RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 CXXC1Q9P0U4 656 aaPredicted RBP16.76■□□□□ 0.27
NEDD1-213ENST00000557644 ENPP3O14638 875 aa16.75■□□□□ 0.27
NEDD1-213ENST00000557644 SCP2P22307 547 aa16.75■□□□□ 0.27
NEDD1-213ENST00000557644 PRCPP42785 496 aa16.75■□□□□ 0.27
NEDD1-213ENST00000557644 UBXN11Q5T124 520 aa16.75■□□□□ 0.27
NEDD1-213ENST00000557644 STXBP4Q6ZWJ1 553 aa16.75■□□□□ 0.27
NEDD1-213ENST00000557644 MYOCDQ8IZQ8 938 aa16.75■□□□□ 0.27
NEDD1-213ENST00000557644 SYCP3Q8IZU3 236 aa16.75■□□□□ 0.27
NEDD1-213ENST00000557644 HVCN1Q96D96 273 aa16.75■□□□□ 0.27
NEDD1-213ENST00000557644 FTHL17Q9BXU8 183 aa16.75■□□□□ 0.27
NEDD1-213ENST00000557644 HAPLN2Q9GZV7 340 aa16.75■□□□□ 0.27
NEDD1-213ENST00000557644 TSPYL2Q9H2G4 693 aaPredicted RBP16.75■□□□□ 0.27
NEDD1-213ENST00000557644 CHST12Q9NRB3 414 aa16.75■□□□□ 0.27
NEDD1-213ENST00000557644 ANKFY1Q9P2R3 1169 aa16.75■□□□□ 0.27
NEDD1-213ENST00000557644 CD44P16070 742 aaKnown RBP16.75■□□□□ 0.27
NEDD1-213ENST00000557644 AXLP30530 894 aa16.75■□□□□ 0.27
NEDD1-213ENST00000557644 LIG4P49917 911 aa16.75■□□□□ 0.27
NEDD1-213ENST00000557644 BMT2Q1RMZ1 405 aa16.75■□□□□ 0.27
NEDD1-213ENST00000557644 PSRC1Q6PGN9 363 aaPredicted RBP16.75■□□□□ 0.27
NEDD1-213ENST00000557644 ZBTB33Q86T24 672 aa16.75■□□□□ 0.27
NEDD1-213ENST00000557644 PTPRHQ9HD43 1115 aa16.75■□□□□ 0.27
NEDD1-213ENST00000557644 RGS18Q9NS28 235 aa16.75■□□□□ 0.27
NEDD1-213ENST00000557644 TNFSF13BQ9Y275 285 aa16.75■□□□□ 0.27
NEDD1-213ENST00000557644 ABLIM1O14639 778 aa16.74■□□□□ 0.27
NEDD1-213ENST00000557644 PIGRP01833 764 aa16.74■□□□□ 0.27
NEDD1-213ENST00000557644 ABCD1P33897 745 aa16.74■□□□□ 0.27
NEDD1-213ENST00000557644 SKOR2Q2VWA4 1001 aaPredicted RBP16.74■□□□□ 0.27
NEDD1-213ENST00000557644 ZPBP2Q6X784 338 aa16.74■□□□□ 0.27
NEDD1-213ENST00000557644 TMCO2Q7Z6W1 182 aaPredicted RBP16.74■□□□□ 0.27
NEDD1-213ENST00000557644 HES2Q9Y543 173 aa16.74■□□□□ 0.27
NEDD1-213ENST00000557644 ABHD14A-ACY1A0A1B0GW23 586 aa16.74■□□□□ 0.27
NEDD1-213ENST00000557644 ZBBXA8MT70 800 aa16.74■□□□□ 0.27
NEDD1-213ENST00000557644 TGFB1I1O43294 461 aa16.74■□□□□ 0.27
NEDD1-213ENST00000557644 TOM1L1O75674 476 aa16.74■□□□□ 0.27
NEDD1-213ENST00000557644 NPTXRO95502 500 aa16.74■□□□□ 0.27
NEDD1-213ENST00000557644 HARSP12081 509 aaKnown RBP16.74■□□□□ 0.27
NEDD1-213ENST00000557644 PROZP22891 400 aa16.74■□□□□ 0.27
NEDD1-213ENST00000557644 ADSSP30520 456 aa16.74■□□□□ 0.27
NEDD1-213ENST00000557644 DEFB103AP81534 67 aa16.74■□□□□ 0.27
NEDD1-213ENST00000557644 KNOP1Q1ED39 458 aaKnown RBP16.74■□□□□ 0.27
NEDD1-213ENST00000557644 SLC27A1Q6PCB7 646 aa16.74■□□□□ 0.27
NEDD1-213ENST00000557644 SYAP1Q96A49 352 aaPredicted RBP16.74■□□□□ 0.27
NEDD1-213ENST00000557644 TCHPQ9BT92 498 aa16.74■□□□□ 0.27
NEDD1-213ENST00000557644 UBE2OQ9C0C9 1292 aaKnown RBP16.74■□□□□ 0.27
NEDD1-213ENST00000557644 TMEM206Q9H813 350 aa16.74■□□□□ 0.27
NEDD1-213ENST00000557644 EXOC7Q9UPT5 735 aa16.74■□□□□ 0.27
NEDD1-213ENST00000557644 C9IYK1 514 aa16.73■□□□□ 0.27
NEDD1-213ENST00000557644 ACTN1P12814 892 aa16.73■□□□□ 0.27
NEDD1-213ENST00000557644 WDR5P61964 334 aaKnown RBP16.73■□□□□ 0.27
NEDD1-213ENST00000557644 SHHQ15465 462 aa16.73■□□□□ 0.27
NEDD1-213ENST00000557644 ZNF568Q3ZCX4 644 aa16.73■□□□□ 0.27
NEDD1-213ENST00000557644 KCTD10Q9H3F6 313 aa16.73■□□□□ 0.27
NEDD1-213ENST00000557644 FAM105AQ9NUU6 356 aa16.73■□□□□ 0.27
NEDD1-213ENST00000557644 UBE4BO95155 1302 aa16.73■□□□□ 0.27
NEDD1-213ENST00000557644 N4BP3O15049 544 aa16.73■□□□□ 0.27
NEDD1-213ENST00000557644 SEZ6Q53EL9 994 aa16.73■□□□□ 0.27
NEDD1-213ENST00000557644 MPZL3Q6UWV2 235 aa16.73■□□□□ 0.27
NEDD1-213ENST00000557644 SLC24A5Q71RS6 500 aa16.73■□□□□ 0.27
NEDD1-213ENST00000557644 GUF1Q8N442 669 aaKnown RBP16.73■□□□□ 0.27
NEDD1-213ENST00000557644 CEP120Q8N960 986 aa16.73■□□□□ 0.27
NEDD1-213ENST00000557644 TRIML1Q8N9V2 468 aa16.73■□□□□ 0.27
NEDD1-213ENST00000557644 HERVK_113Q902F9 699 aa16.73■□□□□ 0.27
NEDD1-213ENST00000557644 GBP3Q9H0R5 595 aa16.73■□□□□ 0.27
NEDD1-213ENST00000557644 CDT1Q9H211 546 aa16.73■□□□□ 0.27
NEDD1-213ENST00000557644 PCDHB2Q9Y5E7 798 aa16.73■□□□□ 0.27
NEDD1-213ENST00000557644 A0A0U1RQF3 1178 aa16.72■□□□□ 0.27
NEDD1-213ENST00000557644 MEIS3P2A8K0S8 358 aa16.72■□□□□ 0.27
NEDD1-213ENST00000557644 PPP1R3GB7ZBB8 358 aa16.72■□□□□ 0.27
NEDD1-213ENST00000557644 CLDN3O15551 220 aa16.72■□□□□ 0.27
NEDD1-213ENST00000557644 BAIAP3O94812 1187 aa16.72■□□□□ 0.27
NEDD1-213ENST00000557644 MATR3P43243 847 aaKnown RBP eCLIP16.72■□□□□ 0.27
NEDD1-213ENST00000557644 DPCR1Q3MIW9 517 aa16.72■□□□□ 0.27
NEDD1-213ENST00000557644 KLHL10Q6JEL2 608 aa16.72■□□□□ 0.27
NEDD1-213ENST00000557644 ADSSL1Q8N142 457 aa16.72■□□□□ 0.27
NEDD1-213ENST00000557644 SMG8Q8ND04 991 aaKnown RBP16.72■□□□□ 0.27
NEDD1-213ENST00000557644 CBWD1Q9BRT8 395 aa16.72■□□□□ 0.27
NEDD1-213ENST00000557644 TRIM6Q9C030 488 aaPredicted RBP16.72■□□□□ 0.27
NEDD1-213ENST00000557644 NXF3Q9H4D5 531 aaKnown RBP16.72■□□□□ 0.27
NEDD1-213ENST00000557644 ATF7P17544 494 aaPredicted RBP16.72■□□□□ 0.27
NEDD1-213ENST00000557644 RNF169Q8NCN4 708 aa16.72■□□□□ 0.27
NEDD1-213ENST00000557644 ZSWIM2Q8NEG5 633 aa16.72■□□□□ 0.27
NEDD1-213ENST00000557644 LPPQ93052 612 aa16.72■□□□□ 0.27
NEDD1-213ENST00000557644 CCDC51Q96ER9 411 aa16.72■□□□□ 0.27
NEDD1-213ENST00000557644 ADPGKQ9BRR6 497 aa16.72■□□□□ 0.27
NEDD1-213ENST00000557644 TRAIPQ9BWF2 469 aa16.72■□□□□ 0.27
NEDD1-213ENST00000557644 RNF39Q9H2S5 420 aa16.72■□□□□ 0.27
NEDD1-213ENST00000557644 SEMA6BQ9H3T3 888 aa16.72■□□□□ 0.27
NEDD1-213ENST00000557644 IPPQ9Y573 584 aa16.72■□□□□ 0.27
NEDD1-213ENST00000557644 MICAL3Q7RTP6 2002 aa16.71■□□□□ 0.27
NEDD1-213ENST00000557644 A0A0B4J269 797 aa16.71■□□□□ 0.27
NEDD1-213ENST00000557644 CLIC2O15247 247 aa16.71■□□□□ 0.27
NEDD1-213ENST00000557644 PMS1P54277 932 aaKnown RBP16.71■□□□□ 0.27
NEDD1-213ENST00000557644 OSTNP61366 133 aa16.71■□□□□ 0.27
NEDD1-213ENST00000557644 MCL1Q07820 350 aa16.71■□□□□ 0.27
NEDD1-213ENST00000557644 NOLC1Q14978 699 aaKnown RBP eCLIP16.71■□□□□ 0.27
NEDD1-213ENST00000557644 ZBTB41Q5SVQ8 909 aa16.71■□□□□ 0.27
NEDD1-213ENST00000557644 ECHDC2Q86YB7 292 aa16.71■□□□□ 0.27
NEDD1-213ENST00000557644 TMEM192Q8IY95 271 aa16.71■□□□□ 0.27
NEDD1-213ENST00000557644 POMGNT1Q8WZA1 660 aa16.71■□□□□ 0.27
NEDD1-213ENST00000557644 APOL6Q9BWW8 343 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms