RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 ANKRD7Q92527 254 aa6.67□□□□□ -1.34
TRPM1-204ENST00000557948 TMEM169Q96HH4 297 aa6.67□□□□□ -1.34
TRPM1-204ENST00000557948 LOXL4Q96JB6 756 aa6.67□□□□□ -1.34
TRPM1-204ENST00000557948 TAAR1Q96RJ0 339 aa6.67□□□□□ -1.34
TRPM1-204ENST00000557948 RMDN3Q96TC7 470 aa6.67□□□□□ -1.34
TRPM1-204ENST00000557948 IER2Q9BTL4 223 aa6.67□□□□□ -1.34
TRPM1-204ENST00000557948 EDEM2Q9BV94 578 aa6.67□□□□□ -1.34
TRPM1-204ENST00000557948 RWDD1Q9H446 243 aaPredicted RBP6.67□□□□□ -1.34
TRPM1-204ENST00000557948 SMOC1Q9H4F8 434 aa6.67□□□□□ -1.34
TRPM1-204ENST00000557948 ATP6V0A4Q9HBG4 840 aa6.67□□□□□ -1.34
TRPM1-204ENST00000557948 C1orf112Q9NSG2 853 aa6.67□□□□□ -1.34
TRPM1-204ENST00000557948 MTMR7Q9Y216 660 aa6.67□□□□□ -1.34
TRPM1-204ENST00000557948 IRAK3Q9Y616 596 aa6.67□□□□□ -1.34
TRPM1-204ENST00000557948 URB1O60287 2271 aaKnown RBP6.67□□□□□ -1.34
TRPM1-204ENST00000557948 APC2O95996 2303 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 CCDC195A0A1B0GUA6 201 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 PCNX2A6NKB5 2137 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 MINDY4BA8MYZ0 360 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 ATXN7O15265 892 aaPredicted RBP6.66□□□□□ -1.34
TRPM1-204ENST00000557948 PRDM1O75626 825 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 EPN2O95208 641 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 RPLP2P05387 115 aaKnown RBP6.66□□□□□ -1.34
TRPM1-204ENST00000557948 GNAI3P08754 354 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 KLRC2P26717 231 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 CXCL12P48061 93 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 ALDH7A1P49419 539 aaKnown RBP6.66□□□□□ -1.34
TRPM1-204ENST00000557948 MFAP1P55081 439 aaKnown RBP6.66□□□□□ -1.34
TRPM1-204ENST00000557948 RAB15P59190 212 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 NUCB2P80303 420 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 SKOR1P84550 965 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 NFX1Q12986 1120 aaKnown RBP6.66□□□□□ -1.34
TRPM1-204ENST00000557948 WTAPQ15007 396 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 UVSSAQ2YD98 709 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 SYDE2Q5VT97 1194 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 HEATR6Q6AI08 1181 aaKnown RBP6.66□□□□□ -1.34
TRPM1-204ENST00000557948 ELMSAN1Q6PJG2 1045 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 CYP26C1Q6V0L0 522 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 LRRC55Q6ZSA7 311 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 SLC24A5Q71RS6 500 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 SKAP1Q86WV1 359 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 ANKMY2Q8IV38 441 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 ABI1Q8IZP0 508 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 SLC39A11Q8N1S5 342 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 ZNF843Q8N446 348 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 FAM184AQ8NB25 1140 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 CMASQ8NFW8 434 aaPredicted RBP6.66□□□□□ -1.34
TRPM1-204ENST00000557948 FAM200AQ8TCP9 573 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 PIBF1Q8WXW3 757 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 SMG7Q92540 1137 aaKnown RBP6.66□□□□□ -1.34
TRPM1-204ENST00000557948 PHKBQ93100 1093 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 ADAM2Q99965 735 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 RPP25Q9BUL9 199 aaKnown RBP6.66□□□□□ -1.34
TRPM1-204ENST00000557948 C1QTNF2Q9BXJ5 285 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 TMEM117Q9H0C3 514 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 FAM49AQ9H0Q0 323 aaPredicted RBP6.66□□□□□ -1.34
TRPM1-204ENST00000557948 ZBP1Q9H171 429 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 CHRDQ9H2X0 955 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 TMX1Q9H3N1 280 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 CCDC86Q9H6F5 360 aaKnown RBP6.66□□□□□ -1.34
TRPM1-204ENST00000557948 PIDD1Q9HB75 910 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 VPS45Q9NRW7 570 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 SPTLC3Q9NUV7 552 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 TUBE1Q9UJT0 475 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 STX8Q9UNK0 236 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 RAXQ9Y2V3 346 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 ABCA12Q86UK0 2595 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 DOCK5Q9H7D0 1870 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 CELSR3Q9NYQ7 3312 aa6.66□□□□□ -1.34
TRPM1-204ENST00000557948 INPPL1O15357 1258 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 CTIFO43310 598 aaKnown RBP6.65□□□□□ -1.34
TRPM1-204ENST00000557948 LZTS3O60299 673 aaPredicted RBP6.65□□□□□ -1.34
TRPM1-204ENST00000557948 NR3C2P08235 984 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 CTSAP10619 480 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 EIF2AK2P19525 551 aaKnown RBP6.65□□□□□ -1.34
TRPM1-204ENST00000557948 UBA1P22314 1058 aaKnown RBP6.65□□□□□ -1.34
TRPM1-204ENST00000557948 SCNN1AP37088 669 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 MPLP40238 635 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 METAP2P50579 478 aaKnown RBP eCLIP6.65□□□□□ -1.34
TRPM1-204ENST00000557948 CLCN4P51793 760 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 POLGP54098 1239 aaPredicted RBP6.65□□□□□ -1.34
TRPM1-204ENST00000557948 SATB1Q01826 763 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 TMEM62Q0P6H9 643 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 FZD5Q13467 585 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 TMEM266Q2M3C6 531 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 USH1GQ495M9 461 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 TCEAL6Q6IPX3 200 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 TTBK2Q6IQ55 1244 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 PARM1Q6UWI2 310 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 FAM43BQ6ZT52 329 aaPredicted RBP6.65□□□□□ -1.34
TRPM1-204ENST00000557948 ZNF771Q7L3S4 317 aaPredicted RBP6.65□□□□□ -1.34
TRPM1-204ENST00000557948 TRIM50Q86XT4 487 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 DEFB124Q8NES8 71 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 SSH1Q8WYL5 1049 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 FGF14Q92915 247 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 TCEAL3Q969E4 200 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 EMILIN2Q9BXX0 1053 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 MAN1C1Q9NR34 630 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 RGS18Q9NS28 235 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 DNAAF2Q9NVR5 837 aaKnown RBP6.65□□□□□ -1.34
TRPM1-204ENST00000557948 TMEM161AQ9NX61 479 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms