RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 NDUFB5O43674 189 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 CCNT1O60563 726 aaKnown RBP6.72□□□□□ -1.33
FOXN3-218ENST00000557718 CPNE3O75131 537 aaKnown RBP6.72□□□□□ -1.33
FOXN3-218ENST00000557718 PRPF40AO75400 957 aaKnown RBP6.72□□□□□ -1.33
FOXN3-218ENST00000557718 TBC1D8O95759 1140 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 ARP10275 920 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 ADORA2AP29274 412 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 MARCKSP29966 332 aaPredicted RBP6.72□□□□□ -1.33
FOXN3-218ENST00000557718 COPB2P35606 906 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 COL19A1Q14993 1142 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 STK38Q15208 465 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 ZNF792Q3KQV3 632 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 TMEM63BQ5T3F8 832 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 PCNX4Q63HM2 1172 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 PPP4R3AQ6IN85 833 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 SHC4Q6S5L8 630 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 MOXD1Q6UVY6 613 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 SEZ6L2Q6UXD5 910 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 USP49Q70CQ1 688 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 ANKRD35Q8N283 1001 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 DNAJC5GQ8N7S2 189 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 NPLOC4Q8TAT6 608 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 ETNPPLQ8TBG4 499 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 MORC4Q8TE76 937 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 LRRC15Q8TF66 581 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 SPATA32Q96LK8 384 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 GBP4Q96PP9 640 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 FAM129BQ96TA1 746 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 RMDN3Q96TC7 470 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 MAF1Q9H063 256 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 KATNBL1Q9H079 304 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 GOLPH3LQ9H4A5 285 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 BCAS3Q9H6U6 928 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 NPHS2Q9NP85 383 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 KCNMB3Q9NPA1 279 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 C1GALT1Q9NS00 363 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 FBXO40Q9UH90 709 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 GJD2Q9UKL4 321 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 NOL7Q9UMY1 257 aaKnown RBP6.72□□□□□ -1.33
FOXN3-218ENST00000557718 TELO2Q9Y4R8 837 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 ATP6V1DQ9Y5K8 247 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 UBIAD1Q9Y5Z9 338 aa6.72□□□□□ -1.33
FOXN3-218ENST00000557718 SCN10AQ9Y5Y9 1956 aa6.71□□□□□ -1.33
FOXN3-218ENST00000557718 A0A087X0B3 334 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 KRTAP4-8A0A0G2JLE6 195 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 PP2D1A8MPX8 630 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 MEIS1O00470 390 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 MSH4O15457 936 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 DYNC1LI2O43237 492 aaPredicted RBP6.71□□□□□ -1.34
FOXN3-218ENST00000557718 NEMFO60524 1076 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 PPP6R2O75170 966 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 FCER1AP12319 257 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 LIG1P18858 919 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 PTGS1P23219 599 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 SPIRE1Q08AE8 756 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 ITGB3BPQ13352 177 aaPredicted RBP6.71□□□□□ -1.34
FOXN3-218ENST00000557718 ORC2Q13416 577 aaPredicted RBP6.71□□□□□ -1.34
FOXN3-218ENST00000557718 Q4G0T1 1027 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 WDR78Q5VTH9 848 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 MCTP2Q6DN12 878 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 B3GNT9Q6UX72 402 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 PLEKHH3Q7Z736 793 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 ABRAQ8N0Z2 381 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 FLCNQ8NFG4 579 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 INPP4AQ96PE3 977 aaPredicted RBP6.71□□□□□ -1.34
FOXN3-218ENST00000557718 MXRA8Q9BRK3 442 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 WDR11Q9BZH6 1224 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 SCAND2PQ9GZW5 306 aaPredicted RBP6.71□□□□□ -1.34
FOXN3-218ENST00000557718 PAK6Q9NQU5 681 aaPredicted RBP6.71□□□□□ -1.34
FOXN3-218ENST00000557718 FLRT1Q9NZU1 646 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 DDX25Q9UHL0 483 aaKnown RBP6.71□□□□□ -1.34
FOXN3-218ENST00000557718 VAV3Q9UKW4 847 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 CFAP45Q9UL16 551 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 SRPRBQ9Y5M8 271 aaKnown RBP6.71□□□□□ -1.34
FOXN3-218ENST00000557718 SYNGAP1Q96PV0 1343 aa6.71□□□□□ -1.34
FOXN3-218ENST00000557718 FAM237AA0A1B0GTK4 181 aa6.7□□□□□ -1.34
FOXN3-218ENST00000557718 SLC15A5A6NIM6 579 aa6.7□□□□□ -1.34
FOXN3-218ENST00000557718 CUTAO60888 179 aa6.7□□□□□ -1.34
FOXN3-218ENST00000557718 ATP9AO75110 1047 aa6.7□□□□□ -1.34
FOXN3-218ENST00000557718 PSMD10O75832 226 aa6.7□□□□□ -1.34
FOXN3-218ENST00000557718 ARIH2O95376 493 aa6.7□□□□□ -1.34
FOXN3-218ENST00000557718 HOXC6P09630 235 aa6.7□□□□□ -1.34
FOXN3-218ENST00000557718 OR52Z1P0C646 297 aa6.7□□□□□ -1.34
FOXN3-218ENST00000557718 MYCLP12524 364 aaPredicted RBP6.7□□□□□ -1.34
FOXN3-218ENST00000557718 GCFC2P16383 781 aaKnown RBP6.7□□□□□ -1.34
FOXN3-218ENST00000557718 MAPK4P31152 587 aa6.7□□□□□ -1.34
FOXN3-218ENST00000557718 PRPHP41219 470 aa6.7□□□□□ -1.34
FOXN3-218ENST00000557718 CCNA1P78396 465 aa6.7□□□□□ -1.34
FOXN3-218ENST00000557718 LACTBP83111 547 aaPredicted RBP6.7□□□□□ -1.34
FOXN3-218ENST00000557718 KCTD2Q14681 263 aa6.7□□□□□ -1.34
FOXN3-218ENST00000557718 CCL14Q16627 93 aa6.7□□□□□ -1.34
FOXN3-218ENST00000557718 CEP55Q53EZ4 464 aa6.7□□□□□ -1.34
FOXN3-218ENST00000557718 PRR16Q569H4 304 aa6.7□□□□□ -1.34
FOXN3-218ENST00000557718 SPECC1Q5M775 1068 aa6.7□□□□□ -1.34
FOXN3-218ENST00000557718 ARHGEF16Q5VV41 709 aa6.7□□□□□ -1.34
FOXN3-218ENST00000557718 RESP18Q5W5W9 173 aa6.7□□□□□ -1.34
FOXN3-218ENST00000557718 OGFOD3Q6PK18 319 aa6.7□□□□□ -1.34
FOXN3-218ENST00000557718 MAMDC4Q6UXC1 1216 aa6.7□□□□□ -1.34
FOXN3-218ENST00000557718 NIPA1Q7RTP0 329 aa6.7□□□□□ -1.34
FOXN3-218ENST00000557718 PLA2G4DQ86XP0 818 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms