□ 0.5
CDC42BPB-205ENST00000559245 GALNT17Q6IS24 598 aa18.15■□□□□ 0.5
CDC42BPB-205ENST00000559245 ELMSAN1Q6PJG2 1045 aa18.15■□□□□ 0.5
CDC42BPB-205ENST00000559245 CYP26C1Q6V0L0 522 aa18.15■□□□□ 0.5
CDC42BPB-205ENST00000559245 KRT25Q7Z3Z0 450 aa18.15■□□□□ 0.5
CDC42BPB-205ENST00000559245 STAMQ92783 540 aa18.15■□□□□ 0.5
CDC42BPB-205ENST00000559245 AIFM3Q96NN9 605 aa18.15■□□□□ 0.5
CDC42BPB-205ENST00000559245 RHOBTB2Q9BYZ6 727 aa18.15■□□□□ 0.5
CDC42BPB-205ENST00000559245 KCNMB3Q9NPA1 279 aa18.15■□□□□ 0.5
CDC42BPB-205ENST00000559245 UBN1Q9NPG3 1134 aa18.15■□□□□ 0.5
CDC42BPB-205ENST00000559245 WNT16Q9UBV4 365 aa18.15■□□□□ 0.5
CDC42BPB-205ENST00000559245 DPP7Q9UHL4 492 aa18.15■□□□□ 0.5
CDC42BPB-205ENST00000559245 CLUHO75153 1309 aa18.15■□□□□ 0.5
CDC42BPB-205ENST00000559245 CACNA1AO00555 2505 aa18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 CACNA1IQ9P0X4 2223 aa18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 KRBA1A5PL33 1030 aa18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 STK25O00506 426 aa18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 CPLX1O14810 134 aa18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 ASAP2O43150 1006 aa18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 RFPL2O75678 378 aa18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 GLUD1P00367 558 aa18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 ID4P47928 161 aa18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 GLUD2P49448 558 aa18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 KIAA0319Q5VV43 1072 aa18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 RNF168Q8IYW5 571 aaPredicted RBP18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 FAM177A1Q8N128 213 aaPredicted RBP18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 RNF149Q8NC42 400 aa18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 TCP11Q8WWU5 503 aa18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 FAM20AQ96MK3 541 aa18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 MYADMQ96S97 322 aa18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 GAD1Q99259 594 aa18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 EIF2AQ9BY44 585 aaKnown RBP18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 RXFP1Q9HBX9 757 aa18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 EPS15L1Q9UBC2 864 aa18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 IPPQ9Y573 584 aa18.14■□□□□ 0.49
CDC42BPB-205ENST00000559245 ARL5CA6NH57 179 aa18.13■□□□□ 0.49
CDC42BPB-205ENST00000559245 GAS2O43903 313 aaKnown RBP18.13■□□□□ 0.49
CDC42BPB-205ENST00000559245 ERLIN2O94905 339 aa18.13■□□□□ 0.49
CDC42BPB-205ENST00000559245 EFEMP2O95967 443 aa18.13■□□□□ 0.49
CDC42BPB-205ENST00000559245 YWHABP31946 246 aaKnown RBP18.13■□□□□ 0.49
CDC42BPB-205ENST00000559245 MLH1P40692 756 aa18.13■□□□□ 0.49
CDC42BPB-205ENST00000559245 DSG1Q02413 1049 aa18.13■□□□□ 0.49
CDC42BPB-205ENST00000559245 DSC1Q08554 894 aa18.13■□□□□ 0.49
CDC42BPB-205ENST00000559245 EMC2Q15006 297 aa18.13■□□□□ 0.49
CDC42BPB-205ENST00000559245 RUFY3Q7L099 469 aa18.13■□□□□ 0.49
CDC42BPB-205ENST00000559245 ERMP1Q7Z2K6 904 aa18.13■□□□□ 0.49
CDC42BPB-205ENST00000559245 FERMT3Q86UX7 667 aa18.13■□□□□ 0.49
CDC42BPB-205ENST00000559245 C4orf19Q8IY42 314 aa18.13■□□□□ 0.49
CDC42BPB-205ENST00000559245 SLC44A3Q8N4M1 653 aa18.13■□□□□ 0.49
CDC42BPB-205ENST00000559245 SMG7Q92540 1137 aaKnown RBP18.13■□□□□ 0.49
CDC42BPB-205ENST00000559245 LXNQ9BS40 222 aa18.13■□□□□ 0.49
CDC42BPB-205ENST00000559245 RNF39Q9H2S5 420 aa18.13■□□□□ 0.49
CDC42BPB-205ENST00000559245 MIOSQ9NXC5 875 aa18.13■□□□□ 0.49
CDC42BPB-205ENST00000559245 CA14Q9ULX7 337 aa18.13■□□□□ 0.49
CDC42BPB-205ENST00000559245 F8W810 466 aa18.12■□□□□ 0.49
CDC42BPB-205ENST00000559245 SPATA31D3P0C874 917 aa18.12■□□□□ 0.49
CDC42BPB-205ENST00000559245 RFX1P22670 979 aa18.12■□□□□ 0.49
CDC42BPB-205ENST00000559245 AXLP30530 894 aa18.12■□□□□ 0.49
CDC42BPB-205ENST00000559245 SCNN1GP51170 649 aa18.12■□□□□ 0.49
CDC42BPB-205ENST00000559245 EPHA7Q15375 998 aa18.12■□□□□ 0.49
CDC42BPB-205ENST00000559245 XKR9Q5GH70 373 aa18.12■□□□□ 0.49
CDC42BPB-205ENST00000559245 SPATA31D4Q6ZUB0 917 aa18.12■□□□□ 0.49
CDC42BPB-205ENST00000559245 OTUD6AQ7L8S5 288 aa18.12■□□□□ 0.49
CDC42BPB-205ENST00000559245 HDAC7Q8WUI4 952 aa18.12■□□□□ 0.49
CDC42BPB-205ENST00000559245 NXPE3Q969Y0 559 aa18.12■□□□□ 0.49
CDC42BPB-205ENST00000559245 ZNF707Q96C28 371 aaPredicted RBP18.12■□□□□ 0.49
CDC42BPB-205ENST00000559245 ZNF274Q96GC6 653 aaPredicted RBP18.12■□□□□ 0.49
CDC42BPB-205ENST00000559245 CPB2Q96IY4 423 aa18.12■□□□□ 0.49
CDC42BPB-205ENST00000559245 RGL1Q9NZL6 768 aa18.12■□□□□ 0.49
CDC42BPB-205ENST00000559245 KCNJ14Q9UNX9 436 aa18.12■□□□□ 0.49
CDC42BPB-205ENST00000559245 HES2Q9Y543 173 aa18.12■□□□□ 0.49
CDC42BPB-205ENST00000559245 CCDC194A0A1B0GVG4 234 aa18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 ZBTB39O15060 712 aa18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 TSPAN1O60635 241 aa18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 NR1I2O75469 434 aa18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 SRFP11831 508 aa18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 GCFC2P16383 781 aaKnown RBP18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 PCBP1Q15365 356 aaKnown RBP eCLIP18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 PPP4R3AQ6IN85 833 aa18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 NOTUMQ6P988 496 aa18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 CPLX2Q6PUV4 134 aaKnown RBP18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 NEK8Q86SG6 692 aa18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 PALB2Q86YC2 1186 aa18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 HAS1Q92839 578 aa18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 CCDC51Q96ER9 411 aa18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 ZFP42Q96MM3 310 aa18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 MTRQ99707 1265 aa18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 LARP6Q9BRS8 491 aaKnown RBP18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 PLEKHA4Q9H4M7 779 aa18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 TBC1D17Q9HA65 648 aa18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 PIDD1Q9HB75 910 aa18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 ZSWIM6Q9HCJ5 1215 aa18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 CHST7Q9NS84 486 aa18.11■□□□□ 0.49
CDC42BPB-205ENST00000559245 DMXL1Q9Y485 3027 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms