RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 PCNAP12004 261 aa6.27□□□□□ -1.4
CTDSPL2-206ENST00000559175 GAP43P17677 238 aa6.27□□□□□ -1.4
CTDSPL2-206ENST00000559175 TFE3P19532 575 aaPredicted RBP6.27□□□□□ -1.4
CTDSPL2-206ENST00000559175 GSK3AP49840 483 aa6.27□□□□□ -1.4
CTDSPL2-206ENST00000559175 TBC1D8BQ0IIM8 1120 aa6.27□□□□□ -1.4
CTDSPL2-206ENST00000559175 IKQ13123 557 aaPredicted RBP6.27□□□□□ -1.4
CTDSPL2-206ENST00000559175 SNX1Q13596 522 aa6.27□□□□□ -1.4
CTDSPL2-206ENST00000559175 TMEM266Q2M3C6 531 aa6.27□□□□□ -1.4
CTDSPL2-206ENST00000559175 ARL13BQ3SXY8 428 aa6.27□□□□□ -1.4
CTDSPL2-206ENST00000559175 FNDC3BQ53EP0 1204 aaKnown RBP6.27□□□□□ -1.4
CTDSPL2-206ENST00000559175 OVCH2Q7RTZ1 564 aa6.27□□□□□ -1.4
CTDSPL2-206ENST00000559175 PPP1R42Q7Z4L9 355 aa6.27□□□□□ -1.4
CTDSPL2-206ENST00000559175 RPAP2Q8IXW5 612 aaPredicted RBP6.27□□□□□ -1.4
CTDSPL2-206ENST00000559175 KCTD6Q8NC69 237 aa6.27□□□□□ -1.4
CTDSPL2-206ENST00000559175 TGFBRAP1Q8WUH2 860 aa6.27□□□□□ -1.4
CTDSPL2-206ENST00000559175 TACO1Q9BSH4 297 aaKnown RBP6.27□□□□□ -1.4
CTDSPL2-206ENST00000559175 TRIM4Q9C037 500 aa6.27□□□□□ -1.4
CTDSPL2-206ENST00000559175 PLSCR4Q9NRQ2 329 aa6.27□□□□□ -1.4
CTDSPL2-206ENST00000559175 ARGLU1Q9NWB6 273 aaPredicted RBP6.27□□□□□ -1.4
CTDSPL2-206ENST00000559175 LIMCH1Q9UPQ0 1083 aa6.27□□□□□ -1.4
CTDSPL2-206ENST00000559175 TNS3Q68CZ2 1445 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 BLACEA4D250 179 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 AP3B1O00203 1094 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 CACNB4O00305 520 aaPredicted RBP6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 LSM1O15116 133 aaKnown RBP6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 MAN1A2O60476 641 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 AOC2O75106 756 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 SCG2P13521 617 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 PECAM1P16284 738 aaPredicted RBP6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 NFE2L1Q14494 772 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 DHCR24Q15392 516 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 PPP1R7Q15435 360 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 CCDC122Q5T0U0 273 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 SLC9A9Q8IVB4 645 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 CCDC144CPQ8IYA2 1237 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 C1orf162Q8NEQ5 155 aaPredicted RBP6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 ZNF483Q8TF39 744 aaPredicted RBP6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 HDAC7Q8WUI4 952 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 ZUFSPQ96AP4 578 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 TRIM47Q96LD4 638 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 CEP295NLQ96MC4 621 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 FAM193BQ96PV7 902 aaPredicted RBP6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 RNF39Q9H2S5 420 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 GHITMQ9H3K2 345 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 LATS2Q9NRM7 1088 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 HOMER3Q9NSC5 361 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 MOSPD1Q9UJG1 213 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 SPO11Q9Y5K1 396 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 SPATA31A6Q5VVP1 1343 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 ZSCAN5CA6NGD5 496 aaPredicted RBP6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 SOCS5O75159 536 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 MAFO75444 373 aaPredicted RBP6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 STAMBPO95630 424 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 CAVIN2O95810 425 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 HMOX1P09601 288 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 EEF2P13639 858 aaKnown RBP6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 RAG1P15918 1043 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 PDIA3P30101 505 aaKnown RBP6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 ADH7P40394 386 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 ITGA8P53708 1063 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 ARPC4P59998 168 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 C19orf57Q0VDD7 668 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 TNIP1Q15025 636 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 RABEP1Q15276 862 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 PKDCCQ504Y2 493 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 LRRC47Q8N1G4 583 aaKnown RBP6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 C3orf20Q8ND61 904 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 CCDC114Q96M63 670 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 NSRP1Q9H0G5 558 aaKnown RBP6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 BICC1Q9H694 974 aaKnown RBP6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 GJB4Q9NTQ9 266 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 PSD3Q9NYI0 1048 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 PTBP2Q9UKA9 531 aaKnown RBP6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 GJD2Q9UKL4 321 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 DENND2AQ9ULE3 1009 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 FAM184BQ9ULE4 1060 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 SLC27A5Q9Y2P5 690 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 SPEF1Q9Y4P9 236 aa6.27□□□□□ -1.41
CTDSPL2-206ENST00000559175 TRBV23-1A0A0A0MS06 115 aa6.26□□□□□ -1.41
CTDSPL2-206ENST00000559175 ZEB2O60315 1214 aa6.26□□□□□ -1.41
CTDSPL2-206ENST00000559175 APBA3O96018 575 aa6.26□□□□□ -1.41
CTDSPL2-206ENST00000559175 P4HA1P13674 534 aa6.26□□□□□ -1.41
CTDSPL2-206ENST00000559175 PCSK2P16519 638 aa6.26□□□□□ -1.41
CTDSPL2-206ENST00000559175 U2AF2P26368 475 aaKnown RBP eCLIP6.26□□□□□ -1.41
CTDSPL2-206ENST00000559175 GSTT1P30711 240 aa6.26□□□□□ -1.41
CTDSPL2-206ENST00000559175 TLX1P31314 330 aaPredicted RBP6.26□□□□□ -1.41
CTDSPL2-206ENST00000559175 USP8P40818 1118 aa6.26□□□□□ -1.41
CTDSPL2-206ENST00000559175 TUFMP49411 452 aaKnown RBP6.26□□□□□ -1.41
CTDSPL2-206ENST00000559175 ERVK-21P61565 698 aa6.26□□□□□ -1.41
CTDSPL2-206ENST00000559175 BEX3Q00994 111 aa6.26□□□□□ -1.41
CTDSPL2-206ENST00000559175 STARD3Q14849 445 aa6.26□□□□□ -1.41
CTDSPL2-206ENST00000559175 PLCL1Q15111 1095 aa6.26□□□□□ -1.41
CTDSPL2-206ENST00000559175 RPS26P11Q5JNZ5 115 aaPredicted RBP6.26□□□□□ -1.41
CTDSPL2-206ENST00000559175 BEND5Q7L4P6 421 aa6.26□□□□□ -1.41
CTDSPL2-206ENST00000559175 TREML1Q86YW5 311 aa6.26□□□□□ -1.41
CTDSPL2-206ENST00000559175 REM2Q8IYK8 340 aaPredicted RBP6.26□□□□□ -1.41
CTDSPL2-206ENST00000559175 HTRA1Q92743 480 aa6.26□□□□□ -1.41
CTDSPL2-206ENST00000559175 ZDHHC16Q969W1 377 aa6.26□□□□□ -1.41
CTDSPL2-206ENST00000559175 C18orf8Q96DM3 657 aa6.26□□□□□ -1.41
CTDSPL2-206ENST00000559175 AIFM3Q96NN9 605 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms