RNA–Protein interactions for RNA: ENST00000558271.5

LRRC49-209, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-209ENST00000558271 MPLP40238 635 aa4.38□□□□□ -1.71
LRRC49-209ENST00000558271 RNASE9P60153 205 aaKnown RBP4.38□□□□□ -1.71
LRRC49-209ENST00000558271 NHLH2Q02577 135 aa4.38□□□□□ -1.71
LRRC49-209ENST00000558271 BTNL9Q6UXG8 535 aa4.38□□□□□ -1.71
LRRC49-209ENST00000558271 MICALCLQ6ZW33 695 aa4.38□□□□□ -1.71
LRRC49-209ENST00000558271 TAS1R1Q7RTX1 841 aa4.38□□□□□ -1.71
LRRC49-209ENST00000558271 PLXDC1Q8IUK5 500 aa4.38□□□□□ -1.71
LRRC49-209ENST00000558271 SYT12Q8IV01 421 aa4.38□□□□□ -1.71
LRRC49-209ENST00000558271 C7orf31Q8N865 590 aa4.38□□□□□ -1.71
LRRC49-209ENST00000558271 ANKS1AQ92625 1134 aa4.38□□□□□ -1.71
LRRC49-209ENST00000558271 DEPDC7Q96QD5 511 aa4.38□□□□□ -1.71
LRRC49-209ENST00000558271 DNAJC7Q99615 494 aa4.38□□□□□ -1.71
LRRC49-209ENST00000558271 TEX101Q9BY14 249 aa4.38□□□□□ -1.71
LRRC49-209ENST00000558271 NCOA5Q9HCD5 579 aaKnown RBP4.38□□□□□ -1.71
LRRC49-209ENST00000558271 B4GALT6Q9UBX8 382 aa4.38□□□□□ -1.71
LRRC49-209ENST00000558271 TESQ9UGI8 421 aaKnown RBP4.38□□□□□ -1.71
LRRC49-209ENST00000558271 COL3A1P02461 1466 aaPredicted RBP4.37□□□□□ -1.71
LRRC49-209ENST00000558271 PRR5-ARHGAP8B1AHC4 643 aa4.37□□□□□ -1.71
LRRC49-209ENST00000558271 APOL3O95236 402 aa4.37□□□□□ -1.71
LRRC49-209ENST00000558271 LY86O95711 162 aa4.37□□□□□ -1.71
LRRC49-209ENST00000558271 C1RP00736 705 aa4.37□□□□□ -1.71
LRRC49-209ENST00000558271 EGR2P11161 476 aaPredicted RBP4.37□□□□□ -1.71
LRRC49-209ENST00000558271 GTF2F1P35269 517 aaKnown RBP eCLIP4.37□□□□□ -1.71
LRRC49-209ENST00000558271 PLA2G5P39877 138 aa4.37□□□□□ -1.71
LRRC49-209ENST00000558271 NHLH1Q02575 133 aa4.37□□□□□ -1.71
LRRC49-209ENST00000558271 FOXF2Q12947 444 aa4.37□□□□□ -1.71
LRRC49-209ENST00000558271 ZNF362Q5T0B9 420 aaPredicted RBP4.37□□□□□ -1.71
LRRC49-209ENST00000558271 XYLT1Q86Y38 959 aa4.37□□□□□ -1.71
LRRC49-209ENST00000558271 CPEB3Q8NE35 698 aaKnown RBP4.37□□□□□ -1.71
LRRC49-209ENST00000558271 SLC9A6Q92581 669 aa4.37□□□□□ -1.71
LRRC49-209ENST00000558271 ADAM2Q99965 735 aa4.37□□□□□ -1.71
LRRC49-209ENST00000558271 POFUT1Q9H488 388 aa4.37□□□□□ -1.71
LRRC49-209ENST00000558271 CABP5Q9NP86 173 aa4.37□□□□□ -1.71
LRRC49-209ENST00000558271 SPO11Q9Y5K1 396 aa4.37□□□□□ -1.71
LRRC49-209ENST00000558271 MYPNQ86TC9 1320 aa4.37□□□□□ -1.71
LRRC49-209ENST00000558271 PROB1E7EW31 1015 aa4.36□□□□□ -1.71
LRRC49-209ENST00000558271 PLD2O14939 933 aa4.36□□□□□ -1.71
LRRC49-209ENST00000558271 ASLP04424 464 aa4.36□□□□□ -1.71
LRRC49-209ENST00000558271 HSP90B1P14625 803 aaKnown RBP4.36□□□□□ -1.71
LRRC49-209ENST00000558271 DDX6P26196 483 aaKnown RBP eCLIP4.36□□□□□ -1.71
LRRC49-209ENST00000558271 IGFALSP35858 605 aa4.36□□□□□ -1.71
LRRC49-209ENST00000558271 RANGAP1P46060 587 aaPredicted RBP4.36□□□□□ -1.71
LRRC49-209ENST00000558271 PDCD4Q53EL6 469 aaKnown RBP4.36□□□□□ -1.71
LRRC49-209ENST00000558271 CREB3L3Q68CJ9 461 aa4.36□□□□□ -1.71
LRRC49-209ENST00000558271 ASB10Q8WXI3 467 aa4.36□□□□□ -1.71
LRRC49-209ENST00000558271 RTF1Q92541 710 aaKnown RBP4.36□□□□□ -1.71
LRRC49-209ENST00000558271 MKL1Q969V6 931 aa4.36□□□□□ -1.71
LRRC49-209ENST00000558271 CLUHP3Q96NS8 147 aa4.36□□□□□ -1.71
LRRC49-209ENST00000558271 SRPK1Q96SB4 655 aaKnown RBP4.36□□□□□ -1.71
LRRC49-209ENST00000558271 SPATA5L1Q9BVQ7 753 aa4.36□□□□□ -1.71
LRRC49-209ENST00000558271 INTS7Q9NVH2 962 aaKnown RBP4.36□□□□□ -1.71
LRRC49-209ENST00000558271 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.36□□□□□ -1.71
LRRC49-209ENST00000558271 USP36Q9P275 1121 aaKnown RBP4.36□□□□□ -1.71
LRRC49-209ENST00000558271 UNC119BA6NIH7 251 aa4.35□□□□□ -1.71
LRRC49-209ENST00000558271 MARCH11A6NNE9 402 aa4.35□□□□□ -1.71
LRRC49-209ENST00000558271 ELL2O00472 640 aaPredicted RBP4.35□□□□□ -1.71
LRRC49-209ENST00000558271 SEC24DO94855 1032 aaPredicted RBP4.35□□□□□ -1.71
LRRC49-209ENST00000558271 PCDH8O95206 1070 aa4.35□□□□□ -1.71
LRRC49-209ENST00000558271 HLA-DOAP06340 250 aa4.35□□□□□ -1.71
LRRC49-209ENST00000558271 DUSP2Q05923 314 aa4.35□□□□□ -1.71
LRRC49-209ENST00000558271 TP53BP2Q13625 1128 aa4.35□□□□□ -1.71
LRRC49-209ENST00000558271 ZZZ3Q8IYH5 903 aa4.35□□□□□ -1.71
LRRC49-209ENST00000558271 CAGE1Q8TC20 777 aa4.35□□□□□ -1.71
LRRC49-209ENST00000558271 ZNF428Q96B54 188 aa4.35□□□□□ -1.71
LRRC49-209ENST00000558271 FDXACB1Q9BRP7 624 aaPredicted RBP4.35□□□□□ -1.71
LRRC49-209ENST00000558271 SPON1Q9HCB6 807 aa4.35□□□□□ -1.71
LRRC49-209ENST00000558271 SNTG2Q9NY99 539 aa4.35□□□□□ -1.71
LRRC49-209ENST00000558271 PODXL2Q9NZ53 605 aa4.35□□□□□ -1.71
LRRC49-209ENST00000558271 PCDHB6Q9Y5E3 794 aa4.35□□□□□ -1.71
LRRC49-209ENST00000558271 MAST3O60307 1309 aa4.35□□□□□ -1.71
LRRC49-209ENST00000558271 A0A1W2PR48 441 aa4.34□□□□□ -1.71
LRRC49-209ENST00000558271 CBX4O00257 560 aa4.34□□□□□ -1.71
LRRC49-209ENST00000558271 SPDEFO95238 335 aa4.34□□□□□ -1.71
LRRC49-209ENST00000558271 RAPGEF3O95398 923 aa4.34□□□□□ -1.71
LRRC49-209ENST00000558271 IGLV2-14P01704 120 aa4.34□□□□□ -1.71
LRRC49-209ENST00000558271 FLT3P36888 993 aa4.34□□□□□ -1.71
LRRC49-209ENST00000558271 MPP3Q13368 585 aa4.34□□□□□ -1.71
LRRC49-209ENST00000558271 DDB1Q16531 1140 aa4.34□□□□□ -1.71
LRRC49-209ENST00000558271 FAM102AQ5T9C2 384 aaPredicted RBP4.34□□□□□ -1.71
LRRC49-209ENST00000558271 METRNLQ641Q3 311 aa4.34□□□□□ -1.71
LRRC49-209ENST00000558271 SRRM1Q8IYB3 904 aaKnown RBP4.34□□□□□ -1.71
LRRC49-209ENST00000558271 MSL3Q8N5Y2 521 aaKnown RBP4.34□□□□□ -1.71
LRRC49-209ENST00000558271 CDYL2Q8N8U2 506 aa4.34□□□□□ -1.71
LRRC49-209ENST00000558271 OR10H5Q8NGA6 315 aa4.34□□□□□ -1.71
LRRC49-209ENST00000558271 ZMAT4Q9H898 229 aa4.34□□□□□ -1.71
LRRC49-209ENST00000558271 IGSF5Q9NSI5 407 aa4.34□□□□□ -1.71
LRRC49-209ENST00000558271 TLK1Q9UKI8 766 aa4.34□□□□□ -1.71
LRRC49-209ENST00000558271 SALL3Q9BXA9 1300 aa4.34□□□□□ -1.71
LRRC49-209ENST00000558271 MYADML2A6NDP7 307 aa4.33□□□□□ -1.72
LRRC49-209ENST00000558271 TBKBP1A7MCY6 615 aa4.33□□□□□ -1.72
LRRC49-209ENST00000558271 RBMXL2O75526 392 aaKnown RBP4.33□□□□□ -1.72
LRRC49-209ENST00000558271 DNAJC8O75937 253 aaPredicted RBP4.33□□□□□ -1.72
LRRC49-209ENST00000558271 MATN4O95460 622 aa4.33□□□□□ -1.72
LRRC49-209ENST00000558271 SPATA31D3P0C874 917 aa4.33□□□□□ -1.72
LRRC49-209ENST00000558271 RBP3P10745 1247 aa4.33□□□□□ -1.72
LRRC49-209ENST00000558271 APBA1Q02410 837 aa4.33□□□□□ -1.72
LRRC49-209ENST00000558271 RBL2Q08999 1139 aa4.33□□□□□ -1.72
LRRC49-209ENST00000558271 RESTQ13127 1097 aa4.33□□□□□ -1.72
LRRC49-209ENST00000558271 FNDC3BQ53EP0 1204 aaKnown RBP4.33□□□□□ -1.72
LRRC49-209ENST00000558271 ANKS6Q68DC2 871 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms