RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 IFT122Q9HBG6 1241 aa5.91□□□□□ -1.46
GABPB1-207ENST00000558335 DMAP1Q9NPF5 467 aaPredicted RBP5.91□□□□□ -1.46
GABPB1-207ENST00000558335 RBM12Q9NTZ6 932 aaKnown RBP5.91□□□□□ -1.46
GABPB1-207ENST00000558335 COMMD8Q9NX08 183 aa5.91□□□□□ -1.46
GABPB1-207ENST00000558335 PI4KBQ9UBF8 816 aa5.91□□□□□ -1.46
GABPB1-207ENST00000558335 CTNNAL1Q9UBT7 734 aa5.91□□□□□ -1.46
GABPB1-207ENST00000558335 TRIM10Q9UDY6 481 aa5.91□□□□□ -1.46
GABPB1-207ENST00000558335 TUBGCP4Q9UGJ1 667 aa5.91□□□□□ -1.46
GABPB1-207ENST00000558335 DDX20Q9UHI6 824 aaKnown RBP5.91□□□□□ -1.46
GABPB1-207ENST00000558335 SAP30BPQ9UHR5 308 aaKnown RBP5.91□□□□□ -1.46
GABPB1-207ENST00000558335 CNOT7Q9UIV1 285 aaKnown RBP5.91□□□□□ -1.46
GABPB1-207ENST00000558335 TMEM59LQ9UK28 342 aa5.91□□□□□ -1.46
GABPB1-207ENST00000558335 FBXO9Q9UK97 447 aaPredicted RBP5.91□□□□□ -1.46
GABPB1-207ENST00000558335 TRPC6Q9Y210 931 aa5.91□□□□□ -1.46
GABPB1-207ENST00000558335 PCDHA1Q9Y5I3 950 aa5.91□□□□□ -1.46
GABPB1-207ENST00000558335 SLC30A1Q9Y6M5 507 aa5.91□□□□□ -1.46
GABPB1-207ENST00000558335 SLC4A7Q9Y6M7 1214 aa5.91□□□□□ -1.46
GABPB1-207ENST00000558335 TAF1P21675 1872 aa5.91□□□□□ -1.46
GABPB1-207ENST00000558335 ARFGEF1Q9Y6D6 1849 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 BAZ2BQ9UIF8 2168 aaKnown RBP5.9□□□□□ -1.46
GABPB1-207ENST00000558335 RCCD1A6NED2 376 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 AGPSO00116 658 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 PDE2AO00408 941 aaPredicted RBP5.9□□□□□ -1.46
GABPB1-207ENST00000558335 ZNF263O14978 683 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 ZNF185O15231 689 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 PMM2O15305 246 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 SLC37A4O43826 429 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 DKC1O60832 514 aaKnown RBP eCLIP5.9□□□□□ -1.46
GABPB1-207ENST00000558335 PARNO95453 639 aaKnown RBP5.9□□□□□ -1.46
GABPB1-207ENST00000558335 TDP2O95551 362 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 NR3C1P04150 777 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 PAEPP09466 180 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 GOLGA8HP0CJ92 632 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 MYBP10242 640 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 POLR2EP19388 210 aaKnown RBP5.9□□□□□ -1.46
GABPB1-207ENST00000558335 BDNFP23560 247 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 ALDH3A1P30838 453 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 CHRNA3P32297 505 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 LSP1P33241 339 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 SREBF1P36956 1147 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 CETN2P41208 172 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 MATR3P43243 847 aaKnown RBP eCLIP5.9□□□□□ -1.46
GABPB1-207ENST00000558335 CCT5P48643 541 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 ATN1P54259 1190 aaPredicted RBP5.9□□□□□ -1.46
GABPB1-207ENST00000558335 SLC12A3P55017 1021 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 PPP2R2AP63151 447 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 ARHGAP4P98171 946 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 KCNMA1Q12791 1236 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 MYBPC3Q14896 1274 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 DIXDC1Q155Q3 683 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 SGSM1Q2NKQ1 1148 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 GNPTABQ3T906 1256 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 C6orf118Q5T5N4 469 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 GKAP1Q5VSY0 366 aaPredicted RBP5.9□□□□□ -1.46
GABPB1-207ENST00000558335 DPP8Q6V1X1 898 aaPredicted RBP5.9□□□□□ -1.46
GABPB1-207ENST00000558335 C3orf67Q6ZVT6 689 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 INTS8Q75QN2 995 aaKnown RBP5.9□□□□□ -1.46
GABPB1-207ENST00000558335 ENOSF1Q7L5Y1 443 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 EPM2AIP1Q7L775 607 aaPredicted RBP5.9□□□□□ -1.46
GABPB1-207ENST00000558335 PODNQ7Z5L7 613 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 FBXO11Q86XK2 927 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 PDCD7Q8N8D1 485 aaKnown RBP5.9□□□□□ -1.46
GABPB1-207ENST00000558335 BBOF1Q8ND07 529 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 TBC1D16Q8TBP0 767 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 CHURC1Q8WUH1 139 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 SPIRE2Q8WWL2 714 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 SEC14L1Q92503 715 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 ATP6V0A1Q93050 837 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 HVCN1Q96D96 273 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 ZIM3Q96PE6 472 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 TRAPPC9Q96Q05 1148 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 RPS6KC1Q96S38 1066 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 KRT12Q99456 494 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 FOXP3Q9BZS1 431 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 ROPN1BQ9BZX4 212 aaPredicted RBP5.9□□□□□ -1.46
GABPB1-207ENST00000558335 FAM192AQ9GZU8 254 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 MIS12Q9H081 205 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 GANQ9H2C0 597 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 VCXQ9H320 206 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 SUGCTQ9HAC7 445 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 MLXIPQ9HAP2 919 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 ROPN1Q9HAT0 212 aaPredicted RBP5.9□□□□□ -1.46
GABPB1-207ENST00000558335 PARVGQ9HBI0 331 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 NLRC4Q9NPP4 1024 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 MAP3K20Q9NYL2 800 aaKnown RBP5.9□□□□□ -1.46
GABPB1-207ENST00000558335 TBC1D7Q9P0N9 293 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 SCHIP1Q9P0W5 487 aaPredicted RBP5.9□□□□□ -1.46
GABPB1-207ENST00000558335 TCEAL9Q9UHQ7 104 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 NAGPAQ9UK23 515 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 EXOC7Q9UPT5 735 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 DAGLAQ9Y4D2 1042 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 PCDHA2Q9Y5H9 948 aa5.9□□□□□ -1.46
GABPB1-207ENST00000558335 NCANO14594 1321 aa5.9□□□□□ -1.47
GABPB1-207ENST00000558335 THSD7AQ9UPZ6 1657 aa5.89□□□□□ -1.47
GABPB1-207ENST00000558335 A0A0U1RQJ8 604 aa5.89□□□□□ -1.47
GABPB1-207ENST00000558335 KLRG2A4D1S0 409 aaPredicted RBP5.89□□□□□ -1.47
GABPB1-207ENST00000558335 CFAP69A5D8W1 941 aa5.89□□□□□ -1.47
GABPB1-207ENST00000558335 GMNCA6NCL1 334 aa5.89□□□□□ -1.47
GABPB1-207ENST00000558335 POTEMA6NI47 508 aa5.89□□□□□ -1.47
GABPB1-207ENST00000558335 TRIM64CA6NLI5 447 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms