RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 DDB1Q16531 1140 aa4.54□□□□□ -1.68
FOXN3-217ENST00000557572 LONRF2Q1L5Z9 754 aa4.54□□□□□ -1.68
FOXN3-217ENST00000557572 CCDC144BQ3MJ40 725 aa4.54□□□□□ -1.68
FOXN3-217ENST00000557572 KIAA1614Q5VZ46 1190 aa4.54□□□□□ -1.68
FOXN3-217ENST00000557572 BMP8AQ7Z5Y6 402 aa4.54□□□□□ -1.68
FOXN3-217ENST00000557572 MCF2L2Q86YR7 1114 aa4.54□□□□□ -1.68
FOXN3-217ENST00000557572 EXOC8Q8IYI6 725 aa4.54□□□□□ -1.68
FOXN3-217ENST00000557572 OR5AN1Q8NGI8 311 aa4.54□□□□□ -1.68
FOXN3-217ENST00000557572 HNRNPLLQ8WVV9 542 aaKnown RBP4.54□□□□□ -1.68
FOXN3-217ENST00000557572 WDR92Q96MX6 357 aa4.54□□□□□ -1.68
FOXN3-217ENST00000557572 SPATA9Q9BWV2 254 aa4.54□□□□□ -1.68
FOXN3-217ENST00000557572 CELF4Q9BZC1 486 aaKnown RBP4.54□□□□□ -1.68
FOXN3-217ENST00000557572 C14orf93Q9H972 538 aaKnown RBP4.54□□□□□ -1.68
FOXN3-217ENST00000557572 CHST2Q9Y4C5 530 aa4.54□□□□□ -1.68
FOXN3-217ENST00000557572 PCDHA8Q9Y5H6 950 aa4.54□□□□□ -1.68
FOXN3-217ENST00000557572 MAST3O60307 1309 aa4.53□□□□□ -1.68
FOXN3-217ENST00000557572 H3BNC9 293 aa4.53□□□□□ -1.68
FOXN3-217ENST00000557572 ADCY3O60266 1144 aa4.53□□□□□ -1.68
FOXN3-217ENST00000557572 DNAJC6O75061 913 aa4.53□□□□□ -1.68
FOXN3-217ENST00000557572 HLA-DOAP06340 250 aa4.53□□□□□ -1.68
FOXN3-217ENST00000557572 CELA2AP08217 269 aa4.53□□□□□ -1.68
FOXN3-217ENST00000557572 SRGAP2CP0DJJ0 459 aa4.53□□□□□ -1.68
FOXN3-217ENST00000557572 KIR2DL3P43628 341 aa4.53□□□□□ -1.68
FOXN3-217ENST00000557572 SDE2Q6IQ49 451 aa4.53□□□□□ -1.68
FOXN3-217ENST00000557572 ANKS3Q6ZW76 656 aa4.53□□□□□ -1.68
FOXN3-217ENST00000557572 E2F7Q96AV8 911 aa4.53□□□□□ -1.68
FOXN3-217ENST00000557572 ADAM2Q99965 735 aa4.53□□□□□ -1.68
FOXN3-217ENST00000557572 PDCD2LQ9BRP1 358 aa4.53□□□□□ -1.68
FOXN3-217ENST00000557572 TANGO6Q9C0B7 1094 aa4.53□□□□□ -1.68
FOXN3-217ENST00000557572 ST7Q9NRC1 585 aa4.53□□□□□ -1.68
FOXN3-217ENST00000557572 HDAC5Q9UQL6 1122 aa4.53□□□□□ -1.68
FOXN3-217ENST00000557572 TMA7Q9Y2S6 64 aaKnown RBP4.53□□□□□ -1.68
FOXN3-217ENST00000557572 MSRB2Q9Y3D2 182 aa4.53□□□□□ -1.68
FOXN3-217ENST00000557572 TBX22Q9Y458 520 aa4.53□□□□□ -1.68
FOXN3-217ENST00000557572 LRP12Q9Y561 859 aa4.53□□□□□ -1.68
FOXN3-217ENST00000557572 ERVV-2B6SEH9 535 aa4.52□□□□□ -1.69
FOXN3-217ENST00000557572 MTSS1O43312 755 aa4.52□□□□□ -1.69
FOXN3-217ENST00000557572 PARNO95453 639 aaKnown RBP4.52□□□□□ -1.69
FOXN3-217ENST00000557572 NPTXRO95502 500 aa4.52□□□□□ -1.69
FOXN3-217ENST00000557572 FNTBP49356 437 aa4.52□□□□□ -1.69
FOXN3-217ENST00000557572 PROK1P58294 105 aa4.52□□□□□ -1.69
FOXN3-217ENST00000557572 TM4SF20Q53R12 229 aa4.52□□□□□ -1.69
FOXN3-217ENST00000557572 RTN4RL1Q86UN2 441 aaPredicted RBP4.52□□□□□ -1.69
FOXN3-217ENST00000557572 ZBTB8BQ8NAP8 495 aaPredicted RBP4.52□□□□□ -1.69
FOXN3-217ENST00000557572 FOXRED1Q96CU9 486 aaPredicted RBP4.52□□□□□ -1.69
FOXN3-217ENST00000557572 TINF2Q9BSI4 451 aa4.52□□□□□ -1.69
FOXN3-217ENST00000557572 MYH16Q9H6N6 1097 aa4.52□□□□□ -1.69
FOXN3-217ENST00000557572 DNAI1Q9UI46 699 aa4.52□□□□□ -1.69
FOXN3-217ENST00000557572 MAP3K2Q9Y2U5 619 aa4.52□□□□□ -1.69
FOXN3-217ENST00000557572 TRBV23-1A0A0A0MS06 115 aa4.51□□□□□ -1.69
FOXN3-217ENST00000557572 TP73O15350 636 aa4.51□□□□□ -1.69
FOXN3-217ENST00000557572 HNRNPLP14866 589 aaKnown RBP eCLIP4.51□□□□□ -1.691e-7■□□□□ 8.5
FOXN3-217ENST00000557572 CCT4P50991 539 aaKnown RBP4.51□□□□□ -1.69
FOXN3-217ENST00000557572 RAB33AQ14088 237 aa4.51□□□□□ -1.69
FOXN3-217ENST00000557572 PTPROQ16827 1216 aa4.51□□□□□ -1.69
FOXN3-217ENST00000557572 ZC3H12BQ5HYM0 836 aaKnown RBP4.51□□□□□ -1.69
FOXN3-217ENST00000557572 SLC43A3Q8NBI5 491 aa4.51□□□□□ -1.69
FOXN3-217ENST00000557572 DYDC2Q96IM9 177 aa4.51□□□□□ -1.69
FOXN3-217ENST00000557572 ASB6Q9NWX5 421 aa4.51□□□□□ -1.69
FOXN3-217ENST00000557572 PRR23D1E9PI22 279 aaPredicted RBP4.5□□□□□ -1.69
FOXN3-217ENST00000557572 EFCAB14O75071 495 aa4.5□□□□□ -1.69
FOXN3-217ENST00000557572 NTN1O95631 604 aa4.5□□□□□ -1.69
FOXN3-217ENST00000557572 PRR23D2P0DMB1 279 aaPredicted RBP4.5□□□□□ -1.69
FOXN3-217ENST00000557572 ZSCAN20P17040 1043 aaPredicted RBP4.5□□□□□ -1.69
FOXN3-217ENST00000557572 DNM2P50570 870 aa4.5□□□□□ -1.69
FOXN3-217ENST00000557572 IGBP1P78318 339 aa4.5□□□□□ -1.69
FOXN3-217ENST00000557572 NHLH2Q02577 135 aa4.5□□□□□ -1.69
FOXN3-217ENST00000557572 RESTQ13127 1097 aa4.5□□□□□ -1.69
FOXN3-217ENST00000557572 TMEM132BQ14DG7 1078 aa4.5□□□□□ -1.69
FOXN3-217ENST00000557572 CATSPEREQ5SY80 951 aa4.5□□□□□ -1.69
FOXN3-217ENST00000557572 AKNAD1Q5T1N1 836 aa4.5□□□□□ -1.69
FOXN3-217ENST00000557572 C11orf87Q6NUJ2 197 aa4.5□□□□□ -1.69
FOXN3-217ENST00000557572 CC2D1AQ6P1N0 951 aaPredicted RBP4.5□□□□□ -1.69
FOXN3-217ENST00000557572 OTOP1Q7RTM1 612 aa4.5□□□□□ -1.69
FOXN3-217ENST00000557572 ZBTB38Q8NAP3 1195 aaPredicted RBP4.5□□□□□ -1.69
FOXN3-217ENST00000557572 Q96MF0 132 aa4.5□□□□□ -1.69
FOXN3-217ENST00000557572 LSM14BQ9BX40 385 aaKnown RBP4.5□□□□□ -1.69
FOXN3-217ENST00000557572 VPS33BQ9H267 617 aa4.5□□□□□ -1.69
FOXN3-217ENST00000557572 ACSS2Q9NR19 701 aa4.5□□□□□ -1.69
FOXN3-217ENST00000557572 POLR3BQ9NW08 1133 aaPredicted RBP4.5□□□□□ -1.69
FOXN3-217ENST00000557572 KCMF1Q9P0J7 381 aa4.5□□□□□ -1.69
FOXN3-217ENST00000557572 SLC17A6Q9P2U8 582 aa4.5□□□□□ -1.69
FOXN3-217ENST00000557572 SLC12A8A0AV02 714 aa4.49□□□□□ -1.69
FOXN3-217ENST00000557572 DIRC3C9JPN6 131 aa4.49□□□□□ -1.69
FOXN3-217ENST00000557572 PEX14O75381 377 aa4.49□□□□□ -1.69
FOXN3-217ENST00000557572 RASGRP1O95267 797 aa4.49□□□□□ -1.69
FOXN3-217ENST00000557572 CFBP00751 764 aa4.49□□□□□ -1.69
FOXN3-217ENST00000557572 PRLP01236 227 aa4.49□□□□□ -1.69
FOXN3-217ENST00000557572 GTF2F1P35269 517 aaKnown RBP eCLIP4.49□□□□□ -1.69
FOXN3-217ENST00000557572 RASGRF1Q13972 1273 aa4.49□□□□□ -1.69
FOXN3-217ENST00000557572 PDCD4Q53EL6 469 aaKnown RBP4.49□□□□□ -1.69
FOXN3-217ENST00000557572 TRIM61Q5EBN2 209 aa4.49□□□□□ -1.69
FOXN3-217ENST00000557572 GORABQ5T7V8 394 aa4.49□□□□□ -1.69
FOXN3-217ENST00000557572 GSTCDQ8NEC7 633 aa4.49□□□□□ -1.69
FOXN3-217ENST00000557572 ZNF48Q96MX3 618 aaPredicted RBP4.49□□□□□ -1.69
FOXN3-217ENST00000557572 METTL14Q9HCE5 456 aaKnown RBP4.49□□□□□ -1.69
FOXN3-217ENST00000557572 IL17RBQ9NRM6 502 aa4.49□□□□□ -1.69
FOXN3-217ENST00000557572 LRIT1Q9P2V4 623 aa4.49□□□□□ -1.69
FOXN3-217ENST00000557572 ZNF521Q96K83 1311 aa4.48□□□□□ -1.69
FOXN3-217ENST00000557572 hCG_2014768A0A024R1R8 64 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms