RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 GJA8P48165 433 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 CASP5P51878 434 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 CLDN10P78369 228 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 BEX3Q00994 111 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 MBTD1Q05BQ5 628 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 VWA3BQ502W6 1294 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 SPECC1LQ69YQ0 1117 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 NOTUMQ6P988 496 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 MAEAQ7L5Y9 396 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 ANKRD33Q7Z3H0 272 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 FAM186BQ8IYM0 893 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 POMGNT1Q8WZA1 660 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 SCLT1Q96NL6 688 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 MED15Q96RN5 788 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 NOC4LQ9BVI4 516 aaKnown RBP11.47□□□□□ -0.57
GABRB3-213ENST00000557765 CELF4Q9BZC1 486 aaKnown RBP11.47□□□□□ -0.57
GABRB3-213ENST00000557765 ADAMTS10Q9H324 1103 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 NDST4Q9H3R1 872 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 ASB7Q9H672 318 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 PLEKHA5Q9HAU0 1116 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 RTN4Q9NQC3 1192 aaKnown RBP11.47□□□□□ -0.57
GABRB3-213ENST00000557765 MYO6Q9UM54 1294 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 TELO2Q9Y4R8 837 aa11.47□□□□□ -0.57
GABRB3-213ENST00000557765 A0A087WWV3 80 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 A0A1W2PQ45 241 aaPredicted RBP11.46□□□□□ -0.57
GABRB3-213ENST00000557765 A0A1W2PQY0 241 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 INO80B-WBP1J3KQ70 363 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 OGTO15294 1046 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 ZC3H11AO75152 810 aaKnown RBP eCLIP11.46□□□□□ -0.57
GABRB3-213ENST00000557765 GPR32O75388 356 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 ADCY5O95622 1261 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 SRGAP2CP0DJJ0 459 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 CDK7P50613 346 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 RAB27AP51159 221 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 CLCN3P51790 818 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 ZNF75DP51815 510 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 COPB1P53618 953 aaKnown RBP11.46□□□□□ -0.57
GABRB3-213ENST00000557765 STX17P56962 302 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 NLRP11P59045 1033 aaKnown RBP11.46□□□□□ -0.57
GABRB3-213ENST00000557765 IGBP1P78318 339 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 MRPS6P82932 125 aaKnown RBP11.46□□□□□ -0.57
GABRB3-213ENST00000557765 CAP1Q01518 475 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 BFSP1Q12934 665 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 TRIM32Q13049 653 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 NOLC1Q14978 699 aaKnown RBP eCLIP11.46□□□□□ -0.57
GABRB3-213ENST00000557765 SNX17Q15036 470 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 KRT31Q15323 416 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 SNRNP35Q16560 246 aaKnown RBP11.46□□□□□ -0.57
GABRB3-213ENST00000557765 PTGISQ16647 500 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 ZC2HC1CQ53FD0 456 aaPredicted RBP11.46□□□□□ -0.57
GABRB3-213ENST00000557765 ATF7IP2Q5U623 682 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 IRF2BP1Q8IU81 584 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 CNGA4Q8IV77 575 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 NELFCDQ8IXH7 590 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 LRRC71Q8N4P6 559 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 BSNDQ8WZ55 320 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 JAKMIP2Q96AA8 810 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 NLRP4Q96MN2 994 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 ACO2Q99798 780 aaKnown RBP11.46□□□□□ -0.57
GABRB3-213ENST00000557765 TMEM106CQ9BVX2 250 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 FTHL17Q9BXU8 183 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 PTPRHQ9HD43 1115 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 UBN1Q9NPG3 1134 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 TOPORSQ9NS56 1045 aaPredicted RBP11.46□□□□□ -0.57
GABRB3-213ENST00000557765 SAMSN1Q9NSI8 373 aaKnown RBP11.46□□□□□ -0.57
GABRB3-213ENST00000557765 HSPBP1Q9NZL4 362 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 AGO2Q9UKV8 859 aaKnown RBP11.46□□□□□ -0.57
GABRB3-213ENST00000557765 USP20Q9Y2K6 914 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 DERAQ9Y315 318 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 TRPV2Q9Y5S1 764 aa11.46□□□□□ -0.57
GABRB3-213ENST00000557765 ADGRA3Q8IWK6 1321 aa11.45□□□□□ -0.58
GABRB3-213ENST00000557765 FRMPD3Q5JV73 1810 aa11.45□□□□□ -0.58
GABRB3-213ENST00000557765 A0A1W2PQJ5 194 aa11.45□□□□□ -0.58
GABRB3-213ENST00000557765 TRIM49BA6NDI0 452 aa11.45□□□□□ -0.58
GABRB3-213ENST00000557765 CLTAP09496 248 aa11.45□□□□□ -0.58
GABRB3-213ENST00000557765 HSPA1AP0DMV8 641 aaKnown RBP11.45□□□□□ -0.58
GABRB3-213ENST00000557765 HSPA1BP0DMV9 641 aaKnown RBP11.45□□□□□ -0.58
GABRB3-213ENST00000557765 COL6A1P12109 1028 aa11.45□□□□□ -0.58
GABRB3-213ENST00000557765 PMS1P54277 932 aaKnown RBP11.45□□□□□ -0.58
GABRB3-213ENST00000557765 SLC27A1Q6PCB7 646 aa11.45□□□□□ -0.58
GABRB3-213ENST00000557765 TRMT1LQ7Z2T5 733 aaKnown RBP11.45□□□□□ -0.58
GABRB3-213ENST00000557765 CCDC150Q8NCX0 1101 aa11.45□□□□□ -0.58
GABRB3-213ENST00000557765 CCDC112Q8NEF3 446 aa11.45□□□□□ -0.58
GABRB3-213ENST00000557765 ZNF397Q8NF99 534 aaPredicted RBP11.45□□□□□ -0.58
GABRB3-213ENST00000557765 TAF4BQ92750 862 aa11.45□□□□□ -0.58
GABRB3-213ENST00000557765 APBB2Q92870 758 aa11.45□□□□□ -0.58
GABRB3-213ENST00000557765 HPS3Q969F9 1004 aa11.45□□□□□ -0.58
GABRB3-213ENST00000557765 BORCS6Q96GS4 357 aa11.45□□□□□ -0.58
GABRB3-213ENST00000557765 MFSD14AQ96MC6 490 aa11.45□□□□□ -0.58
GABRB3-213ENST00000557765 SH2D3AQ9BRG2 576 aa11.45□□□□□ -0.58
GABRB3-213ENST00000557765 PLCB1Q9NQ66 1216 aa11.45□□□□□ -0.58
GABRB3-213ENST00000557765 AGPAT5Q9NUQ2 364 aa11.45□□□□□ -0.58
GABRB3-213ENST00000557765 A0A087WZ62 844 aa11.44□□□□□ -0.58
GABRB3-213ENST00000557765 MYADML2A6NDP7 307 aa11.44□□□□□ -0.58
GABRB3-213ENST00000557765 DCDC2CA8MYV0 355 aa11.44□□□□□ -0.58
GABRB3-213ENST00000557765 TREHO43280 583 aa11.44□□□□□ -0.58
GABRB3-213ENST00000557765 XPOTO43592 962 aaKnown RBP11.44□□□□□ -0.58
GABRB3-213ENST00000557765 CAPN15O75808 1086 aa11.44□□□□□ -0.58
GABRB3-213ENST00000557765 AKAP3O75969 853 aa11.44□□□□□ -0.58
GABRB3-213ENST00000557765 AFPP02771 609 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms