RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 APEX2Q9UBZ4 518 aa11.71□□□□□ -0.53
CSPG4P5-201ENST00000558731 CLDN3O15551 220 aa11.71□□□□□ -0.54
CSPG4P5-201ENST00000558731 GHRHRQ02643 423 aa11.71□□□□□ -0.54
CSPG4P5-201ENST00000558731 USP37Q86T82 979 aa11.71□□□□□ -0.54
CSPG4P5-201ENST00000558731 DYNC1LI2O43237 492 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 PALMO75781 387 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 SEC31AO94979 1220 aaKnown RBP11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 PIK3CAP42336 1068 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 NLRP11P59045 1033 aaKnown RBP11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 PPP2R5AQ15172 486 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 ZNF394Q53GI3 561 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 ZBTB41Q5SVQ8 909 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 ZBTB8OSQ8IWT0 167 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 GPD1LQ8N335 351 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 TAF4BQ92750 862 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 TMEM117Q9H0C3 514 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 KCND1Q9NSA2 647 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 SUCLA2Q9P2R7 463 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 NFASCO94856 1347 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 COL11A1P12107 1806 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 ASB14A6NK59 587 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 TFAMQ00059 246 aaKnown RBP11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 HGSNATQ68CP4 663 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 SPOPLQ6IQ16 392 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 PHLDB3Q6NSJ2 640 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 EFCAB12Q6NXP0 572 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 TMCO3Q6UWJ1 677 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 PCYT2Q99447 389 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 SENP7Q9BQF6 1050 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 MKNK1Q9BUB5 465 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 L2HGDHQ9H9P8 463 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 PLCB1Q9NQ66 1216 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 RBAKQ9NYW8 714 aaPredicted RBP11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 CYP26A1O43174 497 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 UBE4BO95155 1302 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 VTNP04004 478 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 CDR1P51861 262 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 MARSP56192 900 aaKnown RBP11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 GPS2Q13227 327 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 SLC18A3Q16572 532 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 CELF3Q5SZQ8 465 aaKnown RBP11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 ZFYVE27Q5T4F4 411 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 LDLRAD1Q5T700 205 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 SCARA5Q6ZMJ2 495 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 MAP4K3Q8IVH8 894 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 CEP112Q8N8E3 955 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 TRIM58Q8NG06 486 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 PLEKHO2Q8TD55 490 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 SALL4Q9UJQ4 1053 aa11.7□□□□□ -0.54
CSPG4P5-201ENST00000558731 DOCK5Q9H7D0 1870 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 H2AFZP0C0S5 128 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 MAPTP10636 758 aaKnown RBP11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 CD58P19256 250 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 SOX5P35711 763 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 NCKAP1LP55160 1127 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 WDR44Q5JSH3 913 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 H2AFVQ71UI9 128 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 ADAT2Q7Z6V5 191 aaKnown RBP11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 TXLNBQ8N3L3 684 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 SLC20A1Q8WUM9 679 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 NT5C1BQ96P26 610 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 PARK7Q99497 189 aaKnown RBP11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 GPR20Q99678 358 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 RNPEPQ9H4A4 650 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 PPP1R37O75864 691 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 FERP16591 822 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 CYP2C19P33261 490 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 C2orf54Q08AI8 447 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 CAPSQ13938 189 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 MAPK6Q16659 721 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 C2CD6Q53TS8 623 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 KRT39Q6A163 491 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 GPR142Q7Z601 462 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 NLRP7Q8WX94 980 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 CTNNBL1Q8WYA6 563 aaPredicted RBP11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 F8VZ95 297 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 ATMINO43313 823 aaPredicted RBP11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 SSR1P43307 286 aaKnown RBP11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 SRGAP1Q7Z6B7 1085 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 DAAM2Q86T65 1068 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 TIPINQ9BVW5 301 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 C1orf112Q9NSG2 853 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 RNF19AQ9NV58 838 aa11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 MAFBQ9Y5Q3 323 aaPredicted RBP11.69□□□□□ -0.54
CSPG4P5-201ENST00000558731 TTLL13PA6NNM8 815 aa11.68□□□□□ -0.54
CSPG4P5-201ENST00000558731 LRRIQ3A6PVS8 624 aaPredicted RBP11.68□□□□□ -0.54
CSPG4P5-201ENST00000558731 TADA3O75528 432 aa11.68□□□□□ -0.54
CSPG4P5-201ENST00000558731 TGFB3P10600 412 aa11.68□□□□□ -0.54
CSPG4P5-201ENST00000558731 FGFR4P22455 802 aa11.68□□□□□ -0.54
CSPG4P5-201ENST00000558731 PAFAH1B1P43034 410 aa11.68□□□□□ -0.54
CSPG4P5-201ENST00000558731 SV2AQ7L0J3 742 aa11.68□□□□□ -0.54
CSPG4P5-201ENST00000558731 TATDN2Q93075 761 aa11.68□□□□□ -0.54
CSPG4P5-201ENST00000558731 MS4A14Q96JA4 679 aa11.68□□□□□ -0.54
CSPG4P5-201ENST00000558731 MMS19Q96T76 1030 aa11.68□□□□□ -0.54
CSPG4P5-201ENST00000558731 CTTNBP2NLQ9P2B4 639 aa11.68□□□□□ -0.54
CSPG4P5-201ENST00000558731 PRKCBP05771 671 aa11.68□□□□□ -0.54
CSPG4P5-201ENST00000558731 CCDC172P0C7W6 258 aa11.68□□□□□ -0.54
CSPG4P5-201ENST00000558731 INSRRP14616 1297 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms