RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 MROH7Q68CQ1 1323 aa8.54□□□□□ -1.04
SPG11-213ENST00000558988 TIMP1P01033 207 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 PARP1P09874 1014 aaKnown RBP8.53□□□□□ -1.04
SPG11-213ENST00000558988 GSPT1P15170 499 aaKnown RBP8.53□□□□□ -1.04
SPG11-213ENST00000558988 NOVP48745 357 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 CCL23P55773 120 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 RPS6P62753 249 aaKnown RBP8.53□□□□□ -1.04
SPG11-213ENST00000558988 ITGA7Q13683 1181 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 QRICH1Q2TAL8 776 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 GPATCH4Q5T3I0 446 aaKnown RBP8.53□□□□□ -1.04
SPG11-213ENST00000558988 IFIT1BQ5T764 474 aaKnown RBP8.53□□□□□ -1.04
SPG11-213ENST00000558988 TTC22Q5TAA0 569 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 ERICH6BQ5W0A0 696 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 IQSEC1Q6DN90 963 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 TAPT1Q6NXT6 567 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 CHST3Q7LGC8 479 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 DGKHQ86XP1 1220 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 FAM126BQ8IXS8 530 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 ADGRF4Q8IZF3 695 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 ENAHQ8N8S7 591 aaPredicted RBP8.53□□□□□ -1.04
SPG11-213ENST00000558988 CLEC4DQ8WXI8 215 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 PIBF1Q8WXW3 757 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 COPS5Q92905 334 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 TTC14Q96N46 770 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 DSCC1Q9BVC3 393 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 KRT23Q9C075 422 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 TRPV6Q9H1D0 765 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 HIPK3Q9H422 1215 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 SLAMF8Q9P0V8 285 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 ZSWIM5Q9P217 1185 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 TBX21Q9UL17 535 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 STXBP5LQ9Y2K9 1186 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 KCTD3Q9Y597 815 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 UMODL1Q5DID0 1318 aa8.53□□□□□ -1.04
SPG11-213ENST00000558988 GRXCR1A8MXD5 290 aa8.52□□□□□ -1.05
SPG11-213ENST00000558988 SORBS3O60504 671 aa8.52□□□□□ -1.05
SPG11-213ENST00000558988 TRDNQ13061 729 aa8.52□□□□□ -1.05
SPG11-213ENST00000558988 PPIGQ13427 754 aaKnown RBP eCLIP8.52□□□□□ -1.05
SPG11-213ENST00000558988 PUM1Q14671 1186 aaKnown RBP eCLIP8.52□□□□□ -1.05
SPG11-213ENST00000558988 PPP2R5BQ15173 497 aa8.52□□□□□ -1.05
SPG11-213ENST00000558988 ASPRV1Q53RT3 343 aa8.52□□□□□ -1.05
SPG11-213ENST00000558988 ZNF385BQ569K4 471 aa8.52□□□□□ -1.05
SPG11-213ENST00000558988 CCDC178Q5BJE1 867 aa8.52□□□□□ -1.05
SPG11-213ENST00000558988 FAM109BQ6ICB4 259 aaPredicted RBP8.52□□□□□ -1.05
SPG11-213ENST00000558988 SEPT14Q6ZU15 432 aa8.52□□□□□ -1.05
SPG11-213ENST00000558988 ZNF365Q70YC5 407 aa8.52□□□□□ -1.05
SPG11-213ENST00000558988 TICAM2Q86XR7 235 aa8.52□□□□□ -1.05
SPG11-213ENST00000558988 HOMER1Q86YM7 354 aa8.52□□□□□ -1.05
SPG11-213ENST00000558988 TMEM199Q8N511 208 aa8.52□□□□□ -1.05
SPG11-213ENST00000558988 RUFY2Q8WXA3 655 aa8.52□□□□□ -1.05
SPG11-213ENST00000558988 MYLIPQ8WY64 445 aa8.52□□□□□ -1.05
SPG11-213ENST00000558988 TBC1D5Q92609 795 aa8.52□□□□□ -1.05
SPG11-213ENST00000558988 MPHOSPH6Q99547 160 aaKnown RBP8.52□□□□□ -1.05
SPG11-213ENST00000558988 CDX2Q99626 313 aaPredicted RBP8.52□□□□□ -1.05
SPG11-213ENST00000558988 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.52□□□□□ -1.05
SPG11-213ENST00000558988 CNNM2Q9H8M5 875 aa8.52□□□□□ -1.05
SPG11-213ENST00000558988 MYH6P13533 1939 aa8.52□□□□□ -1.05
SPG11-213ENST00000558988 WDR19Q8NEZ3 1342 aa8.52□□□□□ -1.05
SPG11-213ENST00000558988 B4DLN1 442 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 B4GALT4O60513 344 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 CABYRO75952 493 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 EOMESO95936 686 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 CFBP00751 764 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 SNHG28P0DPA3 235 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 TXNP10599 105 aaKnown RBP8.51□□□□□ -1.05
SPG11-213ENST00000558988 CYP2C9P11712 490 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 FOSL2P15408 326 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 CDK7P50613 346 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 MRPL12P52815 198 aaKnown RBP8.51□□□□□ -1.05
SPG11-213ENST00000558988 PTH1RQ03431 593 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 ELOAQ14241 798 aaKnown RBP8.51□□□□□ -1.05
SPG11-213ENST00000558988 DUSP28Q4G0W2 176 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 CDKAL1Q5VV42 579 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 MFSD5Q6N075 450 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 CYB5R4Q7L1T6 521 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 OTOP2Q7RTS6 562 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 RALYLQ86SE5 291 aaKnown RBP8.51□□□□□ -1.05
SPG11-213ENST00000558988 HELQQ8TDG4 1101 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 SCLYQ96I15 445 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 TAAR1Q96RJ0 339 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 FOXQ1Q9C009 403 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 TTYH1Q9H313 450 aaPredicted RBP8.51□□□□□ -1.05
SPG11-213ENST00000558988 TRMT13Q9NUP7 481 aaKnown RBP8.51□□□□□ -1.05
SPG11-213ENST00000558988 PNMA2Q9UL42 364 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 GRIN2DO15399 1336 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 ABCB11O95342 1321 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 RAD50Q92878 1312 aa8.51□□□□□ -1.05
SPG11-213ENST00000558988 MYOCOSA0A1B0GUC4 107 aa8.5□□□□□ -1.05
SPG11-213ENST00000558988 ERICH2A1L162 156 aa8.5□□□□□ -1.05
SPG11-213ENST00000558988 KLRF2D3W0D1 207 aa8.5□□□□□ -1.05
SPG11-213ENST00000558988 OVOL3O00110 214 aa8.5□□□□□ -1.05
SPG11-213ENST00000558988 IFIT3O14879 490 aaKnown RBP8.5□□□□□ -1.05
SPG11-213ENST00000558988 CD4P01730 458 aa8.5□□□□□ -1.05
SPG11-213ENST00000558988 MYCLP12524 364 aaPredicted RBP8.5□□□□□ -1.05
SPG11-213ENST00000558988 ITPKAP23677 461 aa8.5□□□□□ -1.05
SPG11-213ENST00000558988 CHMLP26374 656 aa8.5□□□□□ -1.05
SPG11-213ENST00000558988 HOXA13P31271 388 aaPredicted RBP8.5□□□□□ -1.05
SPG11-213ENST00000558988 CPT1AP50416 773 aa8.5□□□□□ -1.05
SPG11-213ENST00000558988 SMAD3P84022 425 aaKnown RBP8.5□□□□□ -1.05
SPG11-213ENST00000558988 LY6KQ17RY6 165 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms