RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 STXBP5LQ9Y2K9 1186 aa13.96□□□□□ -0.17
CASC4-208ENST00000559151 VWA7Q9Y334 891 aa13.96□□□□□ -0.17
CASC4-208ENST00000559151 NR2E3Q9Y5X4 410 aa13.96□□□□□ -0.17
CASC4-208ENST00000559151 DAPK3O43293 454 aa13.95□□□□□ -0.18
CASC4-208ENST00000559151 HRGP04196 525 aa13.95□□□□□ -0.18
CASC4-208ENST00000559151 IFIT2P09913 472 aaKnown RBP13.95□□□□□ -0.18
CASC4-208ENST00000559151 TAL1P17542 331 aaPredicted RBP13.95□□□□□ -0.18
CASC4-208ENST00000559151 ECHS1P30084 290 aa13.95□□□□□ -0.18
CASC4-208ENST00000559151 PCOLCEQ15113 449 aa13.95□□□□□ -0.18
CASC4-208ENST00000559151 CLEC14AQ86T13 490 aa13.95□□□□□ -0.18
CASC4-208ENST00000559151 MORC4Q8TE76 937 aa13.95□□□□□ -0.18
CASC4-208ENST00000559151 NSUN6Q8TEA1 469 aaKnown RBP13.95□□□□□ -0.18
CASC4-208ENST00000559151 GFM2Q969S9 779 aaKnown RBP13.95□□□□□ -0.18
CASC4-208ENST00000559151 SPATA25Q9BR10 227 aa13.95□□□□□ -0.18
CASC4-208ENST00000559151 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.95□□□□□ -0.18
CASC4-208ENST00000559151 SIK3Q9Y2K2 1263 aa13.95□□□□□ -0.18
CASC4-208ENST00000559151 PLEKHD1A6NEE1 506 aa13.94□□□□□ -0.18
CASC4-208ENST00000559151 LRRC14BA6NHZ5 514 aa13.94□□□□□ -0.18
CASC4-208ENST00000559151 PHF2O75151 1096 aa13.94□□□□□ -0.18
CASC4-208ENST00000559151 ENDOD1O94919 500 aa13.94□□□□□ -0.18
CASC4-208ENST00000559151 PI3P19957 117 aa13.94□□□□□ -0.18
CASC4-208ENST00000559151 KIAA0753Q2KHM9 967 aa13.94□□□□□ -0.18
CASC4-208ENST00000559151 CNKSR3Q6P9H4 555 aa13.94□□□□□ -0.18
CASC4-208ENST00000559151 TTC7BQ86TV6 843 aa13.94□□□□□ -0.18
CASC4-208ENST00000559151 Q8N3U1 123 aa13.94□□□□□ -0.18
CASC4-208ENST00000559151 PWWP2AQ96N64 755 aa13.94□□□□□ -0.18
CASC4-208ENST00000559151 KIAA1683Q9H0B3 1180 aa13.94□□□□□ -0.18
CASC4-208ENST00000559151 COMMD10Q9Y6G5 202 aa13.94□□□□□ -0.18
CASC4-208ENST00000559151 MEOX1P50221 254 aa13.93□□□□□ -0.18
CASC4-208ENST00000559151 RRADP55042 308 aa13.93□□□□□ -0.18
CASC4-208ENST00000559151 SESN2P58004 480 aaPredicted RBP13.93□□□□□ -0.18
CASC4-208ENST00000559151 C19orf54Q5BKX5 351 aa13.93□□□□□ -0.18
CASC4-208ENST00000559151 Q6ZUG5 572 aa13.93□□□□□ -0.18
CASC4-208ENST00000559151 SAPCD2Q86UD0 394 aa13.93□□□□□ -0.18
CASC4-208ENST00000559151 COL23A1Q86Y22 540 aaPredicted RBP13.93□□□□□ -0.18
CASC4-208ENST00000559151 KLHDC4Q8TBB5 520 aa13.93□□□□□ -0.18
CASC4-208ENST00000559151 ZNF526Q8TF50 670 aaPredicted RBP13.93□□□□□ -0.18
CASC4-208ENST00000559151 YTHDC1Q96MU7 727 aaKnown RBP13.93□□□□□ -0.18
CASC4-208ENST00000559151 TDP1Q9NUW8 608 aa13.93□□□□□ -0.18
CASC4-208ENST00000559151 PCDHGB6Q9Y5F9 930 aa13.93□□□□□ -0.18
CASC4-208ENST00000559151 MRE11P49959 708 aa13.92□□□□□ -0.18
CASC4-208ENST00000559151 AGFG1P52594 562 aaKnown RBP13.92□□□□□ -0.18
CASC4-208ENST00000559151 ANO6Q4KMQ2 910 aa13.92□□□□□ -0.18
CASC4-208ENST00000559151 VWA3BQ502W6 1294 aa13.92□□□□□ -0.18
CASC4-208ENST00000559151 DAAM2Q86T65 1068 aa13.92□□□□□ -0.18
CASC4-208ENST00000559151 ZNF480Q8WV37 535 aa13.92□□□□□ -0.18
CASC4-208ENST00000559151 KATNBL1Q9H079 304 aa13.92□□□□□ -0.18
CASC4-208ENST00000559151 BHMT2Q9H2M3 363 aa13.92□□□□□ -0.18
CASC4-208ENST00000559151 FAM184BQ9ULE4 1060 aa13.92□□□□□ -0.18
CASC4-208ENST00000559151 L1RE1Q9UN81 338 aa13.92□□□□□ -0.18
CASC4-208ENST00000559151 C2orf78A6NCI8 922 aa13.91□□□□□ -0.18
CASC4-208ENST00000559151 SGTAO43765 313 aa13.91□□□□□ -0.18
CASC4-208ENST00000559151 ALDH1A2O94788 518 aa13.91□□□□□ -0.18
CASC4-208ENST00000559151 RPLP2P05387 115 aaKnown RBP13.91□□□□□ -0.18
CASC4-208ENST00000559151 MYL3P08590 195 aa13.91□□□□□ -0.18
CASC4-208ENST00000559151 GLDCP23378 1020 aa13.91□□□□□ -0.18
CASC4-208ENST00000559151 IL12RB1P42701 662 aa13.91□□□□□ -0.18
CASC4-208ENST00000559151 FAM193AP78312 1265 aa13.91□□□□□ -0.18
CASC4-208ENST00000559151 CDC42EP1Q00587 391 aa13.91□□□□□ -0.18
CASC4-208ENST00000559151 TARDBPQ13148 414 aaKnown RBP eCLIP13.91□□□□□ -0.18
CASC4-208ENST00000559151 CCDC157Q569K6 752 aa13.91□□□□□ -0.18
CASC4-208ENST00000559151 GJC2Q5T442 439 aaPredicted RBP13.91□□□□□ -0.18
CASC4-208ENST00000559151 SWSAP1Q6NVH7 229 aa13.91□□□□□ -0.18
CASC4-208ENST00000559151 EXOC8Q8IYI6 725 aa13.91□□□□□ -0.18
CASC4-208ENST00000559151 PARD3BQ8TEW8 1205 aa13.91□□□□□ -0.18
CASC4-208ENST00000559151 CLPTM1LQ96KA5 538 aa13.91□□□□□ -0.18
CASC4-208ENST00000559151 PDCD2LQ9BRP1 358 aa13.91□□□□□ -0.18
CASC4-208ENST00000559151 ING3Q9NXR8 418 aa13.91□□□□□ -0.18
CASC4-208ENST00000559151 CAPN8A6NHC0 703 aa13.9□□□□□ -0.18
CASC4-208ENST00000559151 SYN1P17600 705 aa13.9□□□□□ -0.18
CASC4-208ENST00000559151 THEMIS2Q5TEJ8 643 aa13.9□□□□□ -0.18
CASC4-208ENST00000559151 SYDE1Q6ZW31 735 aaPredicted RBP13.9□□□□□ -0.18
CASC4-208ENST00000559151 REXO1L1PQ8IX06 675 aa13.9□□□□□ -0.18
CASC4-208ENST00000559151 PLA2G15Q8NCC3 412 aa13.9□□□□□ -0.18
CASC4-208ENST00000559151 CCHCR1Q8TD31 782 aa13.9□□□□□ -0.18
CASC4-208ENST00000559151 DMRTA2Q96SC8 542 aa13.9□□□□□ -0.18
CASC4-208ENST00000559151 STRBPQ96SI9 672 aaKnown RBP13.9□□□□□ -0.18
CASC4-208ENST00000559151 MANSC1Q9H8J5 431 aa13.9□□□□□ -0.18
CASC4-208ENST00000559151 CTDP1Q9Y5B0 961 aaPredicted RBP13.9□□□□□ -0.18
CASC4-208ENST00000559151 RBM8AQ9Y5S9 174 aaKnown RBP13.9□□□□□ -0.18
CASC4-208ENST00000559151 LDHAP00338 332 aaKnown RBP13.89□□□□□ -0.19
CASC4-208ENST00000559151 ZNF888P0CJ79 500 aaPredicted RBP13.89□□□□□ -0.19
CASC4-208ENST00000559151 SLC5A1P13866 664 aa13.89□□□□□ -0.19
CASC4-208ENST00000559151 PER3P56645 1201 aa13.89□□□□□ -0.19
CASC4-208ENST00000559151 NOGQ13253 232 aa13.89□□□□□ -0.19
CASC4-208ENST00000559151 SEMA5AQ13591 1074 aa13.89□□□□□ -0.19
CASC4-208ENST00000559151 CNN3Q15417 329 aaKnown RBP13.89□□□□□ -0.19
CASC4-208ENST00000559151 DARS2Q6PI48 645 aaKnown RBP13.89□□□□□ -0.19
CASC4-208ENST00000559151 GPR155Q7Z3F1 870 aa13.89□□□□□ -0.19
CASC4-208ENST00000559151 CERS3Q8IU89 383 aa13.89□□□□□ -0.19
CASC4-208ENST00000559151 PQLC1Q8N2U9 271 aa13.89□□□□□ -0.19
CASC4-208ENST00000559151 PLBD2Q8NHP8 589 aa13.89□□□□□ -0.19
CASC4-208ENST00000559151 AJUBAQ96IF1 538 aa13.89□□□□□ -0.19
CASC4-208ENST00000559151 UHRF1Q96T88 793 aaPredicted RBP13.89□□□□□ -0.19
CASC4-208ENST00000559151 CARD11Q9BXL7 1154 aa13.89□□□□□ -0.19
CASC4-208ENST00000559151 MYH16Q9H6N6 1097 aa13.89□□□□□ -0.19
CASC4-208ENST00000559151 NTMQ9P121 344 aa13.89□□□□□ -0.19
CASC4-208ENST00000559151 TRPS1Q9UHF7 1281 aa13.89□□□□□ -0.19
CASC4-208ENST00000559151 PHTF1Q9UMS5 762 aa13.89□□□□□ -0.19
CASC4-208ENST00000559151 SLC16A6O15403 523 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms