RNA–Protein interactions for RNA: ENST00000558961.1

BMP4-204, Transcript of bone morphogenetic protein 4, humanhuman

TSL 3

Gene BMP4, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4-204ENST00000558961 VWA3AA6NCI4 1184 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 H3BQ06 376 aaPredicted RBP12.41□□□□□ -0.42
BMP4-204ENST00000558961 LINC01565O15544 149 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 DDHD2O94830 711 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 EDN1P05305 212 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 GALTP07902 379 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 ITGA4P13612 1032 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 GUCY2CP25092 1073 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 NRIP1P48552 1158 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 AFF1P51825 1210 aaKnown RBP12.41□□□□□ -0.42
BMP4-204ENST00000558961 EFNA5P52803 228 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 DSC1Q08554 894 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 RESTQ13127 1097 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 MAPK6Q16659 721 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 DUSP6Q16828 381 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 LONRF3Q496Y0 759 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 TMEM119Q4V9L6 283 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 PTCRAQ6ISU1 281 aaPredicted RBP12.41□□□□□ -0.42
BMP4-204ENST00000558961 C1orf186Q6ZWK4 172 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 BCL7CQ8WUZ0 217 aaPredicted RBP12.41□□□□□ -0.42
BMP4-204ENST00000558961 NECAB3Q96P71 396 aaPredicted RBP12.41□□□□□ -0.42
BMP4-204ENST00000558961 PNMA5Q96PV4 448 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 TCF25Q9BQ70 676 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 TMEM175Q9BSA9 504 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 TIPINQ9BVW5 301 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 NXF3Q9H4D5 531 aaKnown RBP12.41□□□□□ -0.42
BMP4-204ENST00000558961 C17orf75Q9HAS0 396 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 KCND2Q9NZV8 630 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 DNAJB4Q9UDY4 337 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 INPP5FQ9Y2H2 1132 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 GIT1Q9Y2X7 761 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 IRAK3Q9Y616 596 aa12.41□□□□□ -0.42
BMP4-204ENST00000558961 MORC2Q9Y6X9 1032 aaPredicted RBP12.41□□□□□ -0.42
BMP4-204ENST00000558961 PHLPP2Q6ZVD8 1323 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 VPS37CA5D8V6 355 aaPredicted RBP12.4□□□□□ -0.42
BMP4-204ENST00000558961 ARL5CA6NH57 179 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 TTLL13PA6NNM8 815 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 ACKR2O00590 384 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 N4BP3O15049 544 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 STX6O43752 255 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 CSPG5O95196 566 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 PRKCBP05771 671 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 IL9P15248 144 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 MLH1P40692 756 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 SLC11A1P49279 550 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 SLC12A3P55017 1021 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 RNASELQ05823 741 aaKnown RBP12.4□□□□□ -0.42
BMP4-204ENST00000558961 SF3A1Q15459 793 aaKnown RBP12.4□□□□□ -0.42
BMP4-204ENST00000558961 NFKBIBQ15653 356 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 RINT1Q6NUQ1 792 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 TMEM184AQ6ZMB5 413 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 DDX53Q86TM3 631 aaKnown RBP12.4□□□□□ -0.42
BMP4-204ENST00000558961 ZNF280BQ86YH2 543 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 FAM178BQ8IXR5 827 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 HACE1Q8IYU2 909 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 SYT2Q8N9I0 419 aaPredicted RBP12.4□□□□□ -0.42
BMP4-204ENST00000558961 SMRP1Q8NCR6 262 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 GSTCDQ8NEC7 633 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 DEPTORQ8TB45 409 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 KCNN1Q92952 543 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 TMEM169Q96HH4 297 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 IGSF21Q96ID5 467 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 IFT74Q96LB3 600 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 DRC1Q96MC2 740 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 RUSC1Q9BVN2 902 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 TRIM6Q9C030 488 aaPredicted RBP12.4□□□□□ -0.42
BMP4-204ENST00000558961 ZBP1Q9H171 429 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 RNF39Q9H2S5 420 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 PDZD7Q9H5P4 517 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 ENTPD7Q9NQZ7 604 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 CLEC1BQ9P126 229 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 ARHGAP28Q9P2N2 729 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 STK39Q9UEW8 545 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 FAM50BQ9Y247 325 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 HES2Q9Y543 173 aa12.4□□□□□ -0.42
BMP4-204ENST00000558961 PDCD11Q14690 1871 aaKnown RBP12.4□□□□□ -0.42
BMP4-204ENST00000558961 BDP1A6H8Y1 2624 aa12.39□□□□□ -0.43
BMP4-204ENST00000558961 NT5C1B-RDH14C9J2C7 533 aa12.39□□□□□ -0.43
BMP4-204ENST00000558961 MBTPS2O43462 519 aa12.39□□□□□ -0.43
BMP4-204ENST00000558961 HIP1RO75146 1068 aa12.39□□□□□ -0.43
BMP4-204ENST00000558961 NPTXRO95502 500 aa12.39□□□□□ -0.43
BMP4-204ENST00000558961 EFEMP2O95967 443 aa12.39□□□□□ -0.43
BMP4-204ENST00000558961 ZSCAN22P10073 491 aaPredicted RBP12.39□□□□□ -0.43
BMP4-204ENST00000558961 LONP1P36776 959 aaKnown RBP12.39□□□□□ -0.43
BMP4-204ENST00000558961 NPTX2P47972 431 aa12.39□□□□□ -0.43
BMP4-204ENST00000558961 NDUFV1P49821 464 aa12.39□□□□□ -0.43
BMP4-204ENST00000558961 COASYQ13057 564 aa12.39□□□□□ -0.43
BMP4-204ENST00000558961 SMAD4Q13485 552 aaKnown RBP12.39□□□□□ -0.43
BMP4-204ENST00000558961 PRPF4BQ13523 1007 aaKnown RBP12.39□□□□□ -0.43
BMP4-204ENST00000558961 SMC1AQ14683 1233 aaKnown RBP12.39□□□□□ -0.43
BMP4-204ENST00000558961 PTPAQ15257 358 aa12.39□□□□□ -0.43
BMP4-204ENST00000558961 SMAD2Q15796 467 aaKnown RBP12.39□□□□□ -0.43
BMP4-204ENST00000558961 PLPP4Q5VZY2 271 aa12.39□□□□□ -0.43
BMP4-204ENST00000558961 CDR2LQ86X02 465 aaPredicted RBP12.39□□□□□ -0.43
BMP4-204ENST00000558961 COLGALT2Q8IYK4 626 aa12.39□□□□□ -0.43
BMP4-204ENST00000558961 RNF168Q8IYW5 571 aaPredicted RBP12.39□□□□□ -0.43
BMP4-204ENST00000558961 MRPL43Q8N983 215 aaKnown RBP12.39□□□□□ -0.43
BMP4-204ENST00000558961 VN1R2Q8NFZ6 395 aa12.39□□□□□ -0.43
BMP4-204ENST00000558961 ZFP42Q96MM3 310 aa12.39□□□□□ -0.43
BMP4-204ENST00000558961 GAD1Q99259 594 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms