RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 ADCY2Q08462 1091 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 AADACL2Q6P093 401 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 ZNF662Q6ZS27 426 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 ARHGAP27Q6ZUM4 889 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 CTAGE3PQ8IX95 158 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 CAVIN3Q969G5 261 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 TAS2R14Q9NYV8 317 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 ALS2Q96Q42 1657 aa16.57■□□□□ 0.24
AP4E1-202ENST00000558439 CCND2P30279 289 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 ICE2Q659A1 982 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 RSAD2Q8WXG1 361 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 ARHGEF26Q96DR7 871 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 MSTO1Q9BUK6 570 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 FAM53CQ9NYF3 392 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 DISP2A7MBM2 1401 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 FAM187AA6NFU0 413 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 PI4K2BG5E9Z4 385 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 INO80B-WBP1J3KQ70 363 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 KRT1P04264 644 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 PLS3P13797 630 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 HSPA1LP34931 641 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 MAP2K2P36507 400 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 CIAPIN1Q6FI81 312 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 SCYL2Q6P3W7 929 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 TRIM7Q9C029 511 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 INO80BQ9C086 356 aaPredicted RBP16.56■□□□□ 0.24
AP4E1-202ENST00000558439 USP20Q9Y2K6 914 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 PSAPP07602 524 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 ZNF131P52739 623 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 MTMR2Q13614 643 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 LONRF1Q17RB8 773 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 CRY2Q49AN0 593 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 IRF2BP2Q7Z5L9 587 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 CERKQ8TCT0 537 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 ARHGEF2Q92974 986 aaKnown RBP16.56■□□□□ 0.24
AP4E1-202ENST00000558439 KAT5Q92993 513 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 ROBO3Q96MS0 1386 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 MARF1Q9Y4F3 1742 aaKnown RBP16.56■□□□□ 0.24
AP4E1-202ENST00000558439 GOLGA8MH3BSY2 632 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 RPS6P62753 249 aaKnown RBP16.56■□□□□ 0.24
AP4E1-202ENST00000558439 ACTRT1Q8TDG2 376 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 FAM151AQ8WW52 585 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 TRPC6Q9Y210 931 aa16.56■□□□□ 0.24
AP4E1-202ENST00000558439 WDR91A4D1P6 747 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 RGL2O15211 777 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 SUN1O94901 812 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 SNHG28P0DPA3 235 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 CHN1P15882 459 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 ATP2A2P16615 1042 aaKnown RBP16.55■□□□□ 0.24
AP4E1-202ENST00000558439 CNGA1P29973 690 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 KRT17Q04695 432 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 MTM1Q13496 603 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 PPP1R21Q6ZMI0 780 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 PALM2Q8IXS6 379 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 THNSL1Q8IYQ7 743 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 MYCBPAPQ8TBZ2 947 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 CHMP6Q96FZ7 201 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 WNT8AQ9H1J5 351 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 OLFML3Q9NRN5 406 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 TOPORSQ9NS56 1045 aaPredicted RBP16.55■□□□□ 0.24
AP4E1-202ENST00000558439 DUOX1Q9NRD9 1551 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 JAK3P52333 1124 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 KRT76Q01546 638 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 SNCBQ16143 134 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 RBM46Q8TBY0 533 aaKnown RBP16.55■□□□□ 0.24
AP4E1-202ENST00000558439 DHX38Q92620 1227 aaKnown RBP16.55■□□□□ 0.24
AP4E1-202ENST00000558439 CYFIP2Q96F07 1278 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 PCDHA10Q9Y5I2 948 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 ASTN1O14525 1302 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 MYCNP04198 464 aaPredicted RBP16.55■□□□□ 0.24
AP4E1-202ENST00000558439 MXRA7P84157 204 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 DHX34Q14147 1143 aaKnown RBP16.55■□□□□ 0.24
AP4E1-202ENST00000558439 DACT2Q5SW24 774 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 DCAF15Q66K64 600 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 ETNPPLQ8TBG4 499 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 TMEM143Q96AN5 459 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 CARD9Q9H257 536 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 RPAP3Q9H6T3 665 aaPredicted RBP16.55■□□□□ 0.24
AP4E1-202ENST00000558439 AS3MTQ9HBK9 375 aa16.55■□□□□ 0.24
AP4E1-202ENST00000558439 TUBGCP6Q96RT7 1819 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 DLG4P78352 724 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 NT5DC3Q86UY8 548 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 ATG4AQ8WYN0 398 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 GDF3Q9NR23 364 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 EXOC1LA0A1B0GW35 172 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 GUCY2CP25092 1073 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 DNAJC24Q6P3W2 148 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 KDM7AQ6ZMT4 941 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 RTKN2Q8IZC4 609 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 SLC17A8Q8NDX2 589 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 C9orf72Q96LT7 481 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 INPP4AQ96PE3 977 aaPredicted RBP16.54■□□□□ 0.24
AP4E1-202ENST00000558439 MPHOSPH6Q99547 160 aaKnown RBP16.54■□□□□ 0.24
AP4E1-202ENST00000558439 RIT2Q99578 217 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 PRMT1Q99873 361 aaKnown RBP16.54■□□□□ 0.24
AP4E1-202ENST00000558439 WDR18Q9BV38 432 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 MRPL47Q9HD33 250 aaKnown RBP16.54■□□□□ 0.24
AP4E1-202ENST00000558439 PRM3Q9NNZ6 103 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 MYH8P13535 1937 aa16.54■□□□□ 0.24
AP4E1-202ENST00000558439 ZNF142P52746 1687 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms