RNA–Protein interactions for RNA: ENST00000557498.1

ARHGEF40-208, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-208ENST00000557498 RDH13Q8NBN7 331 aa15.79■□□□□ 0.12
ARHGEF40-208ENST00000557498 CCDC150Q8NCX0 1101 aa15.79■□□□□ 0.12
ARHGEF40-208ENST00000557498 ZSWIM2Q8NEG5 633 aa15.79■□□□□ 0.12
ARHGEF40-208ENST00000557498 DNAJB3Q8WWF6 145 aa15.79■□□□□ 0.12
ARHGEF40-208ENST00000557498 SLC35C1Q96A29 364 aa15.79■□□□□ 0.12
ARHGEF40-208ENST00000557498 PRIMPOLQ96LW4 560 aa15.79■□□□□ 0.12
ARHGEF40-208ENST00000557498 ACO2Q99798 780 aaKnown RBP15.79■□□□□ 0.12
ARHGEF40-208ENST00000557498 UNC93B1Q9H1C4 597 aa15.79■□□□□ 0.12
ARHGEF40-208ENST00000557498 ADAMTS10Q9H324 1103 aa15.79■□□□□ 0.12
ARHGEF40-208ENST00000557498 MINDY3Q9H8M7 445 aa15.79■□□□□ 0.12
ARHGEF40-208ENST00000557498 KIAA1586Q9HCI6 787 aa15.79■□□□□ 0.12
ARHGEF40-208ENST00000557498 ANKFY1Q9P2R3 1169 aa15.79■□□□□ 0.12
ARHGEF40-208ENST00000557498 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.79■□□□□ 0.12
ARHGEF40-208ENST00000557498 GRIN2DO15399 1336 aa15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 CNTNAP2Q9UHC6 1331 aa15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 A0A0B4J269 797 aa15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 TTLL13PA6NNM8 815 aa15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 EXTL3O43909 919 aa15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 GPR32O75388 356 aa15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 TOM1L1O75674 476 aa15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 MATR3P43243 847 aaKnown RBP eCLIP15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 TMEM62Q0P6H9 643 aa15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 TRIM14Q14142 442 aa15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 SNRNP35Q16560 246 aaKnown RBP15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 AMHR2Q16671 573 aa15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 KIZQ2M2Z5 673 aa15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 SLC9C1Q4G0N8 1177 aa15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 ATF7IP2Q5U623 682 aa15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 GDF6Q6KF10 455 aaPredicted RBP15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 TSHZ1Q6ZSZ6 1077 aa15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 CBWD2Q8IUF1 395 aa15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 ZNF710Q8N1W2 664 aa15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 NME8Q8N427 588 aa15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 ARRDC4Q8NCT1 418 aa15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 ZBTB45Q96K62 511 aaPredicted RBP15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 GCOM2Q9BZD3 368 aaPredicted RBP15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 HAPLN2Q9GZV7 340 aa15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 AGO2Q9UKV8 859 aaKnown RBP15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 SIK3Q9Y2K2 1263 aa15.78■□□□□ 0.12
ARHGEF40-208ENST00000557498 ABLIM1O14639 778 aa15.77■□□□□ 0.12
ARHGEF40-208ENST00000557498 B4GALT5O43286 388 aa15.77■□□□□ 0.12
ARHGEF40-208ENST00000557498 LDHAP00338 332 aaKnown RBP15.77■□□□□ 0.12
ARHGEF40-208ENST00000557498 IQCF3P0C7M6 154 aa15.77■□□□□ 0.12
ARHGEF40-208ENST00000557498 HSPA8P11142 646 aaKnown RBP15.77■□□□□ 0.12
ARHGEF40-208ENST00000557498 PROZP22891 400 aa15.77■□□□□ 0.12
ARHGEF40-208ENST00000557498 VAMP7P51809 220 aa15.77■□□□□ 0.12
ARHGEF40-208ENST00000557498 MCCD1P59942 119 aaPredicted RBP15.77■□□□□ 0.12
ARHGEF40-208ENST00000557498 PTPN11Q06124 597 aaPredicted RBP15.77■□□□□ 0.12
ARHGEF40-208ENST00000557498 ENPEPQ07075 957 aa15.77■□□□□ 0.12
ARHGEF40-208ENST00000557498 CYP24A1Q07973 514 aa15.77■□□□□ 0.12
ARHGEF40-208ENST00000557498 MPZL3Q6UWV2 235 aa15.77■□□□□ 0.12
ARHGEF40-208ENST00000557498 PPFIBP1Q86W92 1011 aa15.77■□□□□ 0.12
ARHGEF40-208ENST00000557498 MFSD14AQ96MC6 490 aa15.77■□□□□ 0.12
ARHGEF40-208ENST00000557498 PCMTD1Q96MG8 357 aaPredicted RBP15.77■□□□□ 0.12
ARHGEF40-208ENST00000557498 GLT1D1Q96MS3 346 aa15.77■□□□□ 0.12
ARHGEF40-208ENST00000557498 FAM213AQ9BRX8 229 aa15.77■□□□□ 0.12
ARHGEF40-208ENST00000557498 MSTO1Q9BUK6 570 aa15.77■□□□□ 0.12
ARHGEF40-208ENST00000557498 PAK6Q9NQU5 681 aaPredicted RBP15.77■□□□□ 0.12
ARHGEF40-208ENST00000557498 TNFSF13BQ9Y275 285 aa15.77■□□□□ 0.12
ARHGEF40-208ENST00000557498 ZNF233A6NK53 670 aa15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 CLDN3O15551 220 aa15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 TSPAN1O60635 241 aa15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 GYPCP04921 128 aa15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 RPLP2P05387 115 aaKnown RBP15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 TPM1P09493 284 aa15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 TRIM49P0CI25 452 aa15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 TRIM49CP0CI26 452 aa15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 DARSP14868 501 aaKnown RBP15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 KLK7P49862 253 aa15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 MCL1Q07820 350 aa15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 ITGA7Q13683 1181 aa15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 ARID5BQ14865 1188 aa15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 NOLC1Q14978 699 aaKnown RBP eCLIP15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 TMEM132AQ24JP5 1023 aa15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 ZNF568Q3ZCX4 644 aa15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 CCDC155Q8N6L0 562 aa15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 PLEKHO2Q8TD55 490 aa15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 OSMRQ99650 979 aa15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 NUP58Q9BVL2 599 aa15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 PTPRHQ9HD43 1115 aa15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 PHF24Q9UPV7 400 aa15.76■□□□□ 0.11
ARHGEF40-208ENST00000557498 GTPBP10A4D1E9 387 aaKnown RBP15.75■□□□□ 0.11
ARHGEF40-208ENST00000557498 KBTBD13C9JR72 458 aa15.75■□□□□ 0.11
ARHGEF40-208ENST00000557498 CSDE1O75534 798 aaKnown RBP15.75■□□□□ 0.11
ARHGEF40-208ENST00000557498 ERLIN2O94905 339 aa15.75■□□□□ 0.11
ARHGEF40-208ENST00000557498 HARSP12081 509 aaKnown RBP15.75■□□□□ 0.11
ARHGEF40-208ENST00000557498 CCL5P13501 91 aa15.75■□□□□ 0.11
ARHGEF40-208ENST00000557498 SFPQP23246 707 aaKnown RBP eCLIP15.75■□□□□ 0.11
ARHGEF40-208ENST00000557498 FMO5P49326 533 aa15.75■□□□□ 0.11
ARHGEF40-208ENST00000557498 RBL2Q08999 1139 aa15.75■□□□□ 0.11
ARHGEF40-208ENST00000557498 KCNMA1Q12791 1236 aa15.75■□□□□ 0.11
ARHGEF40-208ENST00000557498 PCBP1Q15365 356 aaKnown RBP eCLIP15.75■□□□□ 0.11
ARHGEF40-208ENST00000557498 EEF1DP3Q658K8 133 aa15.75■□□□□ 0.11
ARHGEF40-208ENST00000557498 CTU1Q7Z7A3 348 aaKnown RBP15.75■□□□□ 0.11
ARHGEF40-208ENST00000557498 ZBTB33Q86T24 672 aa15.75■□□□□ 0.11
ARHGEF40-208ENST00000557498 RPAINQ86UA6 219 aa15.75■□□□□ 0.11
ARHGEF40-208ENST00000557498 RSPH3Q86UC2 560 aa15.75■□□□□ 0.11
ARHGEF40-208ENST00000557498 SERINC5Q86VE9 423 aa15.75■□□□□ 0.11
ARHGEF40-208ENST00000557498 LRRC8AQ8IWT6 810 aa15.75■□□□□ 0.11
ARHGEF40-208ENST00000557498 TMC2Q8TDI7 906 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms